RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 NSD2O96028 1365 aa23.6■■□□□ 1.37
SCARB2-203ENST00000502908 NPM1P06748 294 aaKnown RBP eCLIP23.6■■□□□ 1.37
SCARB2-203ENST00000502908 ATF7IPQ6VMQ6 1270 aa23.6■■□□□ 1.37
SCARB2-203ENST00000502908 C22orf23Q9BZE7 217 aa23.6■■□□□ 1.37
SCARB2-203ENST00000502908 FYB1O15117 783 aa23.6■■□□□ 1.37
SCARB2-203ENST00000502908 NEXMIFQ5QGS0 1516 aa23.6■■□□□ 1.37
SCARB2-203ENST00000502908 GZF1Q9H116 711 aaPredicted RBP23.59■■□□□ 1.37
SCARB2-203ENST00000502908 ABCC11Q96J66 1382 aa23.59■■□□□ 1.37
SCARB2-203ENST00000502908 PRAM1Q96QH2 718 aa23.58■■□□□ 1.37
SCARB2-203ENST00000502908 DDX19BQ9UMR2 479 aa23.57■■□□□ 1.36
SCARB2-203ENST00000502908 MLH3Q9UHC1 1453 aa23.55■■□□□ 1.36
SCARB2-203ENST00000502908 COL3A1P02461 1466 aaPredicted RBP23.54■■□□□ 1.36
SCARB2-203ENST00000502908 LNPKQ9C0E8 428 aa23.54■■□□□ 1.36
SCARB2-203ENST00000502908 HDAC1Q13547 482 aaPredicted RBP23.54■■□□□ 1.36
SCARB2-203ENST00000502908 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
SCARB2-203ENST00000502908 DIAPH1O60610 1272 aaKnown RBP23.52■■□□□ 1.36
SCARB2-203ENST00000502908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.52■■□□□ 1.36
SCARB2-203ENST00000502908 CT47B1P0C2W7 299 aaPredicted RBP23.52■■□□□ 1.36
SCARB2-203ENST00000502908 PUS7Q96PZ0 661 aaKnown RBP23.52■■□□□ 1.36
SCARB2-203ENST00000502908 THUMPD2Q9BTF0 503 aaKnown RBP23.52■■□□□ 1.36
SCARB2-203ENST00000502908 MYO5BQ9ULV0 1848 aa23.52■■□□□ 1.36
SCARB2-203ENST00000502908 ZBTB40Q9NUA8 1239 aa23.51■■□□□ 1.35
SCARB2-203ENST00000502908 C1orf115Q9H7X2 142 aa23.5■■□□□ 1.35
SCARB2-203ENST00000502908 TERF2IPQ9NYB0 399 aa23.5■■□□□ 1.35
SCARB2-203ENST00000502908 PIK3C2BO00750 1634 aa23.5■■□□□ 1.35
SCARB2-203ENST00000502908 SMC5Q8IY18 1101 aa23.5■■□□□ 1.35
SCARB2-203ENST00000502908 CABP1Q9NZU7 370 aa23.5■■□□□ 1.35
SCARB2-203ENST00000502908 CD163L1Q9NR16 1453 aa23.49■■□□□ 1.35
SCARB2-203ENST00000502908 HMOX1P09601 288 aa23.48■■□□□ 1.35
SCARB2-203ENST00000502908 MCM4P33991 863 aa23.48■■□□□ 1.35
SCARB2-203ENST00000502908 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
SCARB2-203ENST00000502908 ELL2O00472 640 aaPredicted RBP23.48■■□□□ 1.35
SCARB2-203ENST00000502908 EIF5BO60841 1220 aaKnown RBP23.48■■□□□ 1.35
SCARB2-203ENST00000502908 PRKAR2BP31323 418 aa23.47■■□□□ 1.35
SCARB2-203ENST00000502908 CDK19Q9BWU1 502 aa23.47■■□□□ 1.35
SCARB2-203ENST00000502908 PTPRMP28827 1452 aa23.46■■□□□ 1.35
SCARB2-203ENST00000502908 FBXO31Q5XUX0 539 aaPredicted RBP23.46■■□□□ 1.35
SCARB2-203ENST00000502908 KIF16BQ96L93 1317 aa23.45■■□□□ 1.34
SCARB2-203ENST00000502908 FAM43AQ8N2R8 423 aa23.45■■□□□ 1.34
SCARB2-203ENST00000502908 PHACTR3Q96KR7 559 aa23.45■■□□□ 1.34
SCARB2-203ENST00000502908 HSCBQ8IWL3 235 aa23.44■■□□□ 1.34
SCARB2-203ENST00000502908 PANK2Q9BZ23 570 aa23.44■■□□□ 1.34
SCARB2-203ENST00000502908 HDGFL2Q7Z4V5 671 aaPredicted RBP23.44■■□□□ 1.34
SCARB2-203ENST00000502908 CHMP5Q9NZZ3 219 aa23.44■■□□□ 1.34
SCARB2-203ENST00000502908 ATAD2Q6PL18 1390 aa23.43■■□□□ 1.34
SCARB2-203ENST00000502908 IL16Q14005 1332 aa23.43■■□□□ 1.34
SCARB2-203ENST00000502908 IPO8O15397 1037 aaKnown RBP23.43■■□□□ 1.34
SCARB2-203ENST00000502908 NUCB1Q02818 461 aa23.43■■□□□ 1.34
SCARB2-203ENST00000502908 TSPYL6Q8N831 410 aa23.43■■□□□ 1.34
SCARB2-203ENST00000502908 RRAGDQ9NQL2 400 aaPredicted RBP23.43■■□□□ 1.34
SCARB2-203ENST00000502908 CFAP74Q9C0B2 1584 aa23.42■■□□□ 1.34
SCARB2-203ENST00000502908 XRCC6P12956 609 aaKnown RBP eCLIP23.42■■□□□ 1.34
SCARB2-203ENST00000502908 LRRC7Q96NW7 1537 aa23.42■■□□□ 1.34
SCARB2-203ENST00000502908 YTHDC2Q9H6S0 1430 aaKnown RBP23.42■■□□□ 1.34
SCARB2-203ENST00000502908 CHD1LQ86WJ1 897 aa23.42■■□□□ 1.34
SCARB2-203ENST00000502908 L1TD1Q5T7N2 865 aaKnown RBP23.41■■□□□ 1.34
SCARB2-203ENST00000502908 ANKRD45Q5TZF3 282 aa23.41■■□□□ 1.34
SCARB2-203ENST00000502908 FOXD4L1Q9NU39 408 aa23.41■■□□□ 1.34
SCARB2-203ENST00000502908 WAPLQ7Z5K2 1190 aa23.41■■□□□ 1.34
SCARB2-203ENST00000502908 YEATS2Q9ULM3 1422 aa23.41■■□□□ 1.34
SCARB2-203ENST00000502908 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
SCARB2-203ENST00000502908 TRAK2O60296 914 aa23.4■■□□□ 1.34
SCARB2-203ENST00000502908 RSPH6AQ9H0K4 717 aa23.4■■□□□ 1.34
SCARB2-203ENST00000502908 GOLGA6L3A6NEY3 463 aa23.4■■□□□ 1.34
SCARB2-203ENST00000502908 POLKQ9UBT6 870 aa23.39■■□□□ 1.34
SCARB2-203ENST00000502908 ANKRD26Q9UPS8 1709 aa23.39■■□□□ 1.33
SCARB2-203ENST00000502908 SLC52A1Q9NWF4 448 aa23.39■■□□□ 1.33
SCARB2-203ENST00000502908 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
SCARB2-203ENST00000502908 EMILIN1Q9Y6C2 1016 aa23.38■■□□□ 1.33
SCARB2-203ENST00000502908 FCHSD2O94868 740 aa23.37■■□□□ 1.33
SCARB2-203ENST00000502908 PNPLA6Q8IY17 1366 aa23.37■■□□□ 1.33
SCARB2-203ENST00000502908 ALDH1L2Q3SY69 923 aa23.37■■□□□ 1.33
SCARB2-203ENST00000502908 ZRANB1Q9UGI0 708 aa23.37■■□□□ 1.33
SCARB2-203ENST00000502908 STAG3Q9UJ98 1225 aa23.37■■□□□ 1.33
SCARB2-203ENST00000502908 PPIP5K1Q6PFW1 1433 aa23.36■■□□□ 1.33
SCARB2-203ENST00000502908 ZBTB7BO15156 539 aaPredicted RBP23.35■■□□□ 1.33
SCARB2-203ENST00000502908 CD2BP2O95400 341 aaKnown RBP23.35■■□□□ 1.33
SCARB2-203ENST00000502908 VAMP4O75379 141 aa23.35■■□□□ 1.33
SCARB2-203ENST00000502908 PNNQ9H307 717 aaKnown RBP23.34■■□□□ 1.33
SCARB2-203ENST00000502908 TMEM131LA2VDJ0 1609 aa23.34■■□□□ 1.33
SCARB2-203ENST00000502908 PRKCSHP14314 528 aaPredicted RBP23.34■■□□□ 1.33
SCARB2-203ENST00000502908 RBM42Q9BTD8 480 aaKnown RBP23.34■■□□□ 1.33
SCARB2-203ENST00000502908 ZFYVE9O95405 1425 aa23.33■■□□□ 1.33
SCARB2-203ENST00000502908 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.33
SCARB2-203ENST00000502908 RBM25P49756 843 aaKnown RBP23.33■■□□□ 1.33
SCARB2-203ENST00000502908 MED14O60244 1454 aa23.33■■□□□ 1.32
SCARB2-203ENST00000502908 FSD2A1L4K1 749 aa23.33■■□□□ 1.32
SCARB2-203ENST00000502908 MRPL50Q8N5N7 158 aaKnown RBP23.33■■□□□ 1.32
SCARB2-203ENST00000502908 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.32
SCARB2-203ENST00000502908 FAM83GA6ND36 823 aa23.32■■□□□ 1.32
SCARB2-203ENST00000502908 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
SCARB2-203ENST00000502908 SIRT2Q8IXJ6 389 aa23.32■■□□□ 1.32
SCARB2-203ENST00000502908 ARHGAP31Q2M1Z3 1444 aa23.32■■□□□ 1.32
SCARB2-203ENST00000502908 NFE2L2Q16236 605 aa23.32■■□□□ 1.32
SCARB2-203ENST00000502908 MBIPQ9NS73 344 aa23.32■■□□□ 1.32
SCARB2-203ENST00000502908 PREX1Q8TCU6 1659 aa23.31■■□□□ 1.32
SCARB2-203ENST00000502908 ARHGEF40Q8TER5 1519 aa23.31■■□□□ 1.32
SCARB2-203ENST00000502908 DCTN1Q14203 1278 aa23.31■■□□□ 1.32
SCARB2-203ENST00000502908 NME9Q86XW9 330 aa23.31■■□□□ 1.32
SCARB2-203ENST00000502908 KIF2CQ99661 725 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms