RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
MTCL1-207ENST00000518815 ANKRD36BQ8N2N9 1353 aa12.88□□□□□ -0.35
MTCL1-207ENST00000518815 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
MTCL1-207ENST00000518815 YTHDC2Q9H6S0 1430 aaKnown RBP12.87□□□□□ -0.35
MTCL1-207ENST00000518815 ZNF142P52746 1687 aaPredicted RBP12.87□□□□□ -0.35
MTCL1-207ENST00000518815 MINK1Q8N4C8 1332 aaPredicted RBP12.87□□□□□ -0.35
MTCL1-207ENST00000518815 PLEKHG1Q9ULL1 1385 aa12.87□□□□□ -0.35
MTCL1-207ENST00000518815 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
MTCL1-207ENST00000518815 MTHFSP49914 203 aa12.87□□□□□ -0.35
MTCL1-207ENST00000518815 PMFBP1Q8TBY8 1022 aa12.86□□□□□ -0.35
MTCL1-207ENST00000518815 SIRT1Q96EB6 747 aa12.86□□□□□ -0.35
MTCL1-207ENST00000518815 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
MTCL1-207ENST00000518815 KNDC1Q76NI1 1749 aa12.86□□□□□ -0.35
MTCL1-207ENST00000518815 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
MTCL1-207ENST00000518815 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
MTCL1-207ENST00000518815 DIP2AQ14689 1571 aa12.85□□□□□ -0.35
MTCL1-207ENST00000518815 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
MTCL1-207ENST00000518815 WWC1Q8IX03 1113 aa12.85□□□□□ -0.35
MTCL1-207ENST00000518815 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
MTCL1-207ENST00000518815 ABCC11Q96J66 1382 aa12.85□□□□□ -0.35
MTCL1-207ENST00000518815 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
MTCL1-207ENST00000518815 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
MTCL1-207ENST00000518815 TRMT2AQ8IZ69 625 aaKnown RBP12.84□□□□□ -0.35
MTCL1-207ENST00000518815 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
MTCL1-207ENST00000518815 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
MTCL1-207ENST00000518815 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
MTCL1-207ENST00000518815 PTPRMP28827 1452 aa12.83□□□□□ -0.36
MTCL1-207ENST00000518815 TECPR2O15040 1411 aa12.83□□□□□ -0.36
MTCL1-207ENST00000518815 FAM135BQ49AJ0 1406 aa12.82□□□□□ -0.36
MTCL1-207ENST00000518815 TXNDC2Q86VQ3 553 aa12.81□□□□□ -0.36
MTCL1-207ENST00000518815 CHMP4BQ9H444 224 aaKnown RBP12.81□□□□□ -0.36
MTCL1-207ENST00000518815 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
MTCL1-207ENST00000518815 RWDD1Q9H446 243 aaPredicted RBP12.81□□□□□ -0.36
MTCL1-207ENST00000518815 MYOM1P52179 1685 aa12.81□□□□□ -0.36
MTCL1-207ENST00000518815 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
MTCL1-207ENST00000518815 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
MTCL1-207ENST00000518815 C20orf194Q5TEA3 1177 aa12.8□□□□□ -0.36
MTCL1-207ENST00000518815 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
MTCL1-207ENST00000518815 USP35Q9P2H5 1018 aa12.8□□□□□ -0.36
MTCL1-207ENST00000518815 MED14O60244 1454 aa12.8□□□□□ -0.36
MTCL1-207ENST00000518815 CPS1P31327 1500 aa12.8□□□□□ -0.36
MTCL1-207ENST00000518815 PRAM1Q96QH2 718 aa12.79□□□□□ -0.36
MTCL1-207ENST00000518815 IPO8O15397 1037 aaKnown RBP12.79□□□□□ -0.36
MTCL1-207ENST00000518815 TBX22Q9Y458 520 aa12.79□□□□□ -0.36
MTCL1-207ENST00000518815 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
MTCL1-207ENST00000518815 PIK3R4Q99570 1358 aa12.79□□□□□ -0.36
MTCL1-207ENST00000518815 BCAR3O75815 825 aa12.79□□□□□ -0.36
MTCL1-207ENST00000518815 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
MTCL1-207ENST00000518815 BECN1Q14457 450 aa12.78□□□□□ -0.36
MTCL1-207ENST00000518815 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
MTCL1-207ENST00000518815 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
MTCL1-207ENST00000518815 IL27Q8NEV9 243 aa12.77□□□□□ -0.36
MTCL1-207ENST00000518815 TULP4Q9NRJ4 1543 aa12.77□□□□□ -0.37
MTCL1-207ENST00000518815 COG6Q9Y2V7 657 aa12.77□□□□□ -0.37
MTCL1-207ENST00000518815 LTKP29376 864 aa12.77□□□□□ -0.37
MTCL1-207ENST00000518815 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
MTCL1-207ENST00000518815 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
MTCL1-207ENST00000518815 ANKLE2Q86XL3 938 aa12.76□□□□□ -0.37
MTCL1-207ENST00000518815 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
MTCL1-207ENST00000518815 METP08581 1390 aa12.75□□□□□ -0.37
MTCL1-207ENST00000518815 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
MTCL1-207ENST00000518815 USP32Q8NFA0 1604 aa12.75□□□□□ -0.37
MTCL1-207ENST00000518815 RARSP54136 660 aaKnown RBP12.75□□□□□ -0.37
MTCL1-207ENST00000518815 SMC4Q9NTJ3 1288 aa12.75□□□□□ -0.37
MTCL1-207ENST00000518815 BCL2L13Q9BXK5 485 aa12.74□□□□□ -0.37
MTCL1-207ENST00000518815 IL16Q14005 1332 aa12.74□□□□□ -0.37
MTCL1-207ENST00000518815 LMOD3Q0VAK6 560 aa12.74□□□□□ -0.37
MTCL1-207ENST00000518815 PTCH1Q13635 1447 aa12.73□□□□□ -0.37
MTCL1-207ENST00000518815 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
MTCL1-207ENST00000518815 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
MTCL1-207ENST00000518815 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
MTCL1-207ENST00000518815 A0A1W2PP64 1363 aa12.73□□□□□ -0.37
MTCL1-207ENST00000518815 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
MTCL1-207ENST00000518815 KIF16BQ96L93 1317 aa12.72□□□□□ -0.37
MTCL1-207ENST00000518815 ELL2O00472 640 aaPredicted RBP12.72□□□□□ -0.37
MTCL1-207ENST00000518815 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
MTCL1-207ENST00000518815 APBB1O00213 710 aa12.72□□□□□ -0.37
MTCL1-207ENST00000518815 AMPHP49418 695 aa12.71□□□□□ -0.37
MTCL1-207ENST00000518815 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
MTCL1-207ENST00000518815 FCHSD2O94868 740 aa12.71□□□□□ -0.37
MTCL1-207ENST00000518815 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
MTCL1-207ENST00000518815 RIPK4P57078 832 aa12.71□□□□□ -0.37
MTCL1-207ENST00000518815 CABP1Q9NZU7 370 aa12.71□□□□□ -0.38
MTCL1-207ENST00000518815 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
MTCL1-207ENST00000518815 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
MTCL1-207ENST00000518815 FYB1O15117 783 aa12.69□□□□□ -0.38
MTCL1-207ENST00000518815 CSB-PGBD3P0DP91 1061 aa12.69□□□□□ -0.38
MTCL1-207ENST00000518815 MVPQ14764 893 aaKnown RBP12.69□□□□□ -0.38
MTCL1-207ENST00000518815 COG3Q96JB2 828 aa12.69□□□□□ -0.38
MTCL1-207ENST00000518815 PHF23Q9BUL5 403 aaPredicted RBP12.69□□□□□ -0.38
MTCL1-207ENST00000518815 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
MTCL1-207ENST00000518815 ATP7BP35670 1465 aa12.68□□□□□ -0.38
MTCL1-207ENST00000518815 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
MTCL1-207ENST00000518815 PRKCSHP14314 528 aaPredicted RBP12.67□□□□□ -0.38
MTCL1-207ENST00000518815 NPHP4O75161 1426 aaPredicted RBP12.67□□□□□ -0.38
MTCL1-207ENST00000518815 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
MTCL1-207ENST00000518815 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
MTCL1-207ENST00000518815 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
MTCL1-207ENST00000518815 AMOTL2Q9Y2J4 779 aa12.67□□□□□ -0.38
MTCL1-207ENST00000518815 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms