RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 IFIT2P09913 472 aaKnown RBP25.48■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 HSP90AB4PQ58FF6 505 aa25.48■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 SASS6Q6UVJ0 657 aa25.48■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 XRCC6P12956 609 aaKnown RBP eCLIP25.48■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 GNAI3P08754 354 aa25.48■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 RNF20Q5VTR2 975 aa25.48■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 CLCN1P35523 988 aa25.47■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 PRAG1Q86YV5 1406 aa25.46■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 ALDH1L2Q3SY69 923 aa25.46■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 TEX14Q8IWB6 1497 aa25.46■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 FCHSD2O94868 740 aa25.45■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 ABCC11Q96J66 1382 aa25.45■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 TRIM27P14373 513 aa25.45■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 C9orf78Q9NZ63 289 aaPredicted RBP25.44■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 EIF2S2P20042 333 aaKnown RBP25.44■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 GORABQ5T7V8 394 aa25.44■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 CCDC34Q96HJ3 373 aa25.44■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 PCDHB15Q9Y5E8 787 aa25.44■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 WDR33Q9C0J8 1336 aaKnown RBP25.44■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 PLEKHH1Q9ULM0 1364 aa25.43■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 UBTFL1P0CB47 393 aaPredicted RBP25.43■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 SSFA2P28290 1259 aa25.43■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 PER1O15534 1290 aaPredicted RBP25.42■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 KDM2BQ8NHM5 1336 aa25.42■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 PRAM1Q96QH2 718 aa25.41■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 CCDC27Q2M243 656 aa25.41■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 RPAP2Q8IXW5 612 aaPredicted RBP25.41■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 GNAI2P04899 355 aa25.41■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 RPGRIP1LQ68CZ1 1315 aa25.41■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 CNTROBQ8N137 903 aa25.41■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 ASXL1Q8IXJ9 1541 aa25.4■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 BMP2KLQ5H9B9 411 aa25.4■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 TEFQ10587 303 aa25.39■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 FIBPO43427 364 aa25.39■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 TESK2Q96S53 571 aa25.39■■□□□ 1.66
CHKB-CPT1B-203ENST00000492556 HDAC1Q13547 482 aaPredicted RBP25.38■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 NUP160Q12769 1436 aa25.38■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 SYCE3A1L190 88 aa25.38■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 PDCL3Q9H2J4 239 aa25.38■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 UHRF1BP1Q6BDS2 1440 aa25.38■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 NFE2L2Q16236 605 aa25.38■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 EID1Q9Y6B2 187 aa25.37■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 PZPP20742 1482 aa25.37■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 PANK2Q9BZ23 570 aa25.37■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 GRIN2AQ12879 1464 aa25.37■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 SLC4A2P04920 1241 aa25.37■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 ATAD2Q6PL18 1390 aa25.36■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 CCT4P50991 539 aaKnown RBP25.36■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 GOLGA6L1Q8N7Z2 621 aa25.36■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 CABP1Q9NZU7 370 aa25.36■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 LRRCC1Q9C099 1032 aa25.36■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 SURF6O75683 361 aaKnown RBP25.36■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 TRIM5Q9C035 493 aa25.36■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 G3BP1Q13283 466 aaKnown RBP eCLIP25.35■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 SPATA31E1Q6ZUB1 1445 aa25.35■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 CCDC30Q5VVM6 783 aa25.35■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 CCDC73Q6ZRK6 1079 aa25.35■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 PSMA5P28066 241 aa25.34■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 CDK19Q9BWU1 502 aa25.34■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 ITSN2Q9NZM3 1697 aa25.34■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 KLHL40Q2TBA0 621 aa25.34■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 SEC24BO95487 1268 aa25.33■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 PDCP20941 246 aa25.33■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 MPNDQ8N594 471 aa25.33■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 INSRP06213 1382 aa25.33■■□□□ 1.65
CHKB-CPT1B-203ENST00000492556 BAG4O95429 457 aaKnown RBP25.32■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 TPD52L1Q16890 204 aaPredicted RBP25.32■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 TBC1D9Q6ZT07 1266 aa25.32■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 HOMER1Q86YM7 354 aa25.32■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 RAPGEF6Q8TEU7 1601 aa25.32■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 NUP153P49790 1475 aaKnown RBP25.32■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 CCDC192P0DO97 292 aa25.32■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 NEXNQ0ZGT2 675 aa25.31■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 PIK3C2GO75747 1445 aa25.31■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 ADGRF5Q8IZF2 1346 aa25.31■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 ZMYM4Q5VZL5 1548 aa25.31■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 SPC24Q8NBT2 197 aa25.31■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 SRCIN1Q9C0H9 1055 aa25.3■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 TEX35Q5T0J7 233 aa25.3■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 CLASRPQ8N2M8 674 aaKnown RBP25.3■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 C1orf141Q5JVX7 400 aa25.3■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 SNX21Q969T3 373 aa25.3■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 FAM135AQ9P2D6 1515 aa25.3■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 NUCB1Q02818 461 aa25.29■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 AEBP1Q8IUX7 1158 aa25.29■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 DNMT1P26358 1616 aaKnown RBP25.29■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 XPCQ01831 940 aaPredicted RBP25.29■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 TAF7LQ5H9L4 462 aa25.29■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 CSB-PGBD3P0DP91 1061 aa25.28■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 SULT6B1Q6IMI4 303 aa25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 COL17A1Q9UMD9 1497 aaPredicted RBP25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 CCAR2Q8N163 923 aaKnown RBP25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 GAS2L2Q8NHY3 880 aa25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 GPS2Q13227 327 aa25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 CCDC9Q9Y3X0 531 aaKnown RBP25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 NSD2O96028 1365 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms