RNA–Protein interactions for RNA: ENST00000519445.5

KCNQ3-202, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ3, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-202ENST00000519445 NUTM2FA1L443 756 aa29.74■■■□□ 2.35
KCNQ3-202ENST00000519445 RARSP54136 660 aaKnown RBP29.73■■■□□ 2.35
KCNQ3-202ENST00000519445 ARHGAP31Q2M1Z3 1444 aa29.72■■■□□ 2.35
KCNQ3-202ENST00000519445 TXNDC2Q86VQ3 553 aa29.72■■■□□ 2.35
KCNQ3-202ENST00000519445 PANK2Q9BZ23 570 aa29.72■■■□□ 2.35
KCNQ3-202ENST00000519445 SLKQ9H2G2 1235 aaPredicted RBP29.72■■■□□ 2.35
KCNQ3-202ENST00000519445 PREX1Q8TCU6 1659 aa29.7■■■□□ 2.34
KCNQ3-202ENST00000519445 PTPRMP28827 1452 aa29.69■■■□□ 2.34
KCNQ3-202ENST00000519445 C8orf34Q49A92 452 aa29.69■■■□□ 2.34
KCNQ3-202ENST00000519445 L1TD1Q5T7N2 865 aaKnown RBP29.69■■■□□ 2.34
KCNQ3-202ENST00000519445 TMEM131LA2VDJ0 1609 aa29.69■■■□□ 2.34
KCNQ3-202ENST00000519445 FAM161AQ3B820 660 aa29.67■■■□□ 2.34
KCNQ3-202ENST00000519445 TERF2IPQ9NYB0 399 aa29.67■■■□□ 2.34
KCNQ3-202ENST00000519445 GZF1Q9H116 711 aaPredicted RBP29.66■■■□□ 2.34
KCNQ3-202ENST00000519445 XRCC6P12956 609 aaKnown RBP eCLIP29.66■■■□□ 2.34
KCNQ3-202ENST00000519445 CLCN1P35523 988 aa29.66■■■□□ 2.34
KCNQ3-202ENST00000519445 HMOX1P09601 288 aa29.65■■■□□ 2.34
KCNQ3-202ENST00000519445 RIMBP3CA6NJZ7 1639 aa29.65■■■□□ 2.34
KCNQ3-202ENST00000519445 RIMBP3BA6NNM3 1639 aa29.65■■■□□ 2.34
KCNQ3-202ENST00000519445 RIMBP3Q9UFD9 1639 aa29.65■■■□□ 2.34
KCNQ3-202ENST00000519445 ABCC11Q96J66 1382 aa29.63■■■□□ 2.33
KCNQ3-202ENST00000519445 EXOSC9Q06265 439 aaKnown RBP29.63■■■□□ 2.33
KCNQ3-202ENST00000519445 THUMPD2Q9BTF0 503 aaKnown RBP29.63■■■□□ 2.33
KCNQ3-202ENST00000519445 PCDHB15Q9Y5E8 787 aa29.63■■■□□ 2.33
KCNQ3-202ENST00000519445 RBM10P98175 930 aaKnown RBP29.62■■■□□ 2.33
KCNQ3-202ENST00000519445 HDGFL2Q7Z4V5 671 aaPredicted RBP29.62■■■□□ 2.33
KCNQ3-202ENST00000519445 CD163L1Q9NR16 1453 aa29.61■■■□□ 2.33
KCNQ3-202ENST00000519445 TMPOP42166 694 aaKnown RBP29.61■■■□□ 2.33
KCNQ3-202ENST00000519445 PHF23Q9BUL5 403 aaPredicted RBP29.61■■■□□ 2.33
KCNQ3-202ENST00000519445 IQSEC2Q5JU85 1478 aa29.6■■■□□ 2.33
KCNQ3-202ENST00000519445 ESF1Q9H501 851 aaKnown RBP29.6■■■□□ 2.33
KCNQ3-202ENST00000519445 TRIM35Q9UPQ4 493 aa29.6■■■□□ 2.33
KCNQ3-202ENST00000519445 RIPK4P57078 832 aa29.6■■■□□ 2.33
KCNQ3-202ENST00000519445 NME9Q86XW9 330 aa29.6■■■□□ 2.33
KCNQ3-202ENST00000519445 EMILIN1Q9Y6C2 1016 aa29.6■■■□□ 2.33
KCNQ3-202ENST00000519445 ALKQ9UM73 1620 aa29.6■■■□□ 2.33
KCNQ3-202ENST00000519445 PLEKHF1Q96S99 279 aa29.59■■■□□ 2.33
KCNQ3-202ENST00000519445 MAPK8IP3Q9UPT6 1336 aa29.59■■■□□ 2.33
KCNQ3-202ENST00000519445 WDR63Q8IWG1 891 aa29.57■■■□□ 2.32
KCNQ3-202ENST00000519445 DIP2BQ9P265 1576 aa29.57■■■□□ 2.32
KCNQ3-202ENST00000519445 METP08581 1390 aa29.57■■■□□ 2.32
KCNQ3-202ENST00000519445 DIAPH1O60610 1272 aaKnown RBP29.57■■■□□ 2.32
KCNQ3-202ENST00000519445 CLTCQ00610 1675 aaKnown RBP29.56■■■□□ 2.32
KCNQ3-202ENST00000519445 SOX12O15370 315 aa29.56■■■□□ 2.32
KCNQ3-202ENST00000519445 CEBPAP49715 358 aaPredicted RBP29.56■■■□□ 2.32
KCNQ3-202ENST00000519445 RIMS2Q9UQ26 1411 aa29.56■■■□□ 2.32
KCNQ3-202ENST00000519445 ATAD2Q6PL18 1390 aa29.55■■■□□ 2.32
KCNQ3-202ENST00000519445 RRS1Q15050 365 aaKnown RBP29.55■■■□□ 2.32
KCNQ3-202ENST00000519445 ZFYVE9O95405 1425 aa29.55■■■□□ 2.32
KCNQ3-202ENST00000519445 GOLGA6L3A6NEY3 463 aa29.55■■■□□ 2.32
KCNQ3-202ENST00000519445 PDE3AQ14432 1141 aa29.55■■■□□ 2.32
KCNQ3-202ENST00000519445 SEC24BO95487 1268 aa29.54■■■□□ 2.32
KCNQ3-202ENST00000519445 SMC4Q9NTJ3 1288 aa29.54■■■□□ 2.32
KCNQ3-202ENST00000519445 ELL2O00472 640 aaPredicted RBP29.53■■■□□ 2.32
KCNQ3-202ENST00000519445 PHACTR3Q96KR7 559 aa29.53■■■□□ 2.32
KCNQ3-202ENST00000519445 PRKAR2BP31323 418 aa29.53■■■□□ 2.32
KCNQ3-202ENST00000519445 POLKQ9UBT6 870 aa29.52■■■□□ 2.32
KCNQ3-202ENST00000519445 A2ML1A8K2U0 1454 aa29.52■■■□□ 2.32
KCNQ3-202ENST00000519445 PUS7Q96PZ0 661 aaKnown RBP29.52■■■□□ 2.32
KCNQ3-202ENST00000519445 MYH16Q9H6N6 1097 aa29.52■■■□□ 2.32
KCNQ3-202ENST00000519445 SSH1Q8WYL5 1049 aa29.51■■■□□ 2.31
KCNQ3-202ENST00000519445 NGEFQ8N5V2 710 aa29.5■■■□□ 2.31
KCNQ3-202ENST00000519445 NSD2O96028 1365 aa29.5■■■□□ 2.31
KCNQ3-202ENST00000519445 FTSJ3Q8IY81 847 aaKnown RBP29.49■■■□□ 2.31
KCNQ3-202ENST00000519445 ARHGEF40Q8TER5 1519 aa29.48■■■□□ 2.31
KCNQ3-202ENST00000519445 NLRP1Q9C000 1473 aa29.48■■■□□ 2.31
KCNQ3-202ENST00000519445 ZMYM3Q14202 1370 aa29.46■■■□□ 2.31
KCNQ3-202ENST00000519445 CCDC27Q2M243 656 aa29.46■■■□□ 2.31
KCNQ3-202ENST00000519445 SPRYD3Q8NCJ5 442 aa29.46■■■□□ 2.31
KCNQ3-202ENST00000519445 SLC26A8Q96RN1 970 aa29.44■■■□□ 2.3
KCNQ3-202ENST00000519445 ERBB4Q15303 1308 aa29.44■■■□□ 2.3
KCNQ3-202ENST00000519445 WASLO00401 505 aaPredicted RBP29.44■■■□□ 2.3
KCNQ3-202ENST00000519445 ITPRIPQ8IWB1 547 aa29.44■■■□□ 2.3
KCNQ3-202ENST00000519445 NOB1Q9ULX3 412 aaKnown RBP29.44■■■□□ 2.3
KCNQ3-202ENST00000519445 USP32Q8NFA0 1604 aa29.44■■■□□ 2.3
KCNQ3-202ENST00000519445 TRIM27P14373 513 aa29.44■■■□□ 2.3
KCNQ3-202ENST00000519445 NUDT16Q96DE0 195 aaKnown RBP29.44■■■□□ 2.3
KCNQ3-202ENST00000519445 COL3A1P02461 1466 aaPredicted RBP29.42■■■□□ 2.3
KCNQ3-202ENST00000519445 DCTN1Q14203 1278 aa29.41■■■□□ 2.3
KCNQ3-202ENST00000519445 PDZRN3Q9UPQ7 1066 aa29.41■■■□□ 2.3
KCNQ3-202ENST00000519445 FAM83GA6ND36 823 aa29.41■■■□□ 2.3
KCNQ3-202ENST00000519445 AAMPQ13685 434 aa29.4■■■□□ 2.3
KCNQ3-202ENST00000519445 ZKSCAN2Q63HK3 967 aa29.4■■■□□ 2.3
KCNQ3-202ENST00000519445 DZIP1LQ8IYY4 767 aaKnown RBP29.4■■■□□ 2.3
KCNQ3-202ENST00000519445 PPIP5K1Q6PFW1 1433 aa29.39■■■□□ 2.3
KCNQ3-202ENST00000519445 ESPNB1AK53 854 aa29.38■■■□□ 2.29
KCNQ3-202ENST00000519445 PRDM4Q9UKN5 801 aa29.38■■■□□ 2.29
KCNQ3-202ENST00000519445 MVPQ14764 893 aaKnown RBP29.38■■■□□ 2.29
KCNQ3-202ENST00000519445 TSPYL6Q8N831 410 aa29.37■■■□□ 2.29
KCNQ3-202ENST00000519445 NINLQ9Y2I6 1382 aa29.37■■■□□ 2.29
KCNQ3-202ENST00000519445 PDCL3Q9H2J4 239 aa29.36■■■□□ 2.29
KCNQ3-202ENST00000519445 LTKP29376 864 aa29.35■■■□□ 2.29
KCNQ3-202ENST00000519445 TMEM57Q8N5G2 664 aa29.35■■■□□ 2.29
KCNQ3-202ENST00000519445 PRR36Q9H6K5 1346 aa29.35■■■□□ 2.29
KCNQ3-202ENST00000519445 FSD2A1L4K1 749 aa29.35■■■□□ 2.29
KCNQ3-202ENST00000519445 USP19O94966 1318 aa29.35■■■□□ 2.29
KCNQ3-202ENST00000519445 ARID3AQ99856 593 aa29.33■■■□□ 2.29
KCNQ3-202ENST00000519445 BECN1Q14457 450 aa29.32■■■□□ 2.28
KCNQ3-202ENST00000519445 AEBP1Q8IUX7 1158 aa29.32■■■□□ 2.28
KCNQ3-202ENST00000519445 C1orf115Q9H7X2 142 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms