RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DDX17Q92841 729 aaKnown RBP10.48□□□□□ -0.73
TOPBP1-207ENST00000509162 C19orf44Q9H6X5 657 aa10.48□□□□□ -0.73
TOPBP1-207ENST00000509162 PRR36Q9H6K5 1346 aa10.48□□□□□ -0.73
TOPBP1-207ENST00000509162 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
TOPBP1-207ENST00000509162 SLAIN2Q9P270 581 aa10.47□□□□□ -0.73
TOPBP1-207ENST00000509162 KIF1AQ12756 1690 aa10.47□□□□□ -0.73
TOPBP1-207ENST00000509162 TRPM3Q9HCF6 1732 aaPredicted RBP10.47□□□□□ -0.73
TOPBP1-207ENST00000509162 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-207ENST00000509162 TRAK1Q9UPV9 953 aa10.46□□□□□ -0.73
TOPBP1-207ENST00000509162 ABCA3Q99758 1704 aa10.45□□□□□ -0.74
TOPBP1-207ENST00000509162 HAP1P54257 671 aaPredicted RBP10.45□□□□□ -0.74
TOPBP1-207ENST00000509162 SAFB2Q14151 953 aaKnown RBP eCLIP10.45□□□□□ -0.74
TOPBP1-207ENST00000509162 C14orf37Q86TY3 774 aa10.45□□□□□ -0.74
TOPBP1-207ENST00000509162 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
TOPBP1-207ENST00000509162 SIRT1Q96EB6 747 aa10.45□□□□□ -0.74
TOPBP1-207ENST00000509162 ORAI2Q96SN7 254 aa10.45□□□□□ -0.74
TOPBP1-207ENST00000509162 CCDC61Q9Y6R9 512 aa10.45□□□□□ -0.74
TOPBP1-207ENST00000509162 COL22A1Q8NFW1 1626 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-207ENST00000509162 CRYBG1Q9Y4K1 1723 aa10.44□□□□□ -0.74
TOPBP1-207ENST00000509162 ANKARQ7Z5J8 1434 aa10.43□□□□□ -0.74
TOPBP1-207ENST00000509162 TONSLQ96HA7 1378 aa10.43□□□□□ -0.74
TOPBP1-207ENST00000509162 MINK1Q8N4C8 1332 aaPredicted RBP10.43□□□□□ -0.74
TOPBP1-207ENST00000509162 RASEFQ8IZ41 740 aa10.43□□□□□ -0.74
TOPBP1-207ENST00000509162 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
TOPBP1-207ENST00000509162 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
TOPBP1-207ENST00000509162 HIRIP3Q9BW71 556 aaPredicted RBP10.43□□□□□ -0.74
TOPBP1-207ENST00000509162 PNPLA6Q8IY17 1366 aa10.42□□□□□ -0.74
TOPBP1-207ENST00000509162 NUTM2FA1L443 756 aa10.42□□□□□ -0.74
TOPBP1-207ENST00000509162 ATF3P18847 181 aa10.42□□□□□ -0.74
TOPBP1-207ENST00000509162 ITSN1Q15811 1721 aa10.41□□□□□ -0.74
TOPBP1-207ENST00000509162 ROCK2O75116 1388 aaKnown RBP10.41□□□□□ -0.74
TOPBP1-207ENST00000509162 ALS2Q96Q42 1657 aa10.41□□□□□ -0.74
TOPBP1-207ENST00000509162 NRKQ7Z2Y5 1582 aa10.41□□□□□ -0.74
TOPBP1-207ENST00000509162 SOS2Q07890 1332 aaPredicted RBP10.4□□□□□ -0.74
TOPBP1-207ENST00000509162 NUBP1P53384 320 aa10.4□□□□□ -0.74
TOPBP1-207ENST00000509162 SPOCK2Q92563 424 aa10.4□□□□□ -0.74
TOPBP1-207ENST00000509162 MARF1Q9Y4F3 1742 aaKnown RBP10.39□□□□□ -0.75
TOPBP1-207ENST00000509162 POTEMA6NI47 508 aa10.39□□□□□ -0.75
TOPBP1-207ENST00000509162 MS4A3Q96HJ5 214 aa10.39□□□□□ -0.75
TOPBP1-207ENST00000509162 JCADQ9P266 1359 aa10.39□□□□□ -0.75
TOPBP1-207ENST00000509162 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
TOPBP1-207ENST00000509162 CLSPNQ9HAW4 1339 aa10.37□□□□□ -0.75
TOPBP1-207ENST00000509162 CENPJQ9HC77 1338 aaPredicted RBP10.37□□□□□ -0.75
TOPBP1-207ENST00000509162 XPCQ01831 940 aaPredicted RBP10.37□□□□□ -0.75
TOPBP1-207ENST00000509162 BBXQ8WY36 941 aaPredicted RBP10.37□□□□□ -0.75
TOPBP1-207ENST00000509162 MYOM1P52179 1685 aa10.37□□□□□ -0.75
TOPBP1-207ENST00000509162 CD163L1Q9NR16 1453 aa10.36□□□□□ -0.75
TOPBP1-207ENST00000509162 WASLO00401 505 aaPredicted RBP10.36□□□□□ -0.75
TOPBP1-207ENST00000509162 POGKQ9P215 609 aa10.36□□□□□ -0.75
TOPBP1-207ENST00000509162 RGS17Q9UGC6 210 aaPredicted RBP10.36□□□□□ -0.75
TOPBP1-207ENST00000509162 AKAP12Q02952 1782 aa10.36□□□□□ -0.75
TOPBP1-207ENST00000509162 SBNO2Q9Y2G9 1366 aa10.36□□□□□ -0.75
TOPBP1-207ENST00000509162 PHRF1Q9P1Y6 1649 aaKnown RBP10.36□□□□□ -0.75
TOPBP1-207ENST00000509162 TNS3Q68CZ2 1445 aa10.35□□□□□ -0.75
TOPBP1-207ENST00000509162 PIK3C2AO00443 1686 aa10.34□□□□□ -0.75
TOPBP1-207ENST00000509162 MON2Q7Z3U7 1717 aa10.34□□□□□ -0.75
TOPBP1-207ENST00000509162 ESCO1Q5FWF5 840 aa10.34□□□□□ -0.75
TOPBP1-207ENST00000509162 FAM212AQ96EL1 285 aa10.34□□□□□ -0.75
TOPBP1-207ENST00000509162 TESK2Q96S53 571 aa10.34□□□□□ -0.75
TOPBP1-207ENST00000509162 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
TOPBP1-207ENST00000509162 SSH2Q76I76 1423 aa10.33□□□□□ -0.76
TOPBP1-207ENST00000509162 FOXO3O43524 673 aa10.33□□□□□ -0.76
TOPBP1-207ENST00000509162 ILDR2Q71H61 639 aa10.33□□□□□ -0.76
TOPBP1-207ENST00000509162 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
TOPBP1-207ENST00000509162 USP47Q96K76 1375 aa10.33□□□□□ -0.76
TOPBP1-207ENST00000509162 DISP3Q9P2K9 1392 aa10.33□□□□□ -0.76
TOPBP1-207ENST00000509162 PPIP5K1Q6PFW1 1433 aa10.33□□□□□ -0.76
TOPBP1-207ENST00000509162 EIF3AQ14152 1382 aaKnown RBP10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 ASTLQ6HA08 431 aaPredicted RBP10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 PMFBP1Q8TBY8 1022 aa10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 CDK19Q9BWU1 502 aa10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 CARD11Q9BXL7 1154 aa10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 NRAPQ86VF7 1730 aa10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 SPATA31A3Q5VYP0 1347 aa10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 NPHP3Q7Z494 1330 aa10.32□□□□□ -0.76
TOPBP1-207ENST00000509162 PLCH1Q4KWH8 1693 aa10.31□□□□□ -0.76
TOPBP1-207ENST00000509162 SBNO1A3KN83 1393 aa10.31□□□□□ -0.76
TOPBP1-207ENST00000509162 ECM2O94769 699 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-207ENST00000509162 POTEGQ6S5H5 508 aa10.31□□□□□ -0.76
TOPBP1-207ENST00000509162 CCER1Q8TC90 406 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-207ENST00000509162 NUDT16Q96DE0 195 aaKnown RBP10.31□□□□□ -0.76
TOPBP1-207ENST00000509162 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
TOPBP1-207ENST00000509162 USP54Q70EL1 1684 aa10.31□□□□□ -0.76
TOPBP1-207ENST00000509162 MAP3K13O43283 966 aa10.3□□□□□ -0.76
TOPBP1-207ENST00000509162 KLHL34Q8N239 644 aa10.3□□□□□ -0.76
TOPBP1-207ENST00000509162 SPATA31A6Q5VVP1 1343 aa10.3□□□□□ -0.76
TOPBP1-207ENST00000509162 PCDH10Q9P2E7 1040 aa10.29□□□□□ -0.76
TOPBP1-207ENST00000509162 USP6P35125 1406 aa10.29□□□□□ -0.76
TOPBP1-207ENST00000509162 CPSF1Q10570 1443 aaKnown RBP10.29□□□□□ -0.76
TOPBP1-207ENST00000509162 SLIT3O75094 1523 aa10.28□□□□□ -0.76
TOPBP1-207ENST00000509162 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
TOPBP1-207ENST00000509162 LMO7Q8WWI1 1683 aa10.28□□□□□ -0.76
TOPBP1-207ENST00000509162 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.27□□□□□ -0.76
TOPBP1-207ENST00000509162 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.77
TOPBP1-207ENST00000509162 PLEKHG3A1L390 1219 aa10.27□□□□□ -0.77
TOPBP1-207ENST00000509162 POTEAQ6S8J7 498 aa10.27□□□□□ -0.77
TOPBP1-207ENST00000509162 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.77
TOPBP1-207ENST00000509162 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-207ENST00000509162 ACEP12821 1306 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms