RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 KDM4FA0A1W2PPD8 638 aa14.61□□□□□ -0.07
COPS4-206ENST00000509093 USP32Q8NFA0 1604 aa14.6□□□□□ -0.07
COPS4-206ENST00000509093 PTCH1Q13635 1447 aa14.6□□□□□ -0.07
COPS4-206ENST00000509093 XRN1Q8IZH2 1706 aaKnown RBP14.6□□□□□ -0.07
COPS4-206ENST00000509093 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
COPS4-206ENST00000509093 GGNBP2Q9H3C7 697 aa14.6□□□□□ -0.07
COPS4-206ENST00000509093 RBM33Q96EV2 1170 aaKnown RBP14.59□□□□□ -0.07
COPS4-206ENST00000509093 FYB1O15117 783 aa14.59□□□□□ -0.07
COPS4-206ENST00000509093 NPHP4O75161 1426 aaPredicted RBP14.59□□□□□ -0.07
COPS4-206ENST00000509093 NFKBIBQ15653 356 aa14.58□□□□□ -0.08
COPS4-206ENST00000509093 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
COPS4-206ENST00000509093 ATP7BP35670 1465 aa14.58□□□□□ -0.08
COPS4-206ENST00000509093 ADGRB2O60241 1585 aa14.58□□□□□ -0.08
COPS4-206ENST00000509093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.58□□□□□ -0.08
COPS4-206ENST00000509093 PIK3R4Q99570 1358 aa14.57□□□□□ -0.08
COPS4-206ENST00000509093 ADAMTS8Q9UP79 889 aa14.57□□□□□ -0.08
COPS4-206ENST00000509093 RSPH6AQ9H0K4 717 aa14.57□□□□□ -0.08
COPS4-206ENST00000509093 CPSF1Q10570 1443 aaKnown RBP14.56□□□□□ -0.08
COPS4-206ENST00000509093 EIF5BO60841 1220 aaKnown RBP14.56□□□□□ -0.08
COPS4-206ENST00000509093 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
COPS4-206ENST00000509093 RCAN3Q9UKA8 241 aa14.56□□□□□ -0.08
COPS4-206ENST00000509093 HSPA2P54652 639 aa14.55□□□□□ -0.08
COPS4-206ENST00000509093 NSD2O96028 1365 aa14.55□□□□□ -0.08
COPS4-206ENST00000509093 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
COPS4-206ENST00000509093 CHD2O14647 1828 aaKnown RBP14.54□□□□□ -0.08
COPS4-206ENST00000509093 MTHFSP49914 203 aa14.54□□□□□ -0.08
COPS4-206ENST00000509093 FAM43AQ8N2R8 423 aa14.54□□□□□ -0.08
COPS4-206ENST00000509093 CDC42BPGQ6DT37 1551 aa14.54□□□□□ -0.08
COPS4-206ENST00000509093 BLMP54132 1417 aaPredicted RBP14.53□□□□□ -0.08
COPS4-206ENST00000509093 FBLN1P23142 703 aa14.53□□□□□ -0.08
COPS4-206ENST00000509093 WDR43Q15061 677 aaKnown RBP eCLIP14.53□□□□□ -0.08
COPS4-206ENST00000509093 NME9Q86XW9 330 aa14.53□□□□□ -0.08
COPS4-206ENST00000509093 NKTRP30414 1462 aaKnown RBP14.52□□□□□ -0.08
COPS4-206ENST00000509093 ACEP12821 1306 aa14.52□□□□□ -0.09
COPS4-206ENST00000509093 PLEKHG3A1L390 1219 aa14.51□□□□□ -0.09
COPS4-206ENST00000509093 PDE3BQ13370 1112 aa14.51□□□□□ -0.09
COPS4-206ENST00000509093 PMFBP1Q8TBY8 1022 aa14.51□□□□□ -0.09
COPS4-206ENST00000509093 POLR3AO14802 1390 aaPredicted RBP14.51□□□□□ -0.09
COPS4-206ENST00000509093 EDC4Q6P2E9 1401 aaKnown RBP14.51□□□□□ -0.09
COPS4-206ENST00000509093 TOPAZ1Q8N9V7 1692 aa14.5□□□□□ -0.09
COPS4-206ENST00000509093 CCDC146Q8IYE0 955 aa14.49□□□□□ -0.09
COPS4-206ENST00000509093 KIF20BQ96Q89 1820 aa14.49□□□□□ -0.09
COPS4-206ENST00000509093 RGPD8O14715 1765 aaPredicted RBP14.48□□□□□ -0.09
COPS4-206ENST00000509093 AKAP12Q02952 1782 aa14.48□□□□□ -0.09
COPS4-206ENST00000509093 INSRP06213 1382 aa14.48□□□□□ -0.09
COPS4-206ENST00000509093 MON2Q7Z3U7 1717 aa14.48□□□□□ -0.09
COPS4-206ENST00000509093 ANKRD26Q9UPS8 1709 aa14.48□□□□□ -0.09
COPS4-206ENST00000509093 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
COPS4-206ENST00000509093 DAXXQ9UER7 740 aaPredicted RBP14.48□□□□□ -0.09
COPS4-206ENST00000509093 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
COPS4-206ENST00000509093 ITSN1Q15811 1721 aa14.47□□□□□ -0.09
COPS4-206ENST00000509093 SHPRHQ149N8 1683 aa14.46□□□□□ -0.09
COPS4-206ENST00000509093 TTC21BQ7Z4L5 1316 aa14.46□□□□□ -0.09
COPS4-206ENST00000509093 USP6P35125 1406 aa14.45□□□□□ -0.1
COPS4-206ENST00000509093 LMTK3Q96Q04 1460 aa14.45□□□□□ -0.1
COPS4-206ENST00000509093 FMN2Q9NZ56 1722 aa14.44□□□□□ -0.1
COPS4-206ENST00000509093 NGDNQ8NEJ9 315 aaKnown RBP14.44□□□□□ -0.1
COPS4-206ENST00000509093 CFAP53Q96M91 514 aa14.44□□□□□ -0.1
COPS4-206ENST00000509093 NWD1Q149M9 1564 aa14.44□□□□□ -0.1
COPS4-206ENST00000509093 C14orf37Q86TY3 774 aa14.44□□□□□ -0.1
COPS4-206ENST00000509093 PROSER2Q86WR7 435 aaPredicted RBP14.44□□□□□ -0.1
COPS4-206ENST00000509093 POLKQ9UBT6 870 aa14.44□□□□□ -0.1
COPS4-206ENST00000509093 ADGRL3Q9HAR2 1447 aa14.44□□□□□ -0.1
COPS4-206ENST00000509093 NRKQ7Z2Y5 1582 aa14.43□□□□□ -0.1
COPS4-206ENST00000509093 SSH2Q76I76 1423 aa14.43□□□□□ -0.1
COPS4-206ENST00000509093 ANKARQ7Z5J8 1434 aa14.43□□□□□ -0.1
COPS4-206ENST00000509093 CDCA7LQ96GN5 454 aa14.43□□□□□ -0.1
COPS4-206ENST00000509093 APAF1O14727 1248 aa14.43□□□□□ -0.1
COPS4-206ENST00000509093 COG3Q96JB2 828 aa14.43□□□□□ -0.1
COPS4-206ENST00000509093 COL3A1P02461 1466 aaPredicted RBP14.42□□□□□ -0.1
COPS4-206ENST00000509093 SLC4A3P48751 1232 aa14.42□□□□□ -0.1
COPS4-206ENST00000509093 EMILIN1Q9Y6C2 1016 aa14.42□□□□□ -0.1
COPS4-206ENST00000509093 KDM2BQ8NHM5 1336 aa14.41□□□□□ -0.1
COPS4-206ENST00000509093 RRS1Q15050 365 aaKnown RBP14.41□□□□□ -0.1
COPS4-206ENST00000509093 CRBNQ96SW2 442 aa14.41□□□□□ -0.1
COPS4-206ENST00000509093 STRCP1A6NGW2 1772 aa14.4□□□□□ -0.1
COPS4-206ENST00000509093 FRAT2O75474 233 aaPredicted RBP14.4□□□□□ -0.1
COPS4-206ENST00000509093 U2AF1L5P0DN76 240 aaPredicted RBP14.4□□□□□ -0.1
COPS4-206ENST00000509093 U2AF1Q01081 240 aaKnown RBP eCLIP14.4□□□□□ -0.1
COPS4-206ENST00000509093 FAM161AQ3B820 660 aa14.4□□□□□ -0.1
COPS4-206ENST00000509093 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
COPS4-206ENST00000509093 PNPLA6Q8IY17 1366 aa14.39□□□□□ -0.11
COPS4-206ENST00000509093 U2SURPO15042 1029 aaKnown RBP14.39□□□□□ -0.11
COPS4-206ENST00000509093 SKAP1Q86WV1 359 aa14.39□□□□□ -0.11
COPS4-206ENST00000509093 PKNOX2Q96KN3 472 aa14.39□□□□□ -0.11
COPS4-206ENST00000509093 OVOS2A0A0J9YW53 1432 aa14.38□□□□□ -0.11
COPS4-206ENST00000509093 OVOS2Q6IE36 1432 aa14.38□□□□□ -0.11
COPS4-206ENST00000509093 ESCO1Q5FWF5 840 aa14.38□□□□□ -0.11
COPS4-206ENST00000509093 ORAI2Q96SN7 254 aa14.38□□□□□ -0.11
COPS4-206ENST00000509093 STRCQ7RTU9 1775 aa14.38□□□□□ -0.11
COPS4-206ENST00000509093 SOX12O15370 315 aa14.38□□□□□ -0.11
COPS4-206ENST00000509093 CENPQQ7L2Z9 268 aaPredicted RBP14.38□□□□□ -0.11
COPS4-206ENST00000509093 ZNF521Q96K83 1311 aa14.37□□□□□ -0.11
COPS4-206ENST00000509093 DIAPH1O60610 1272 aaKnown RBP14.37□□□□□ -0.11
COPS4-206ENST00000509093 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
COPS4-206ENST00000509093 NUTM2GQ5VZR2 741 aa14.37□□□□□ -0.11
COPS4-206ENST00000509093 RRP7AQ9Y3A4 280 aaKnown RBP14.37□□□□□ -0.11
COPS4-206ENST00000509093 TMEM94Q12767 1356 aa14.37□□□□□ -0.11
COPS4-206ENST00000509093 AATKQ6ZMQ8 1374 aa14.37□□□□□ -0.11
COPS4-206ENST00000509093 MAP2P11137 1827 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms