RNA–Protein interactions for RNA: ENST00000515725.5

COPG1-210, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-210ENST00000515725 ADGRB1O14514 1584 aa11.92□□□□□ -0.5
COPG1-210ENST00000515725 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
COPG1-210ENST00000515725 REREQ9P2R6 1566 aa11.92□□□□□ -0.5
COPG1-210ENST00000515725 PPLO60437 1756 aa11.92□□□□□ -0.5
COPG1-210ENST00000515725 PRKAR2BP31323 418 aa11.92□□□□□ -0.5
COPG1-210ENST00000515725 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
COPG1-210ENST00000515725 TCP11L2Q8N4U5 519 aa11.92□□□□□ -0.5
COPG1-210ENST00000515725 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
COPG1-210ENST00000515725 SETD1BQ9UPS6 1966 aaKnown RBP11.91□□□□□ -0.5
COPG1-210ENST00000515725 FRAT1Q92837 279 aaPredicted RBP11.91□□□□□ -0.5
COPG1-210ENST00000515725 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
COPG1-210ENST00000515725 CEP170BQ9Y4F5 1589 aaPredicted RBP11.9□□□□□ -0.5
COPG1-210ENST00000515725 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
COPG1-210ENST00000515725 AEBP1Q8IUX7 1158 aa11.9□□□□□ -0.5
COPG1-210ENST00000515725 PARD3Q8TEW0 1356 aa11.9□□□□□ -0.5
COPG1-210ENST00000515725 ASXL1Q8IXJ9 1541 aa11.9□□□□□ -0.5
COPG1-210ENST00000515725 STRN4Q9NRL3 753 aa11.9□□□□□ -0.51
COPG1-210ENST00000515725 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
COPG1-210ENST00000515725 RIPK4P57078 832 aa11.88□□□□□ -0.51
COPG1-210ENST00000515725 CCDC9Q9Y3X0 531 aaKnown RBP11.88□□□□□ -0.51
COPG1-210ENST00000515725 ADAMTS2O95450 1211 aa11.88□□□□□ -0.51
COPG1-210ENST00000515725 CADPS2Q86UW7 1296 aa11.88□□□□□ -0.51
COPG1-210ENST00000515725 NLRP2Q9NX02 1062 aa11.88□□□□□ -0.51
COPG1-210ENST00000515725 TULP4Q9NRJ4 1543 aa11.88□□□□□ -0.51
COPG1-210ENST00000515725 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
COPG1-210ENST00000515725 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
COPG1-210ENST00000515725 MSH6P52701 1360 aa11.86□□□□□ -0.51
COPG1-210ENST00000515725 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
COPG1-210ENST00000515725 QRICH2Q9H0J4 1663 aa11.86□□□□□ -0.51
COPG1-210ENST00000515725 CLUAP1Q96AJ1 413 aa11.86□□□□□ -0.51
COPG1-210ENST00000515725 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
COPG1-210ENST00000515725 SBNO2Q9Y2G9 1366 aa11.86□□□□□ -0.51
COPG1-210ENST00000515725 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
COPG1-210ENST00000515725 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
COPG1-210ENST00000515725 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
COPG1-210ENST00000515725 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
COPG1-210ENST00000515725 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
COPG1-210ENST00000515725 ZNF428Q96B54 188 aa11.84□□□□□ -0.51
COPG1-210ENST00000515725 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
COPG1-210ENST00000515725 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
COPG1-210ENST00000515725 MAP3K19Q56UN5 1328 aa11.84□□□□□ -0.51
COPG1-210ENST00000515725 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
COPG1-210ENST00000515725 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
COPG1-210ENST00000515725 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
COPG1-210ENST00000515725 RUNDC1Q96C34 613 aa11.84□□□□□ -0.51
COPG1-210ENST00000515725 IQGAP1P46940 1657 aa11.83□□□□□ -0.52
COPG1-210ENST00000515725 EVA1CP58658 441 aa11.83□□□□□ -0.52
COPG1-210ENST00000515725 PRDM11Q9NQV5 511 aa11.83□□□□□ -0.52
COPG1-210ENST00000515725 PLEKHG3A1L390 1219 aa11.82□□□□□ -0.52
COPG1-210ENST00000515725 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
COPG1-210ENST00000515725 LMTK3Q96Q04 1460 aa11.82□□□□□ -0.52
COPG1-210ENST00000515725 GCP02774 474 aa11.82□□□□□ -0.52
COPG1-210ENST00000515725 MCM10Q7L590 875 aa11.82□□□□□ -0.52
COPG1-210ENST00000515725 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
COPG1-210ENST00000515725 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
COPG1-210ENST00000515725 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
COPG1-210ENST00000515725 EIF4A2Q14240 407 aaKnown RBP11.81□□□□□ -0.52
COPG1-210ENST00000515725 RTF1Q92541 710 aaKnown RBP11.81□□□□□ -0.52
COPG1-210ENST00000515725 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
COPG1-210ENST00000515725 ARXQ96QS3 562 aa11.81□□□□□ -0.52
COPG1-210ENST00000515725 SETBP1Q9Y6X0 1596 aa11.8□□□□□ -0.52
COPG1-210ENST00000515725 FAM135BQ49AJ0 1406 aa11.8□□□□□ -0.52
COPG1-210ENST00000515725 WWC1Q8IX03 1113 aa11.79□□□□□ -0.52
COPG1-210ENST00000515725 TMPOP42166 694 aaKnown RBP11.78□□□□□ -0.52
COPG1-210ENST00000515725 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
COPG1-210ENST00000515725 PUS7Q96PZ0 661 aaKnown RBP11.78□□□□□ -0.52
COPG1-210ENST00000515725 BCAR3O75815 825 aa11.78□□□□□ -0.52
COPG1-210ENST00000515725 TOM1L2Q6ZVM7 507 aa11.78□□□□□ -0.52
COPG1-210ENST00000515725 ARHGAP23Q9P227 1491 aa11.78□□□□□ -0.52
COPG1-210ENST00000515725 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.52
COPG1-210ENST00000515725 IFT172Q9UG01 1749 aa11.77□□□□□ -0.52
COPG1-210ENST00000515725 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.53
COPG1-210ENST00000515725 EYA1Q99502 592 aa11.77□□□□□ -0.53
COPG1-210ENST00000515725 EDC4Q6P2E9 1401 aaKnown RBP11.77□□□□□ -0.53
COPG1-210ENST00000515725 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.53
COPG1-210ENST00000515725 CCDC136Q96JN2 1154 aa11.77□□□□□ -0.53
COPG1-210ENST00000515725 NINLQ9Y2I6 1382 aa11.76□□□□□ -0.53
COPG1-210ENST00000515725 ADAMTSL3P82987 1691 aa11.76□□□□□ -0.53
COPG1-210ENST00000515725 SLIT1O75093 1534 aa11.76□□□□□ -0.53
COPG1-210ENST00000515725 USP6P35125 1406 aa11.76□□□□□ -0.53
COPG1-210ENST00000515725 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
COPG1-210ENST00000515725 ZNF330Q9Y3S2 320 aaPredicted RBP11.76□□□□□ -0.53
COPG1-210ENST00000515725 ATP7BP35670 1465 aa11.76□□□□□ -0.53
COPG1-210ENST00000515725 CPS1P31327 1500 aa11.75□□□□□ -0.53
COPG1-210ENST00000515725 HOXC9P31274 260 aa11.75□□□□□ -0.53
COPG1-210ENST00000515725 ANKRD24Q8TF21 1146 aa11.75□□□□□ -0.53
COPG1-210ENST00000515725 EXOSC9Q06265 439 aaKnown RBP11.75□□□□□ -0.53
COPG1-210ENST00000515725 KRT24Q2M2I5 525 aa11.75□□□□□ -0.53
COPG1-210ENST00000515725 MPRIPQ6WCQ1 1025 aa11.75□□□□□ -0.53
COPG1-210ENST00000515725 PNNQ9H307 717 aaKnown RBP11.75□□□□□ -0.53
COPG1-210ENST00000515725 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
COPG1-210ENST00000515725 IL13P35225 146 aa11.74□□□□□ -0.53
COPG1-210ENST00000515725 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
COPG1-210ENST00000515725 NRXN3Q9Y4C0 1643 aa11.74□□□□□ -0.53
COPG1-210ENST00000515725 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
COPG1-210ENST00000515725 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
COPG1-210ENST00000515725 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
COPG1-210ENST00000515725 NGEFQ8N5V2 710 aa11.73□□□□□ -0.53
COPG1-210ENST00000515725 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
COPG1-210ENST00000515725 SMC4Q9NTJ3 1288 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms