RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
MINDY4-203ENST00000494187 ACEP12821 1306 aa11.72□□□□□ -0.53
MINDY4-203ENST00000494187 LTKP29376 864 aa11.72□□□□□ -0.53
MINDY4-203ENST00000494187 OS9Q13438 667 aaPredicted RBP11.72□□□□□ -0.53
MINDY4-203ENST00000494187 KDM5DQ9BY66 1539 aa11.72□□□□□ -0.53
MINDY4-203ENST00000494187 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
MINDY4-203ENST00000494187 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.53
MINDY4-203ENST00000494187 F6X3S4 739 aa11.71□□□□□ -0.54
MINDY4-203ENST00000494187 ASXL1Q8IXJ9 1541 aa11.7□□□□□ -0.54
MINDY4-203ENST00000494187 POGZQ7Z3K3 1410 aa11.7□□□□□ -0.54
MINDY4-203ENST00000494187 TRIM27P14373 513 aa11.7□□□□□ -0.54
MINDY4-203ENST00000494187 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
MINDY4-203ENST00000494187 ADCY10Q96PN6 1610 aa11.7□□□□□ -0.54
MINDY4-203ENST00000494187 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
MINDY4-203ENST00000494187 FOXD4L6Q3SYB3 417 aaPredicted RBP11.69□□□□□ -0.54
MINDY4-203ENST00000494187 FOXD4L3Q6VB84 417 aaPredicted RBP11.69□□□□□ -0.54
MINDY4-203ENST00000494187 ANXA1P04083 346 aa11.69□□□□□ -0.54
MINDY4-203ENST00000494187 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
MINDY4-203ENST00000494187 BECN1Q14457 450 aa11.69□□□□□ -0.54
MINDY4-203ENST00000494187 STK31Q9BXU1 1019 aa11.69□□□□□ -0.54
MINDY4-203ENST00000494187 ZMYM3Q14202 1370 aa11.69□□□□□ -0.54
MINDY4-203ENST00000494187 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
MINDY4-203ENST00000494187 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
MINDY4-203ENST00000494187 ATF7IPQ6VMQ6 1270 aa11.68□□□□□ -0.54
MINDY4-203ENST00000494187 THEMISQ8N1K5 641 aaPredicted RBP11.68□□□□□ -0.54
MINDY4-203ENST00000494187 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
MINDY4-203ENST00000494187 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
MINDY4-203ENST00000494187 MS4A1P11836 297 aa11.67□□□□□ -0.54
MINDY4-203ENST00000494187 KCNA6P17658 529 aa11.67□□□□□ -0.54
MINDY4-203ENST00000494187 ZFYVE16Q7Z3T8 1539 aa11.67□□□□□ -0.54
MINDY4-203ENST00000494187 SEC24BO95487 1268 aa11.67□□□□□ -0.54
MINDY4-203ENST00000494187 DDX17Q92841 729 aaKnown RBP11.67□□□□□ -0.54
MINDY4-203ENST00000494187 NLRP2Q9NX02 1062 aa11.67□□□□□ -0.54
MINDY4-203ENST00000494187 PTPRTO14522 1441 aa11.67□□□□□ -0.54
MINDY4-203ENST00000494187 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
MINDY4-203ENST00000494187 HSP90AB1P08238 724 aaKnown RBP11.67□□□□□ -0.54
MINDY4-203ENST00000494187 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
MINDY4-203ENST00000494187 HSPA2P54652 639 aa11.66□□□□□ -0.54
MINDY4-203ENST00000494187 GNAI1P63096 354 aa11.66□□□□□ -0.54
MINDY4-203ENST00000494187 MVPQ14764 893 aaKnown RBP11.66□□□□□ -0.54
MINDY4-203ENST00000494187 C8orf58Q8NAV2 365 aa11.66□□□□□ -0.54
MINDY4-203ENST00000494187 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
MINDY4-203ENST00000494187 ERVK-7P63135 1459 aa11.66□□□□□ -0.54
MINDY4-203ENST00000494187 WDR63Q8IWG1 891 aa11.66□□□□□ -0.54
MINDY4-203ENST00000494187 SMARCA5O60264 1052 aaPredicted RBP11.66□□□□□ -0.54
MINDY4-203ENST00000494187 TEFQ10587 303 aa11.66□□□□□ -0.54
MINDY4-203ENST00000494187 NFE2L2Q16236 605 aa11.65□□□□□ -0.54
MINDY4-203ENST00000494187 FCHSD2O94868 740 aa11.65□□□□□ -0.54
MINDY4-203ENST00000494187 PDE3AQ14432 1141 aa11.65□□□□□ -0.54
MINDY4-203ENST00000494187 RILPL2Q969X0 211 aa11.65□□□□□ -0.54
MINDY4-203ENST00000494187 METP08581 1390 aa11.65□□□□□ -0.54
MINDY4-203ENST00000494187 ANKRD36BQ8N2N9 1353 aa11.65□□□□□ -0.54
MINDY4-203ENST00000494187 YTHDC2Q9H6S0 1430 aaKnown RBP11.65□□□□□ -0.54
MINDY4-203ENST00000494187 NKTRP30414 1462 aaKnown RBP11.65□□□□□ -0.54
MINDY4-203ENST00000494187 CALD1Q05682 793 aaKnown RBP11.64□□□□□ -0.55
MINDY4-203ENST00000494187 TSHZ3Q63HK5 1081 aa11.64□□□□□ -0.55
MINDY4-203ENST00000494187 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
MINDY4-203ENST00000494187 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
MINDY4-203ENST00000494187 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
MINDY4-203ENST00000494187 UHRF1BP1LA0JNW5 1464 aa11.64□□□□□ -0.55
MINDY4-203ENST00000494187 CLTCL1P53675 1640 aa11.64□□□□□ -0.55
MINDY4-203ENST00000494187 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
MINDY4-203ENST00000494187 CROCC2H7BZ55 1655 aa11.64□□□□□ -0.55
MINDY4-203ENST00000494187 CHMP3Q9Y3E7 222 aa11.63□□□□□ -0.55
MINDY4-203ENST00000494187 TNRQ92752 1358 aa11.63□□□□□ -0.55
MINDY4-203ENST00000494187 FGD1P98174 961 aa11.63□□□□□ -0.55
MINDY4-203ENST00000494187 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
MINDY4-203ENST00000494187 PPIP5K1Q6PFW1 1433 aa11.63□□□□□ -0.55
MINDY4-203ENST00000494187 LMOD3Q0VAK6 560 aa11.63□□□□□ -0.55
MINDY4-203ENST00000494187 LRRC59Q96AG4 307 aaKnown RBP11.63□□□□□ -0.55
MINDY4-203ENST00000494187 FRAT2O75474 233 aaPredicted RBP11.62□□□□□ -0.55
MINDY4-203ENST00000494187 PIP4K2AP48426 406 aaPredicted RBP11.62□□□□□ -0.55
MINDY4-203ENST00000494187 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
MINDY4-203ENST00000494187 MPRIPQ6WCQ1 1025 aa11.62□□□□□ -0.55
MINDY4-203ENST00000494187 MAP4K4O95819 1239 aaPredicted RBP11.62□□□□□ -0.55
MINDY4-203ENST00000494187 CHRNA2Q15822 529 aa11.62□□□□□ -0.55
MINDY4-203ENST00000494187 ANKLE2Q86XL3 938 aa11.61□□□□□ -0.55
MINDY4-203ENST00000494187 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
MINDY4-203ENST00000494187 EXOC6BQ9Y2D4 811 aa11.61□□□□□ -0.55
MINDY4-203ENST00000494187 TTC21BQ7Z4L5 1316 aa11.61□□□□□ -0.55
MINDY4-203ENST00000494187 HSCBQ8IWL3 235 aa11.61□□□□□ -0.55
MINDY4-203ENST00000494187 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
MINDY4-203ENST00000494187 E9PCH4 1651 aa11.6□□□□□ -0.55
MINDY4-203ENST00000494187 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
MINDY4-203ENST00000494187 STRN4Q9NRL3 753 aa11.6□□□□□ -0.55
MINDY4-203ENST00000494187 ORAI2Q96SN7 254 aa11.59□□□□□ -0.55
MINDY4-203ENST00000494187 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
MINDY4-203ENST00000494187 IL1RAPL2Q9NP60 686 aa11.59□□□□□ -0.55
MINDY4-203ENST00000494187 C16orf71Q8IYS4 520 aaPredicted RBP11.59□□□□□ -0.55
MINDY4-203ENST00000494187 ZMYND15Q9H091 742 aa11.59□□□□□ -0.55
MINDY4-203ENST00000494187 C1orf141Q5JVX7 400 aa11.58□□□□□ -0.56
MINDY4-203ENST00000494187 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.56
MINDY4-203ENST00000494187 RNF123Q5XPI4 1314 aa11.58□□□□□ -0.56
MINDY4-203ENST00000494187 MYL6BP14649 208 aa11.58□□□□□ -0.56
MINDY4-203ENST00000494187 NFKBIBQ15653 356 aa11.58□□□□□ -0.56
MINDY4-203ENST00000494187 TRPM1Q7Z4N2 1603 aa11.58□□□□□ -0.56
MINDY4-203ENST00000494187 TRPM2O94759 1503 aa11.58□□□□□ -0.56
MINDY4-203ENST00000494187 POLR3AO14802 1390 aaPredicted RBP11.58□□□□□ -0.56
MINDY4-203ENST00000494187 ZNF530Q6P9A1 599 aaPredicted RBP11.58□□□□□ -0.56
MINDY4-203ENST00000494187 EIF2AK4Q9P2K8 1649 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms