RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 EIF3AQ14152 1382 aaKnown RBP8.72□□□□□ -1.01
RBM39-237ENST00000492779 PANK3Q9H999 370 aa8.72□□□□□ -1.01
RBM39-237ENST00000492779 XRN1Q8IZH2 1706 aaKnown RBP8.72□□□□□ -1.01
RBM39-237ENST00000492779 QRICH2Q9H0J4 1663 aa8.72□□□□□ -1.01
RBM39-237ENST00000492779 NUDT16Q96DE0 195 aaKnown RBP8.71□□□□□ -1.01
RBM39-237ENST00000492779 BACH2Q9BYV9 841 aa8.71□□□□□ -1.01
RBM39-237ENST00000492779 SPINK5Q9NQ38 1064 aaPredicted RBP8.71□□□□□ -1.01
RBM39-237ENST00000492779 LRRC7Q96NW7 1537 aa8.71□□□□□ -1.01
RBM39-237ENST00000492779 ADAMTS8Q9UP79 889 aa8.71□□□□□ -1.02
RBM39-237ENST00000492779 PIK3R4Q99570 1358 aa8.71□□□□□ -1.02
RBM39-237ENST00000492779 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
RBM39-237ENST00000492779 CPS1P31327 1500 aa8.7□□□□□ -1.02
RBM39-237ENST00000492779 PTCH1Q13635 1447 aa8.7□□□□□ -1.02
RBM39-237ENST00000492779 FAM135BQ49AJ0 1406 aa8.7□□□□□ -1.02
RBM39-237ENST00000492779 ESCO1Q5FWF5 840 aa8.7□□□□□ -1.02
RBM39-237ENST00000492779 CARD14Q9BXL6 1004 aa8.7□□□□□ -1.02
RBM39-237ENST00000492779 C19orf44Q9H6X5 657 aa8.7□□□□□ -1.02
RBM39-237ENST00000492779 DIP2AQ14689 1571 aa8.7□□□□□ -1.02
RBM39-237ENST00000492779 EVC2Q86UK5 1308 aa8.7□□□□□ -1.02
RBM39-237ENST00000492779 FOXO3O43524 673 aa8.69□□□□□ -1.02
RBM39-237ENST00000492779 FBLN1P23142 703 aa8.69□□□□□ -1.02
RBM39-237ENST00000492779 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
RBM39-237ENST00000492779 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
RBM39-237ENST00000492779 RALBP1Q15311 655 aa8.69□□□□□ -1.02
RBM39-237ENST00000492779 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
RBM39-237ENST00000492779 NALCNQ8IZF0 1738 aa8.69□□□□□ -1.02
RBM39-237ENST00000492779 DLC1Q96QB1 1528 aa8.68□□□□□ -1.02
RBM39-237ENST00000492779 LTBP4Q8N2S1 1624 aa8.68□□□□□ -1.02
RBM39-237ENST00000492779 NUTM2GQ5VZR2 741 aa8.68□□□□□ -1.02
RBM39-237ENST00000492779 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
RBM39-237ENST00000492779 ZRANB1Q9UGI0 708 aa8.68□□□□□ -1.02
RBM39-237ENST00000492779 XIRP1Q702N8 1843 aaKnown RBP8.68□□□□□ -1.02
RBM39-237ENST00000492779 ATF3P18847 181 aa8.68□□□□□ -1.02
RBM39-237ENST00000492779 ANP32AP39687 249 aaKnown RBP8.68□□□□□ -1.02
RBM39-237ENST00000492779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.68□□□□□ -1.02
RBM39-237ENST00000492779 RGPD8O14715 1765 aaPredicted RBP8.67□□□□□ -1.02
RBM39-237ENST00000492779 NWD1Q149M9 1564 aa8.67□□□□□ -1.02
RBM39-237ENST00000492779 ADGRL3Q9HAR2 1447 aa8.67□□□□□ -1.02
RBM39-237ENST00000492779 BLMP54132 1417 aaPredicted RBP8.67□□□□□ -1.02
RBM39-237ENST00000492779 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
RBM39-237ENST00000492779 SBNO2Q9Y2G9 1366 aa8.66□□□□□ -1.02
RBM39-237ENST00000492779 SLAIN2Q9P270 581 aa8.66□□□□□ -1.02
RBM39-237ENST00000492779 CCDC61Q9Y6R9 512 aa8.66□□□□□ -1.02
RBM39-237ENST00000492779 KNDC1Q76NI1 1749 aa8.66□□□□□ -1.02
RBM39-237ENST00000492779 ACEP12821 1306 aa8.66□□□□□ -1.02
RBM39-237ENST00000492779 NKTRP30414 1462 aaKnown RBP8.66□□□□□ -1.02
RBM39-237ENST00000492779 ATP7BP35670 1465 aa8.66□□□□□ -1.02
RBM39-237ENST00000492779 PPIP5K1Q6PFW1 1433 aa8.66□□□□□ -1.02
RBM39-237ENST00000492779 KDM2BQ8NHM5 1336 aa8.65□□□□□ -1.02
RBM39-237ENST00000492779 TNNT2P45379 298 aaPredicted RBP8.65□□□□□ -1.02
RBM39-237ENST00000492779 CCDC146Q8IYE0 955 aa8.65□□□□□ -1.02
RBM39-237ENST00000492779 A0A1W2PP64 1363 aa8.65□□□□□ -1.02
RBM39-237ENST00000492779 MSH6P52701 1360 aa8.65□□□□□ -1.02
RBM39-237ENST00000492779 USP32Q8NFA0 1604 aa8.65□□□□□ -1.02
RBM39-237ENST00000492779 SOX12O15370 315 aa8.65□□□□□ -1.03
RBM39-237ENST00000492779 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.03
RBM39-237ENST00000492779 NGDNQ8NEJ9 315 aaKnown RBP8.65□□□□□ -1.03
RBM39-237ENST00000492779 BRINP3Q76B58 766 aa8.64□□□□□ -1.03
RBM39-237ENST00000492779 CD163L1Q9NR16 1453 aa8.64□□□□□ -1.03
RBM39-237ENST00000492779 UBAP1LF5GYI3 381 aa8.64□□□□□ -1.03
RBM39-237ENST00000492779 LMOD2Q6P5Q4 547 aa8.64□□□□□ -1.03
RBM39-237ENST00000492779 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
RBM39-237ENST00000492779 FBXO3Q9UK99 471 aa8.64□□□□□ -1.03
RBM39-237ENST00000492779 PHF8Q9UPP1 1060 aa8.64□□□□□ -1.03
RBM39-237ENST00000492779 MST1RQ04912 1400 aa8.64□□□□□ -1.03
RBM39-237ENST00000492779 ZNF521Q96K83 1311 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 C1orf167Q5SNV9 1468 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 TCERG1O14776 1098 aaKnown RBP8.63□□□□□ -1.03
RBM39-237ENST00000492779 NEFMP07197 916 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 PPP2R1AP30153 589 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 CADPS2Q86UW7 1296 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 NME9Q86XW9 330 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 CERKQ8TCT0 537 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 BCAR3O75815 825 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 C8orf34Q49A92 452 aa8.63□□□□□ -1.03
RBM39-237ENST00000492779 MYOM1P52179 1685 aa8.62□□□□□ -1.03
RBM39-237ENST00000492779 TNNQ9UQP3 1299 aa8.62□□□□□ -1.03
RBM39-237ENST00000492779 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
RBM39-237ENST00000492779 CABLES1Q8TDN4 633 aa8.62□□□□□ -1.03
RBM39-237ENST00000492779 BRPF3Q9ULD4 1205 aa8.62□□□□□ -1.03
RBM39-237ENST00000492779 NSD3Q9BZ95 1437 aa8.61□□□□□ -1.03
RBM39-237ENST00000492779 PSME1Q06323 249 aa8.61□□□□□ -1.03
RBM39-237ENST00000492779 PLEKHG3A1L390 1219 aa8.6□□□□□ -1.03
RBM39-237ENST00000492779 SEC24BO95487 1268 aa8.6□□□□□ -1.03
RBM39-237ENST00000492779 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
RBM39-237ENST00000492779 ADGRB2O60241 1585 aa8.6□□□□□ -1.03
RBM39-237ENST00000492779 FYB1O15117 783 aa8.6□□□□□ -1.03
RBM39-237ENST00000492779 IGHDP01880 384 aa8.6□□□□□ -1.03
RBM39-237ENST00000492779 KNSTRNQ9Y448 316 aa8.6□□□□□ -1.03
RBM39-237ENST00000492779 CDC42BPGQ6DT37 1551 aa8.59□□□□□ -1.03
RBM39-237ENST00000492779 KRT28Q7Z3Y7 464 aa8.59□□□□□ -1.03
RBM39-237ENST00000492779 FMN2Q9NZ56 1722 aa8.59□□□□□ -1.03
RBM39-237ENST00000492779 RGS3P49796 1198 aa8.59□□□□□ -1.03
RBM39-237ENST00000492779 PDE3BQ13370 1112 aa8.59□□□□□ -1.03
RBM39-237ENST00000492779 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
RBM39-237ENST00000492779 CPSF1Q10570 1443 aaKnown RBP8.59□□□□□ -1.03
RBM39-237ENST00000492779 USP19O94966 1318 aa8.59□□□□□ -1.04
RBM39-237ENST00000492779 ANKRD36BQ8N2N9 1353 aa8.58□□□□□ -1.04
RBM39-237ENST00000492779 HDGFL2Q7Z4V5 671 aaPredicted RBP8.58□□□□□ -1.04
RBM39-237ENST00000492779 ABTB2Q8N961 1025 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms