RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CDC42BPBQ9Y5S2 1711 aa16.07■□□□□ 0.16
VEGFA-215ENST00000497139 PDE4CQ08493 712 aa16.07■□□□□ 0.16
VEGFA-215ENST00000497139 RSPH4AQ5TD94 716 aa16.07■□□□□ 0.16
VEGFA-215ENST00000497139 SAMD9LQ8IVG5 1584 aa16.07■□□□□ 0.16
VEGFA-215ENST00000497139 FTSJ3Q8IY81 847 aaKnown RBP16.07■□□□□ 0.16
VEGFA-215ENST00000497139 RBSNQ9H1K0 784 aa16.07■□□□□ 0.16
VEGFA-215ENST00000497139 YEATS2Q9ULM3 1422 aa16.06■□□□□ 0.16
VEGFA-215ENST00000497139 KIAA1210Q9ULL0 1709 aa16.05■□□□□ 0.16
VEGFA-215ENST00000497139 NUCB1Q02818 461 aa16.05■□□□□ 0.16
VEGFA-215ENST00000497139 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
VEGFA-215ENST00000497139 SPHKAPQ2M3C7 1700 aa16.05■□□□□ 0.16
VEGFA-215ENST00000497139 ADGRL1O94910 1474 aa16.04■□□□□ 0.16
VEGFA-215ENST00000497139 PRDM10Q9NQV6 1147 aa16.04■□□□□ 0.16
VEGFA-215ENST00000497139 TNNQ9UQP3 1299 aa16.04■□□□□ 0.16
VEGFA-215ENST00000497139 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
VEGFA-215ENST00000497139 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
VEGFA-215ENST00000497139 LMBRD1Q9NUN5 540 aa16.04■□□□□ 0.16
VEGFA-215ENST00000497139 CYP2E1P05181 493 aaPredicted RBP16.03■□□□□ 0.16
VEGFA-215ENST00000497139 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
VEGFA-215ENST00000497139 LRSAM1Q6UWE0 723 aa16.03■□□□□ 0.16
VEGFA-215ENST00000497139 HNRNPMP52272 730 aaKnown RBP eCLIP16.02■□□□□ 0.161e-12■■■■■ 34.3
VEGFA-215ENST00000497139 GAS2L2Q8NHY3 880 aa16.02■□□□□ 0.16
VEGFA-215ENST00000497139 CWC22Q9HCG8 908 aaKnown RBP16.02■□□□□ 0.16
VEGFA-215ENST00000497139 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
VEGFA-215ENST00000497139 MCTP1Q6DN14 999 aa16■□□□□ 0.15
VEGFA-215ENST00000497139 CLTCL1P53675 1640 aa16■□□□□ 0.15
VEGFA-215ENST00000497139 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
VEGFA-215ENST00000497139 CD2BP2O95400 341 aaKnown RBP15.99■□□□□ 0.15
VEGFA-215ENST00000497139 RABEP1Q15276 862 aa15.99■□□□□ 0.15
VEGFA-215ENST00000497139 BBXQ8WY36 941 aaPredicted RBP15.99■□□□□ 0.15
VEGFA-215ENST00000497139 ADGRB2O60241 1585 aa15.99■□□□□ 0.15
VEGFA-215ENST00000497139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.98■□□□□ 0.155e-6■□□□□ 9.5
VEGFA-215ENST00000497139 CHD1LQ86WJ1 897 aa15.98■□□□□ 0.15
VEGFA-215ENST00000497139 MBD3O95983 291 aa15.97■□□□□ 0.15
VEGFA-215ENST00000497139 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
VEGFA-215ENST00000497139 BCL2L13Q9BXK5 485 aa15.97■□□□□ 0.15
VEGFA-215ENST00000497139 SYCP2Q9BX26 1530 aa15.97■□□□□ 0.15
VEGFA-215ENST00000497139 ZBTB40Q9NUA8 1239 aa15.97■□□□□ 0.15
VEGFA-215ENST00000497139 ZNF710Q8N1W2 664 aa15.96■□□□□ 0.15
VEGFA-215ENST00000497139 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
VEGFA-215ENST00000497139 USP32Q8NFA0 1604 aa15.96■□□□□ 0.15
VEGFA-215ENST00000497139 ATF7IPQ6VMQ6 1270 aa15.96■□□□□ 0.15
VEGFA-215ENST00000497139 PIBF1Q8WXW3 757 aa15.96■□□□□ 0.15
VEGFA-215ENST00000497139 TRIM27P14373 513 aa15.96■□□□□ 0.14
VEGFA-215ENST00000497139 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
VEGFA-215ENST00000497139 KIF3AQ9Y496 699 aa15.95■□□□□ 0.14
VEGFA-215ENST00000497139 ABCC11Q96J66 1382 aa15.95■□□□□ 0.14
VEGFA-215ENST00000497139 UHRF1BP1LA0JNW5 1464 aa15.95■□□□□ 0.14
VEGFA-215ENST00000497139 ERVK-7P63135 1459 aa15.95■□□□□ 0.14
VEGFA-215ENST00000497139 ITPRIPQ8IWB1 547 aa15.95■□□□□ 0.14
VEGFA-215ENST00000497139 GCC1Q96CN9 775 aa15.95■□□□□ 0.14
VEGFA-215ENST00000497139 ARID3AQ99856 593 aa15.95■□□□□ 0.14
VEGFA-215ENST00000497139 CHMP4BQ9H444 224 aaKnown RBP15.95■□□□□ 0.14
VEGFA-215ENST00000497139 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
VEGFA-215ENST00000497139 NEURL4Q96JN8 1562 aa15.94■□□□□ 0.14
VEGFA-215ENST00000497139 PTMAP06454 111 aaKnown RBP15.94■□□□□ 0.14
VEGFA-215ENST00000497139 TBC1D9Q6ZT07 1266 aa15.94■□□□□ 0.14
VEGFA-215ENST00000497139 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
VEGFA-215ENST00000497139 ZNF518AQ6AHZ1 1483 aa15.94■□□□□ 0.14
VEGFA-215ENST00000497139 NOS1P29475 1434 aa15.93■□□□□ 0.14
VEGFA-215ENST00000497139 SMC4Q9NTJ3 1288 aa15.93■□□□□ 0.14
VEGFA-215ENST00000497139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.93■□□□□ 0.147e-22■■■□□ 16.8
VEGFA-215ENST00000497139 UVSSAQ2YD98 709 aa15.93■□□□□ 0.14
VEGFA-215ENST00000497139 DNTTIP2Q5QJE6 756 aaKnown RBP15.93■□□□□ 0.14
VEGFA-215ENST00000497139 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
VEGFA-215ENST00000497139 SBNO2Q9Y2G9 1366 aa15.92■□□□□ 0.14
VEGFA-215ENST00000497139 IPO8O15397 1037 aaKnown RBP15.92■□□□□ 0.14
VEGFA-215ENST00000497139 CDC45O75419 566 aa15.92■□□□□ 0.14
VEGFA-215ENST00000497139 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
VEGFA-215ENST00000497139 SPTLC3Q9NUV7 552 aa15.92■□□□□ 0.14
VEGFA-215ENST00000497139 CBX1P83916 185 aa15.92■□□□□ 0.14
VEGFA-215ENST00000497139 FEZ1Q99689 392 aa15.92■□□□□ 0.14
VEGFA-215ENST00000497139 TRPM2O94759 1503 aa15.92■□□□□ 0.14
VEGFA-215ENST00000497139 MED14O60244 1454 aa15.92■□□□□ 0.14
VEGFA-215ENST00000497139 SYAP1Q96A49 352 aaPredicted RBP15.91■□□□□ 0.14
VEGFA-215ENST00000497139 CARD14Q9BXL6 1004 aa15.91■□□□□ 0.14
VEGFA-215ENST00000497139 LNPKQ9C0E8 428 aa15.91■□□□□ 0.14
VEGFA-215ENST00000497139 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
VEGFA-215ENST00000497139 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
VEGFA-215ENST00000497139 AK9Q5TCS8 1911 aa15.9■□□□□ 0.14
VEGFA-215ENST00000497139 PRPF40AO75400 957 aaKnown RBP15.9■□□□□ 0.14
VEGFA-215ENST00000497139 CFAP53Q96M91 514 aa15.9■□□□□ 0.14
VEGFA-215ENST00000497139 TSPY26PQ9H489 355 aa15.9■□□□□ 0.14
VEGFA-215ENST00000497139 TMEM63CQ9P1W3 806 aa15.9■□□□□ 0.14
VEGFA-215ENST00000497139 RRP7AQ9Y3A4 280 aaKnown RBP15.9■□□□□ 0.14
VEGFA-215ENST00000497139 PHF14O94880 888 aa15.9■□□□□ 0.14
VEGFA-215ENST00000497139 FKBP5Q13451 457 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-215ENST00000497139 NOLC1Q14978 699 aaKnown RBP eCLIP15.9■□□□□ 0.145e-26■□□□□ 10.1
VEGFA-215ENST00000497139 PPRC1Q5VV67 1664 aaKnown RBP15.9■□□□□ 0.14
VEGFA-215ENST00000497139 IL16Q14005 1332 aa15.9■□□□□ 0.14
VEGFA-215ENST00000497139 ATP2B3Q16720 1220 aa15.89■□□□□ 0.13
VEGFA-215ENST00000497139 SYCE3A1L190 88 aa15.89■□□□□ 0.13
VEGFA-215ENST00000497139 PDCL2Q8N4E4 241 aa15.89■□□□□ 0.13
VEGFA-215ENST00000497139 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
VEGFA-215ENST00000497139 DIAPH3Q9NSV4 1193 aa15.89■□□□□ 0.13
VEGFA-215ENST00000497139 IPO4Q8TEX9 1081 aaKnown RBP15.88■□□□□ 0.13
VEGFA-215ENST00000497139 TMEM51Q9NW97 253 aa15.88■□□□□ 0.13
VEGFA-215ENST00000497139 ZCCHC11Q5TAX3 1644 aaKnown RBP15.88■□□□□ 0.13
VEGFA-215ENST00000497139 TMEM57Q8N5G2 664 aa15.88■□□□□ 0.13
VEGFA-215ENST00000497139 ANKRD7Q92527 254 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms