RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
PABPC1-220ENST00000522658 CFDP1Q9UEE9 299 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-220ENST00000522658 MYO3AQ8NEV4 1616 aa10.02□□□□□ -0.81
PABPC1-220ENST00000522658 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.81
PABPC1-220ENST00000522658 GGT6Q6P531 493 aa10.01□□□□□ -0.81
PABPC1-220ENST00000522658 TTC13Q8NBP0 860 aa10.01□□□□□ -0.81
PABPC1-220ENST00000522658 IRX2Q9BZI1 471 aaPredicted RBP10.01□□□□□ -0.81
PABPC1-220ENST00000522658 A2MP01023 1474 aa10.01□□□□□ -0.81
PABPC1-220ENST00000522658 ZNF142P52746 1687 aaPredicted RBP10.01□□□□□ -0.81
PABPC1-220ENST00000522658 CEP170BQ9Y4F5 1589 aaPredicted RBP10.01□□□□□ -0.81
PABPC1-220ENST00000522658 ZMYM3Q14202 1370 aa10.01□□□□□ -0.81
PABPC1-220ENST00000522658 PLA2R1Q13018 1463 aa10□□□□□ -0.81
PABPC1-220ENST00000522658 ILDR2Q71H61 639 aa10□□□□□ -0.81
PABPC1-220ENST00000522658 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
PABPC1-220ENST00000522658 PNMA3Q9UL41 463 aa10□□□□□ -0.81
PABPC1-220ENST00000522658 LTBP4Q8N2S1 1624 aa10□□□□□ -0.81
PABPC1-220ENST00000522658 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
PABPC1-220ENST00000522658 HNRNPMP52272 730 aaKnown RBP eCLIP9.99□□□□□ -0.81
PABPC1-220ENST00000522658 PPP4CP60510 307 aa9.99□□□□□ -0.81
PABPC1-220ENST00000522658 INO80Q9ULG1 1556 aaPredicted RBP9.99□□□□□ -0.81
PABPC1-220ENST00000522658 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
PABPC1-220ENST00000522658 ADGBQ8N7X0 1667 aa9.98□□□□□ -0.81
PABPC1-220ENST00000522658 ZNF335Q9H4Z2 1342 aaPredicted RBP9.98□□□□□ -0.81
PABPC1-220ENST00000522658 GPATCH8Q9UKJ3 1502 aaKnown RBP9.97□□□□□ -0.81
PABPC1-220ENST00000522658 PLXNC1O60486 1568 aa9.97□□□□□ -0.81
PABPC1-220ENST00000522658 TJAP1Q5JTD0 557 aa9.97□□□□□ -0.81
PABPC1-220ENST00000522658 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
PABPC1-220ENST00000522658 EHBP1L1Q8N3D4 1523 aa9.97□□□□□ -0.81
PABPC1-220ENST00000522658 A2ML1A8K2U0 1454 aa9.95□□□□□ -0.82
PABPC1-220ENST00000522658 TCOF1Q13428 1488 aaKnown RBP9.94□□□□□ -0.82
PABPC1-220ENST00000522658 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
PABPC1-220ENST00000522658 PIP4K2BP78356 416 aa9.94□□□□□ -0.82
PABPC1-220ENST00000522658 TSHZ2Q9NRE2 1034 aa9.94□□□□□ -0.82
PABPC1-220ENST00000522658 KDM5DQ9BY66 1539 aa9.93□□□□□ -0.82
PABPC1-220ENST00000522658 TNRQ92752 1358 aa9.93□□□□□ -0.82
PABPC1-220ENST00000522658 TOM1O60784 492 aa9.93□□□□□ -0.82
PABPC1-220ENST00000522658 PADI6Q6TGC4 694 aa9.93□□□□□ -0.82
PABPC1-220ENST00000522658 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
PABPC1-220ENST00000522658 POLR1AO95602 1720 aaPredicted RBP9.93□□□□□ -0.82
PABPC1-220ENST00000522658 TIAM1Q13009 1591 aa9.92□□□□□ -0.82
PABPC1-220ENST00000522658 CPS1P31327 1500 aa9.92□□□□□ -0.82
PABPC1-220ENST00000522658 FAM135AQ9P2D6 1515 aa9.92□□□□□ -0.82
PABPC1-220ENST00000522658 CCDC141Q6ZP82 1450 aa9.91□□□□□ -0.82
PABPC1-220ENST00000522658 RTEL1-TNFRSF6BF6WH68 1400 aa9.91□□□□□ -0.82
PABPC1-220ENST00000522658 KIF3BO15066 747 aa9.91□□□□□ -0.82
PABPC1-220ENST00000522658 MLLT3P42568 568 aaPredicted RBP9.91□□□□□ -0.82
PABPC1-220ENST00000522658 KCNV2Q8TDN2 545 aa9.91□□□□□ -0.82
PABPC1-220ENST00000522658 MTRQ99707 1265 aa9.91□□□□□ -0.82
PABPC1-220ENST00000522658 DNMT1P26358 1616 aaKnown RBP9.91□□□□□ -0.82
PABPC1-220ENST00000522658 WASHC2CQ9Y4E1 1318 aa9.9□□□□□ -0.82
PABPC1-220ENST00000522658 PZPP20742 1482 aa9.9□□□□□ -0.83
PABPC1-220ENST00000522658 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
PABPC1-220ENST00000522658 APLP1P51693 650 aa9.89□□□□□ -0.83
PABPC1-220ENST00000522658 ANKLE2Q86XL3 938 aa9.89□□□□□ -0.83
PABPC1-220ENST00000522658 EYA1Q99502 592 aa9.89□□□□□ -0.83
PABPC1-220ENST00000522658 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
PABPC1-220ENST00000522658 CEP162Q5TB80 1403 aa9.89□□□□□ -0.83
PABPC1-220ENST00000522658 MED1Q15648 1581 aaPredicted RBP9.88□□□□□ -0.83
PABPC1-220ENST00000522658 CAMSAP2Q08AD1 1489 aa9.88□□□□□ -0.83
PABPC1-220ENST00000522658 NLRP1Q9C000 1473 aa9.88□□□□□ -0.83
PABPC1-220ENST00000522658 TSPY4P0CV99 314 aa9.88□□□□□ -0.83
PABPC1-220ENST00000522658 TSPY10P0CW01 314 aa9.88□□□□□ -0.83
PABPC1-220ENST00000522658 SWT1Q5T5J6 900 aaKnown RBP9.88□□□□□ -0.83
PABPC1-220ENST00000522658 THEMISQ8N1K5 641 aaPredicted RBP9.88□□□□□ -0.83
PABPC1-220ENST00000522658 UGGT1Q9NYU2 1555 aa9.88□□□□□ -0.83
PABPC1-220ENST00000522658 SHANK2Q9UPX8 1470 aa9.87□□□□□ -0.83
PABPC1-220ENST00000522658 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
PABPC1-220ENST00000522658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.87□□□□□ -0.83
PABPC1-220ENST00000522658 ZNF644Q9H582 1327 aaPredicted RBP9.86□□□□□ -0.83
PABPC1-220ENST00000522658 NPHP4O75161 1426 aaPredicted RBP9.86□□□□□ -0.83
PABPC1-220ENST00000522658 HSPA1LP34931 641 aa9.86□□□□□ -0.83
PABPC1-220ENST00000522658 HDGFP51858 240 aaKnown RBP9.86□□□□□ -0.83
PABPC1-220ENST00000522658 ZNF516Q92618 1163 aa9.86□□□□□ -0.83
PABPC1-220ENST00000522658 MBD5Q9P267 1494 aa9.85□□□□□ -0.83
PABPC1-220ENST00000522658 PTGDRQ13258 359 aa9.85□□□□□ -0.83
PABPC1-220ENST00000522658 NCOA2Q15596 1464 aa9.85□□□□□ -0.83
PABPC1-220ENST00000522658 NEURL4Q96JN8 1562 aa9.84□□□□□ -0.83
PABPC1-220ENST00000522658 ZC3H13Q5T200 1668 aaKnown RBP9.84□□□□□ -0.83
PABPC1-220ENST00000522658 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
PABPC1-220ENST00000522658 RNF40O75150 1001 aa9.84□□□□□ -0.83
PABPC1-220ENST00000522658 SYNMO15061 1565 aa9.84□□□□□ -0.83
PABPC1-220ENST00000522658 IQGAP1P46940 1657 aa9.83□□□□□ -0.84
PABPC1-220ENST00000522658 DEPDC5O75140 1603 aa9.83□□□□□ -0.84
PABPC1-220ENST00000522658 RNF17Q9BXT8 1623 aaKnown RBP9.83□□□□□ -0.84
PABPC1-220ENST00000522658 FBXO31Q5XUX0 539 aaPredicted RBP9.83□□□□□ -0.84
PABPC1-220ENST00000522658 PPP1R18Q6NYC8 613 aa9.83□□□□□ -0.84
PABPC1-220ENST00000522658 SLF2Q8IX21 1173 aa9.83□□□□□ -0.84
PABPC1-220ENST00000522658 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
PABPC1-220ENST00000522658 ARHGEF5Q12774 1597 aa9.82□□□□□ -0.84
PABPC1-220ENST00000522658 VWDEQ8N2E2 1590 aa9.8□□□□□ -0.84
PABPC1-220ENST00000522658 NKX2-3Q8TAU0 364 aa9.8□□□□□ -0.84
PABPC1-220ENST00000522658 EIF2AK4Q9P2K8 1649 aaKnown RBP9.8□□□□□ -0.84
PABPC1-220ENST00000522658 MED14O60244 1454 aa9.79□□□□□ -0.84
PABPC1-220ENST00000522658 ERVK-7P63135 1459 aa9.79□□□□□ -0.84
PABPC1-220ENST00000522658 ABCC3O15438 1527 aa9.79□□□□□ -0.84
PABPC1-220ENST00000522658 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
PABPC1-220ENST00000522658 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.79□□□□□ -0.84
PABPC1-220ENST00000522658 EID1Q9Y6B2 187 aa9.79□□□□□ -0.84
PABPC1-220ENST00000522658 LCE2BO14633 110 aa9.78□□□□□ -0.84
PABPC1-220ENST00000522658 Q6ZNB5 142 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms