RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 USP32Q8NFA0 1604 aa13.8□□□□□ -0.2
PTPN20-216ENST00000506080 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
PTPN20-216ENST00000506080 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
PTPN20-216ENST00000506080 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
PTPN20-216ENST00000506080 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
PTPN20-216ENST00000506080 ANKRD30BQ9BXX2 1392 aa13.78□□□□□ -0.2
PTPN20-216ENST00000506080 VPS72Q15906 364 aa13.78□□□□□ -0.2
PTPN20-216ENST00000506080 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
PTPN20-216ENST00000506080 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
PTPN20-216ENST00000506080 TNS3Q68CZ2 1445 aa13.78□□□□□ -0.2
PTPN20-216ENST00000506080 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
PTPN20-216ENST00000506080 PROM2Q8N271 834 aa13.77□□□□□ -0.21
PTPN20-216ENST00000506080 YTHDC2Q9H6S0 1430 aaKnown RBP13.77□□□□□ -0.21
PTPN20-216ENST00000506080 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.21
PTPN20-216ENST00000506080 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
PTPN20-216ENST00000506080 A0A0G2JS52 829 aa13.76□□□□□ -0.21
PTPN20-216ENST00000506080 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
PTPN20-216ENST00000506080 MYT1Q01538 1121 aa13.76□□□□□ -0.21
PTPN20-216ENST00000506080 PSME1Q06323 249 aa13.76□□□□□ -0.21
PTPN20-216ENST00000506080 PIK3C2GO75747 1445 aa13.75□□□□□ -0.21
PTPN20-216ENST00000506080 PSDA5PKW4 1024 aaPredicted RBP13.75□□□□□ -0.21
PTPN20-216ENST00000506080 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
PTPN20-216ENST00000506080 PLCH1Q4KWH8 1693 aa13.75□□□□□ -0.21
PTPN20-216ENST00000506080 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
PTPN20-216ENST00000506080 RGPD8O14715 1765 aaPredicted RBP13.74□□□□□ -0.21
PTPN20-216ENST00000506080 FAM83GA6ND36 823 aa13.73□□□□□ -0.21
PTPN20-216ENST00000506080 ONECUT3O60422 494 aaPredicted RBP13.73□□□□□ -0.21
PTPN20-216ENST00000506080 SBNO1A3KN83 1393 aa13.73□□□□□ -0.21
PTPN20-216ENST00000506080 GABBR2O75899 941 aa13.73□□□□□ -0.21
PTPN20-216ENST00000506080 BAG6P46379 1132 aa13.73□□□□□ -0.21
PTPN20-216ENST00000506080 PMFBP1Q8TBY8 1022 aa13.73□□□□□ -0.21
PTPN20-216ENST00000506080 NWD2Q9ULI1 1742 aa13.72□□□□□ -0.21
PTPN20-216ENST00000506080 NRXN1Q9ULB1 1477 aa13.72□□□□□ -0.21
PTPN20-216ENST00000506080 LRP5O75197 1615 aa13.72□□□□□ -0.21
PTPN20-216ENST00000506080 FAM98CQ17RN3 349 aaKnown RBP13.72□□□□□ -0.21
PTPN20-216ENST00000506080 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
PTPN20-216ENST00000506080 MPHOSPH9Q99550 1183 aa13.72□□□□□ -0.21
PTPN20-216ENST00000506080 ARHGEF10O15013 1369 aa13.71□□□□□ -0.21
PTPN20-216ENST00000506080 ABCA3Q99758 1704 aa13.71□□□□□ -0.21
PTPN20-216ENST00000506080 CFAP70Q5T0N1 1121 aa13.71□□□□□ -0.22
PTPN20-216ENST00000506080 PRAM1Q96QH2 718 aa13.71□□□□□ -0.22
PTPN20-216ENST00000506080 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.22
PTPN20-216ENST00000506080 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.22
PTPN20-216ENST00000506080 HRCP23327 699 aa13.7□□□□□ -0.22
PTPN20-216ENST00000506080 FAM182BQ5T319 152 aa13.7□□□□□ -0.22
PTPN20-216ENST00000506080 BTG4Q9NY30 223 aa13.7□□□□□ -0.22
PTPN20-216ENST00000506080 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
PTPN20-216ENST00000506080 POGKQ9P215 609 aa13.68□□□□□ -0.22
PTPN20-216ENST00000506080 NRAPQ86VF7 1730 aa13.66□□□□□ -0.22
PTPN20-216ENST00000506080 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
PTPN20-216ENST00000506080 R3HDM1Q15032 1099 aaKnown RBP13.65□□□□□ -0.22
PTPN20-216ENST00000506080 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
PTPN20-216ENST00000506080 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
PTPN20-216ENST00000506080 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
PTPN20-216ENST00000506080 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
PTPN20-216ENST00000506080 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
PTPN20-216ENST00000506080 TRAK1Q9UPV9 953 aa13.64□□□□□ -0.23
PTPN20-216ENST00000506080 COL14A1Q05707 1796 aaKnown RBP13.63□□□□□ -0.23
PTPN20-216ENST00000506080 MINK1Q8N4C8 1332 aaPredicted RBP13.63□□□□□ -0.23
PTPN20-216ENST00000506080 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
PTPN20-216ENST00000506080 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
PTPN20-216ENST00000506080 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
PTPN20-216ENST00000506080 RGPD1P0DJD0 1748 aa13.62□□□□□ -0.23
PTPN20-216ENST00000506080 DLC1Q96QB1 1528 aa13.62□□□□□ -0.23
PTPN20-216ENST00000506080 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
PTPN20-216ENST00000506080 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-216ENST00000506080 ALS2Q96Q42 1657 aa13.61□□□□□ -0.23
PTPN20-216ENST00000506080 PRDM11Q9NQV5 511 aa13.61□□□□□ -0.23
PTPN20-216ENST00000506080 ADGRB2O60241 1585 aa13.6□□□□□ -0.23
PTPN20-216ENST00000506080 NGDNQ8NEJ9 315 aaKnown RBP13.6□□□□□ -0.23
PTPN20-216ENST00000506080 TRIM37O94972 964 aa13.59□□□□□ -0.23
PTPN20-216ENST00000506080 CHRNA2Q15822 529 aa13.59□□□□□ -0.23
PTPN20-216ENST00000506080 STRN4Q9NRL3 753 aa13.59□□□□□ -0.23
PTPN20-216ENST00000506080 THSD7AQ9UPZ6 1657 aa13.59□□□□□ -0.23
PTPN20-216ENST00000506080 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
PTPN20-216ENST00000506080 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.23
PTPN20-216ENST00000506080 TNS1Q9HBL0 1735 aaKnown RBP13.58□□□□□ -0.23
PTPN20-216ENST00000506080 WASLO00401 505 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-216ENST00000506080 ADGRB1O14514 1584 aa13.58□□□□□ -0.24
PTPN20-216ENST00000506080 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
PTPN20-216ENST00000506080 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
PTPN20-216ENST00000506080 FKBP8Q14318 412 aa13.57□□□□□ -0.24
PTPN20-216ENST00000506080 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
PTPN20-216ENST00000506080 KDM2AQ9Y2K7 1162 aa13.57□□□□□ -0.24
PTPN20-216ENST00000506080 CRYBG1Q9Y4K1 1723 aa13.57□□□□□ -0.24
PTPN20-216ENST00000506080 SPATA31A1Q5TZJ5 1347 aa13.57□□□□□ -0.24
PTPN20-216ENST00000506080 APBA3O96018 575 aa13.56□□□□□ -0.24
PTPN20-216ENST00000506080 FAM196AQ6ZSG2 479 aa13.56□□□□□ -0.24
PTPN20-216ENST00000506080 USP35Q9P2H5 1018 aa13.56□□□□□ -0.24
PTPN20-216ENST00000506080 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
PTPN20-216ENST00000506080 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
PTPN20-216ENST00000506080 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
PTPN20-216ENST00000506080 EVA1CP58658 441 aa13.53□□□□□ -0.24
PTPN20-216ENST00000506080 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
PTPN20-216ENST00000506080 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
PTPN20-216ENST00000506080 PDE3BQ13370 1112 aa13.52□□□□□ -0.25
PTPN20-216ENST00000506080 PHRF1Q9P1Y6 1649 aaKnown RBP13.51□□□□□ -0.25
PTPN20-216ENST00000506080 ATP7BP35670 1465 aa13.51□□□□□ -0.25
PTPN20-216ENST00000506080 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
PTPN20-216ENST00000506080 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms