RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 AKAP12Q02952 1782 aa32.85■■■□□ 2.85
DHFR-203ENST00000505337 PDE3BQ13370 1112 aa32.84■■■□□ 2.85
DHFR-203ENST00000505337 ITSN1Q15811 1721 aa32.84■■■□□ 2.85
DHFR-203ENST00000505337 NALCNQ8IZF0 1738 aa32.83■■■□□ 2.85
DHFR-203ENST00000505337 TERF2IPQ9NYB0 399 aa32.82■■■□□ 2.85
DHFR-203ENST00000505337 TOPAZ1Q8N9V7 1692 aa32.82■■■□□ 2.85
DHFR-203ENST00000505337 CDC42BPGQ6DT37 1551 aa32.8■■■□□ 2.84
DHFR-203ENST00000505337 RNF123Q5XPI4 1314 aa32.79■■■□□ 2.84
DHFR-203ENST00000505337 MST1RQ04912 1400 aa32.76■■■□□ 2.84
DHFR-203ENST00000505337 WASLO00401 505 aaPredicted RBP32.76■■■□□ 2.83
DHFR-203ENST00000505337 ERICH6BQ5W0A0 696 aa32.76■■■□□ 2.83
DHFR-203ENST00000505337 HDGFL2Q7Z4V5 671 aaPredicted RBP32.74■■■□□ 2.83
DHFR-203ENST00000505337 CPSF1Q10570 1443 aaKnown RBP32.73■■■□□ 2.83
DHFR-203ENST00000505337 PPIP5K1Q6PFW1 1433 aa32.72■■■□□ 2.83
DHFR-203ENST00000505337 CABP1Q9NZU7 370 aa32.72■■■□□ 2.83
DHFR-203ENST00000505337 SALL2Q9Y467 1007 aaPredicted RBP32.72■■■□□ 2.83
DHFR-203ENST00000505337 IRX6P78412 446 aaPredicted RBP32.71■■■□□ 2.83
DHFR-203ENST00000505337 BRINP3Q76B58 766 aa32.7■■■□□ 2.83
DHFR-203ENST00000505337 TNNT2P45379 298 aaPredicted RBP32.69■■■□□ 2.82
DHFR-203ENST00000505337 ZNF521Q96K83 1311 aa32.69■■■□□ 2.82
DHFR-203ENST00000505337 NRKQ7Z2Y5 1582 aa32.68■■■□□ 2.82
DHFR-203ENST00000505337 COL3A1P02461 1466 aaPredicted RBP32.67■■■□□ 2.82
DHFR-203ENST00000505337 FYB1O15117 783 aa32.66■■■□□ 2.82
DHFR-203ENST00000505337 EDC4Q6P2E9 1401 aaKnown RBP32.66■■■□□ 2.82
DHFR-203ENST00000505337 MTHFSP49914 203 aa32.65■■■□□ 2.82
DHFR-203ENST00000505337 PHLPP1O60346 1717 aa32.64■■■□□ 2.82
DHFR-203ENST00000505337 C1orf167Q5SNV9 1468 aa32.64■■■□□ 2.82
DHFR-203ENST00000505337 CDCA7LQ96GN5 454 aa32.64■■■□□ 2.82
DHFR-203ENST00000505337 GGNBP2Q9H3C7 697 aa32.64■■■□□ 2.82
DHFR-203ENST00000505337 MAP2P11137 1827 aaKnown RBP32.62■■■□□ 2.81
DHFR-203ENST00000505337 AHDC1Q5TGY3 1603 aaPredicted RBP32.62■■■□□ 2.81
DHFR-203ENST00000505337 CCDC146Q8IYE0 955 aa32.61■■■□□ 2.81
DHFR-203ENST00000505337 PELP1Q8IZL8 1130 aaKnown RBP32.61■■■□□ 2.81
DHFR-203ENST00000505337 CFAP53Q96M91 514 aa32.61■■■□□ 2.81
DHFR-203ENST00000505337 NUDT16Q96DE0 195 aaKnown RBP32.6■■■□□ 2.81
DHFR-203ENST00000505337 COL16A1Q07092 1604 aaPredicted RBP32.6■■■□□ 2.81
DHFR-203ENST00000505337 PRR36Q9H6K5 1346 aa32.59■■■□□ 2.81
DHFR-203ENST00000505337 CCDC61Q9Y6R9 512 aa32.57■■■□□ 2.81
DHFR-203ENST00000505337 MED1Q15648 1581 aaPredicted RBP32.56■■■□□ 2.8
DHFR-203ENST00000505337 RGPD8O14715 1765 aaPredicted RBP32.56■■■□□ 2.8
DHFR-203ENST00000505337 NGEFQ8N5V2 710 aa32.56■■■□□ 2.8
DHFR-203ENST00000505337 ORAI2Q96SN7 254 aa32.56■■■□□ 2.8
DHFR-203ENST00000505337 APAF1O14727 1248 aa32.54■■■□□ 2.8
DHFR-203ENST00000505337 RCAN3Q9UKA8 241 aa32.54■■■□□ 2.8
DHFR-203ENST00000505337 NHSL1Q5SYE7 1610 aa32.53■■■□□ 2.8
DHFR-203ENST00000505337 DDX17Q92841 729 aaKnown RBP32.53■■■□□ 2.8
DHFR-203ENST00000505337 PPP4R2Q9NY27 417 aa32.52■■■□□ 2.8
DHFR-203ENST00000505337 FMN2Q9NZ56 1722 aa32.51■■■□□ 2.79
DHFR-203ENST00000505337 PNPLA6Q8IY17 1366 aa32.5■■■□□ 2.79
DHFR-203ENST00000505337 JCADQ9P266 1359 aa32.49■■■□□ 2.79
DHFR-203ENST00000505337 NUTM2FA1L443 756 aa32.49■■■□□ 2.79
DHFR-203ENST00000505337 GOLGA2Q08379 1002 aa32.48■■■□□ 2.79
DHFR-203ENST00000505337 RRP1P56182 461 aaKnown RBP32.48■■■□□ 2.79
DHFR-203ENST00000505337 DUSP27Q5VZP5 1158 aa32.47■■■□□ 2.79
DHFR-203ENST00000505337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.47■■■□□ 2.79
DHFR-203ENST00000505337 RUNDC1Q96C34 613 aa32.46■■■□□ 2.79
DHFR-203ENST00000505337 ESCO1Q5FWF5 840 aa32.46■■■□□ 2.79
DHFR-203ENST00000505337 SLFN5Q08AF3 891 aa32.43■■■□□ 2.78
DHFR-203ENST00000505337 TRMT2AQ8IZ69 625 aaKnown RBP32.43■■■□□ 2.78
DHFR-203ENST00000505337 ZNF692Q9BU19 519 aaPredicted RBP32.42■■■□□ 2.78
DHFR-203ENST00000505337 CDK12Q9NYV4 1490 aaPredicted RBP32.41■■■□□ 2.78
DHFR-203ENST00000505337 PLEKHG3A1L390 1219 aa32.41■■■□□ 2.78
DHFR-203ENST00000505337 USP6P35125 1406 aa32.41■■■□□ 2.78
DHFR-203ENST00000505337 AATKQ6ZMQ8 1374 aa32.4■■■□□ 2.78
DHFR-203ENST00000505337 NME9Q86XW9 330 aa32.4■■■□□ 2.78
DHFR-203ENST00000505337 SOS2Q07890 1332 aaPredicted RBP32.39■■■□□ 2.78
DHFR-203ENST00000505337 LRRC59Q96AG4 307 aaKnown RBP32.38■■■□□ 2.77
DHFR-203ENST00000505337 PHF23Q9BUL5 403 aaPredicted RBP32.38■■■□□ 2.77
DHFR-203ENST00000505337 NCBP3Q53F19 620 aaKnown RBP32.37■■■□□ 2.77
DHFR-203ENST00000505337 ANKARQ7Z5J8 1434 aa32.37■■■□□ 2.77
DHFR-203ENST00000505337 U2AF1L5P0DN76 240 aaPredicted RBP32.36■■■□□ 2.77
DHFR-203ENST00000505337 U2AF1Q01081 240 aaKnown RBP eCLIP32.36■■■□□ 2.77
DHFR-203ENST00000505337 TCP11L2Q8N4U5 519 aa32.36■■■□□ 2.77
DHFR-203ENST00000505337 SSH2Q76I76 1423 aa32.36■■■□□ 2.77
DHFR-203ENST00000505337 OVOS2A0A0J9YW53 1432 aa32.35■■■□□ 2.77
DHFR-203ENST00000505337 OVOS2Q6IE36 1432 aa32.35■■■□□ 2.77
DHFR-203ENST00000505337 ACEP12821 1306 aa32.35■■■□□ 2.77
DHFR-203ENST00000505337 FOXO3O43524 673 aa32.34■■■□□ 2.77
DHFR-203ENST00000505337 WWC1Q8IX03 1113 aa32.34■■■□□ 2.77
DHFR-203ENST00000505337 POLKQ9UBT6 870 aa32.34■■■□□ 2.77
DHFR-203ENST00000505337 SPATA31A6Q5VVP1 1343 aa32.34■■■□□ 2.77
DHFR-203ENST00000505337 E9PSI1 815 aa32.34■■■□□ 2.77
DHFR-203ENST00000505337 SPINK5Q9NQ38 1064 aaPredicted RBP32.34■■■□□ 2.77
DHFR-203ENST00000505337 NPHP3Q7Z494 1330 aa32.33■■■□□ 2.77
DHFR-203ENST00000505337 ILDR2Q71H61 639 aa32.33■■■□□ 2.77
DHFR-203ENST00000505337 USP54Q70EL1 1684 aa32.32■■■□□ 2.76
DHFR-203ENST00000505337 CCDC27Q2M243 656 aa32.32■■■□□ 2.76
DHFR-203ENST00000505337 PXDNQ92626 1479 aa32.32■■■□□ 2.76
DHFR-203ENST00000505337 LRP6O75581 1613 aa32.31■■■□□ 2.76
DHFR-203ENST00000505337 DIAPH1O60610 1272 aaKnown RBP32.31■■■□□ 2.76
DHFR-203ENST00000505337 ZRANB1Q9UGI0 708 aa32.31■■■□□ 2.76
DHFR-203ENST00000505337 COG3Q96JB2 828 aa32.3■■■□□ 2.76
DHFR-203ENST00000505337 TTC21BQ7Z4L5 1316 aa32.3■■■□□ 2.76
DHFR-203ENST00000505337 PIK3C2AO00443 1686 aa32.29■■■□□ 2.76
DHFR-203ENST00000505337 PLEKHF1Q96S99 279 aa32.29■■■□□ 2.76
DHFR-203ENST00000505337 KIF1AQ12756 1690 aa32.29■■■□□ 2.76
DHFR-203ENST00000505337 XPCQ01831 940 aaPredicted RBP32.29■■■□□ 2.76
DHFR-203ENST00000505337 PHF8Q9UPP1 1060 aa32.29■■■□□ 2.76
DHFR-203ENST00000505337 MARF1Q9Y4F3 1742 aaKnown RBP32.28■■■□□ 2.76
DHFR-203ENST00000505337 B4GALNT3Q6L9W6 998 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms