RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 DIP2AQ14689 1571 aa9.22□□□□□ -0.93
LINC00534-204ENST00000524361 XPCQ01831 940 aaPredicted RBP9.22□□□□□ -0.93
LINC00534-204ENST00000524361 ESCO1Q5FWF5 840 aa9.22□□□□□ -0.93
LINC00534-204ENST00000524361 MAMSTRQ6ZN01 415 aa9.22□□□□□ -0.93
LINC00534-204ENST00000524361 QTRT2Q9H974 415 aaKnown RBP9.22□□□□□ -0.93
LINC00534-204ENST00000524361 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
LINC00534-204ENST00000524361 HFM1A2PYH4 1435 aa9.22□□□□□ -0.93
LINC00534-204ENST00000524361 SETBP1Q9Y6X0 1596 aa9.21□□□□□ -0.93
LINC00534-204ENST00000524361 CLTCL1P53675 1640 aa9.21□□□□□ -0.93
LINC00534-204ENST00000524361 COL16A1Q07092 1604 aaPredicted RBP9.21□□□□□ -0.93
LINC00534-204ENST00000524361 IER5LQ5T953 404 aa9.21□□□□□ -0.94
LINC00534-204ENST00000524361 IFNLR1Q8IU57 520 aaPredicted RBP9.21□□□□□ -0.94
LINC00534-204ENST00000524361 UPF1Q92900 1129 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC00534-204ENST00000524361 NGLY1Q96IV0 654 aa9.21□□□□□ -0.94
LINC00534-204ENST00000524361 NEXMIFQ5QGS0 1516 aa9.21□□□□□ -0.94
LINC00534-204ENST00000524361 NRXN3Q9Y4C0 1643 aa9.2□□□□□ -0.94
LINC00534-204ENST00000524361 FOXO3O43524 673 aa9.2□□□□□ -0.94
LINC00534-204ENST00000524361 BBXQ8WY36 941 aaPredicted RBP9.2□□□□□ -0.94
LINC00534-204ENST00000524361 DCCP43146 1447 aa9.2□□□□□ -0.94
LINC00534-204ENST00000524361 ADGRL3Q9HAR2 1447 aa9.2□□□□□ -0.94
LINC00534-204ENST00000524361 C1orf167Q5SNV9 1468 aa9.2□□□□□ -0.94
LINC00534-204ENST00000524361 ASXL1Q8IXJ9 1541 aa9.2□□□□□ -0.94
LINC00534-204ENST00000524361 SEC24BO95487 1268 aa9.19□□□□□ -0.94
LINC00534-204ENST00000524361 SETD5Q9C0A6 1442 aa9.19□□□□□ -0.94
LINC00534-204ENST00000524361 AHDC1Q5TGY3 1603 aaPredicted RBP9.19□□□□□ -0.94
LINC00534-204ENST00000524361 SPHKAPQ2M3C7 1700 aa9.18□□□□□ -0.94
LINC00534-204ENST00000524361 PNPLA6Q8IY17 1366 aa9.18□□□□□ -0.94
LINC00534-204ENST00000524361 PLEKHH1Q9ULM0 1364 aa9.17□□□□□ -0.94
LINC00534-204ENST00000524361 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
LINC00534-204ENST00000524361 SAFB2Q14151 953 aaKnown RBP eCLIP9.17□□□□□ -0.949e-7■■■□□ 16.3
LINC00534-204ENST00000524361 GSE1Q14687 1217 aa9.17□□□□□ -0.94
LINC00534-204ENST00000524361 CFAP70Q5T0N1 1121 aa9.17□□□□□ -0.94
LINC00534-204ENST00000524361 USP21Q9UK80 565 aa9.17□□□□□ -0.94
LINC00534-204ENST00000524361 XRN1Q8IZH2 1706 aaKnown RBP9.17□□□□□ -0.94
LINC00534-204ENST00000524361 CCDC144AA2RUR9 1427 aa9.16□□□□□ -0.94
LINC00534-204ENST00000524361 CHRM1P11229 460 aaPredicted RBP9.16□□□□□ -0.94
LINC00534-204ENST00000524361 RBM6P78332 1123 aaKnown RBP9.16□□□□□ -0.94
LINC00534-204ENST00000524361 IRX5P78411 483 aaPredicted RBP9.16□□□□□ -0.94
LINC00534-204ENST00000524361 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
LINC00534-204ENST00000524361 SCUBE2Q9NQ36 999 aa9.16□□□□□ -0.94
LINC00534-204ENST00000524361 PTCH1Q13635 1447 aa9.14□□□□□ -0.95
LINC00534-204ENST00000524361 C14orf93Q9H972 538 aaKnown RBP9.14□□□□□ -0.95
LINC00534-204ENST00000524361 SPATA31E1Q6ZUB1 1445 aa9.14□□□□□ -0.95
LINC00534-204ENST00000524361 NPHP3Q7Z494 1330 aa9.13□□□□□ -0.95
LINC00534-204ENST00000524361 SETD1AO15047 1707 aaKnown RBP9.13□□□□□ -0.95
LINC00534-204ENST00000524361 LRPPRCP42704 1394 aaKnown RBP9.12□□□□□ -0.95
LINC00534-204ENST00000524361 ABCC11Q96J66 1382 aa9.12□□□□□ -0.95
LINC00534-204ENST00000524361 ANKRD30BQ9BXX2 1392 aa9.12□□□□□ -0.95
LINC00534-204ENST00000524361 POTEMA6NI47 508 aa9.12□□□□□ -0.95
LINC00534-204ENST00000524361 LMOD2Q6P5Q4 547 aa9.12□□□□□ -0.95
LINC00534-204ENST00000524361 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
LINC00534-204ENST00000524361 KRT28Q7Z3Y7 464 aa9.12□□□□□ -0.95
LINC00534-204ENST00000524361 FNBP4Q8N3X1 1017 aaPredicted RBP9.12□□□□□ -0.95
LINC00534-204ENST00000524361 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
LINC00534-204ENST00000524361 SPOCK2Q92563 424 aa9.12□□□□□ -0.95
LINC00534-204ENST00000524361 PRAM1Q96QH2 718 aa9.12□□□□□ -0.95
LINC00534-204ENST00000524361 TRPC5Q9UL62 973 aaPredicted RBP9.12□□□□□ -0.95
LINC00534-204ENST00000524361 SHPRHQ149N8 1683 aa9.11□□□□□ -0.95
LINC00534-204ENST00000524361 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
LINC00534-204ENST00000524361 PMFBP1Q8TBY8 1022 aa9.11□□□□□ -0.95
LINC00534-204ENST00000524361 HIRIP3Q9BW71 556 aaPredicted RBP9.11□□□□□ -0.95
LINC00534-204ENST00000524361 POGKQ9P215 609 aa9.11□□□□□ -0.95
LINC00534-204ENST00000524361 TRAK1Q9UPV9 953 aa9.11□□□□□ -0.95
LINC00534-204ENST00000524361 RGS12O14924 1447 aa9.11□□□□□ -0.95
LINC00534-204ENST00000524361 NALCNQ8IZF0 1738 aa9.11□□□□□ -0.95
LINC00534-204ENST00000524361 PLCG2P16885 1265 aa9.1□□□□□ -0.95
LINC00534-204ENST00000524361 PHF8Q9UPP1 1060 aa9.1□□□□□ -0.95
LINC00534-204ENST00000524361 YTHDC2Q9H6S0 1430 aaKnown RBP9.1□□□□□ -0.95
LINC00534-204ENST00000524361 RAB3GAP2Q9H2M9 1393 aa9.1□□□□□ -0.95
LINC00534-204ENST00000524361 KIF1BO60333 1816 aa9.1□□□□□ -0.95
LINC00534-204ENST00000524361 PSME1Q06323 249 aa9.09□□□□□ -0.95
LINC00534-204ENST00000524361 TMEM132AQ24JP5 1023 aa9.09□□□□□ -0.95
LINC00534-204ENST00000524361 ZNF467Q7Z7K2 595 aaPredicted RBP9.09□□□□□ -0.95
LINC00534-204ENST00000524361 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
LINC00534-204ENST00000524361 SIRT1Q96EB6 747 aa9.09□□□□□ -0.95
LINC00534-204ENST00000524361 FAM163AQ96GL9 167 aaPredicted RBP9.09□□□□□ -0.95
LINC00534-204ENST00000524361 DHX57Q6P158 1386 aaKnown RBP9.09□□□□□ -0.95
LINC00534-204ENST00000524361 NHSL1Q5SYE7 1610 aa9.09□□□□□ -0.95
LINC00534-204ENST00000524361 SPATA31A3Q5VYP0 1347 aa9.08□□□□□ -0.96
LINC00534-204ENST00000524361 PIK3C2GO75747 1445 aa9.08□□□□□ -0.96
LINC00534-204ENST00000524361 GJD4Q96KN9 370 aaPredicted RBP9.08□□□□□ -0.96
LINC00534-204ENST00000524361 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
LINC00534-204ENST00000524361 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
LINC00534-204ENST00000524361 PRAG1Q86YV5 1406 aa9.07□□□□□ -0.96
LINC00534-204ENST00000524361 CFAP44Q96MT7 982 aa9.07□□□□□ -0.96
LINC00534-204ENST00000524361 CCDC9Q9Y3X0 531 aaKnown RBP9.07□□□□□ -0.96
LINC00534-204ENST00000524361 BCL9LQ86UU0 1499 aa9.07□□□□□ -0.96
LINC00534-204ENST00000524361 PXDNQ92626 1479 aa9.07□□□□□ -0.96
LINC00534-204ENST00000524361 CDK12Q9NYV4 1490 aaPredicted RBP9.07□□□□□ -0.96
LINC00534-204ENST00000524361 TECPR2O15040 1411 aa9.06□□□□□ -0.96
LINC00534-204ENST00000524361 NBR1Q14596 966 aa9.06□□□□□ -0.96
LINC00534-204ENST00000524361 UNC5CLQ8IV45 518 aa9.06□□□□□ -0.96
LINC00534-204ENST00000524361 ATRNO75882 1429 aa9.05□□□□□ -0.96
LINC00534-204ENST00000524361 PPLO60437 1756 aa9.05□□□□□ -0.96
LINC00534-204ENST00000524361 MYOM2P54296 1465 aa9.05□□□□□ -0.96
LINC00534-204ENST00000524361 FAM83GA6ND36 823 aa9.05□□□□□ -0.96
LINC00534-204ENST00000524361 PSEN1P49768 467 aa9.05□□□□□ -0.96
LINC00534-204ENST00000524361 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
LINC00534-204ENST00000524361 ATAD2Q6PL18 1390 aa9.04□□□□□ -0.96
LINC00534-204ENST00000524361 PDCD7Q8N8D1 485 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms