RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 MYO5BQ9ULV0 1848 aa20.1■□□□□ 0.81
BRD9-208ENST00000489816 TRIM27P14373 513 aa20.09■□□□□ 0.81
BRD9-208ENST00000489816 NOB1Q9ULX3 412 aaKnown RBP20.09■□□□□ 0.81
BRD9-208ENST00000489816 SLKQ9H2G2 1235 aaPredicted RBP20.09■□□□□ 0.81
BRD9-208ENST00000489816 NEO1Q92859 1461 aa20.09■□□□□ 0.81
BRD9-208ENST00000489816 NME9Q86XW9 330 aa20.08■□□□□ 0.8
BRD9-208ENST00000489816 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.8
BRD9-208ENST00000489816 ABCC11Q96J66 1382 aa20.08■□□□□ 0.8
BRD9-208ENST00000489816 PIK3C2BO00750 1634 aa20.08■□□□□ 0.8
BRD9-208ENST00000489816 MVPQ14764 893 aaKnown RBP20.07■□□□□ 0.8
BRD9-208ENST00000489816 RRS1Q15050 365 aaKnown RBP20.07■□□□□ 0.8
BRD9-208ENST00000489816 RTN4Q9NQC3 1192 aaKnown RBP20.07■□□□□ 0.8
BRD9-208ENST00000489816 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
BRD9-208ENST00000489816 CCDC27Q2M243 656 aa20.06■□□□□ 0.8
BRD9-208ENST00000489816 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
BRD9-208ENST00000489816 IQSEC2Q5JU85 1478 aa20.06■□□□□ 0.8
BRD9-208ENST00000489816 FRAT2O75474 233 aaPredicted RBP20.05■□□□□ 0.8
BRD9-208ENST00000489816 TSPOAP1O95153 1857 aa20.05■□□□□ 0.8
BRD9-208ENST00000489816 CFAP74Q9C0B2 1584 aa20.05■□□□□ 0.8
BRD9-208ENST00000489816 POLKQ9UBT6 870 aa20.05■□□□□ 0.8
BRD9-208ENST00000489816 ZC3H13Q5T200 1668 aaKnown RBP20.05■□□□□ 0.8
BRD9-208ENST00000489816 USP19O94966 1318 aa20.05■□□□□ 0.8
BRD9-208ENST00000489816 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
BRD9-208ENST00000489816 RWDD1Q9H446 243 aaPredicted RBP20.04■□□□□ 0.8
BRD9-208ENST00000489816 ESF1Q9H501 851 aaKnown RBP20.04■□□□□ 0.8
BRD9-208ENST00000489816 ATAD2Q6PL18 1390 aa20.03■□□□□ 0.8
BRD9-208ENST00000489816 PTPRMP28827 1452 aa20.03■□□□□ 0.8
BRD9-208ENST00000489816 DCTN1Q14203 1278 aa20.02■□□□□ 0.8
BRD9-208ENST00000489816 C1orf115Q9H7X2 142 aa20.02■□□□□ 0.8
BRD9-208ENST00000489816 PUS7Q96PZ0 661 aaKnown RBP20.01■□□□□ 0.79
BRD9-208ENST00000489816 NSD2O96028 1365 aa20.01■□□□□ 0.79
BRD9-208ENST00000489816 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
BRD9-208ENST00000489816 ATF7IPQ6VMQ6 1270 aa20.01■□□□□ 0.79
BRD9-208ENST00000489816 TSPYL6Q8N831 410 aa20■□□□□ 0.79
BRD9-208ENST00000489816 IL27Q8NEV9 243 aa20■□□□□ 0.79
BRD9-208ENST00000489816 CD163L1Q9NR16 1453 aa20■□□□□ 0.79
BRD9-208ENST00000489816 ARHGAP31Q2M1Z3 1444 aa20■□□□□ 0.79
BRD9-208ENST00000489816 MFAP1P55081 439 aaKnown RBP19.98■□□□□ 0.79
BRD9-208ENST00000489816 RICTORQ6R327 1708 aa19.97■□□□□ 0.79
BRD9-208ENST00000489816 LNPKQ9C0E8 428 aa19.97■□□□□ 0.79
BRD9-208ENST00000489816 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
BRD9-208ENST00000489816 METP08581 1390 aa19.96■□□□□ 0.79
BRD9-208ENST00000489816 NINLQ9Y2I6 1382 aa19.96■□□□□ 0.79
BRD9-208ENST00000489816 RSPH6AQ9H0K4 717 aa19.95■□□□□ 0.78
BRD9-208ENST00000489816 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
BRD9-208ENST00000489816 ALKQ9UM73 1620 aa19.94■□□□□ 0.78
BRD9-208ENST00000489816 WASLO00401 505 aaPredicted RBP19.94■□□□□ 0.78
BRD9-208ENST00000489816 FCHSD2O94868 740 aa19.94■□□□□ 0.78
BRD9-208ENST00000489816 ARXQ96QS3 562 aa19.94■□□□□ 0.78
BRD9-208ENST00000489816 UPF2Q9HAU5 1272 aaKnown RBP19.94■□□□□ 0.78
BRD9-208ENST00000489816 USP35Q9P2H5 1018 aa19.94■□□□□ 0.78
BRD9-208ENST00000489816 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
BRD9-208ENST00000489816 ZFYVE9O95405 1425 aa19.93■□□□□ 0.78
BRD9-208ENST00000489816 RIMS2Q9UQ26 1411 aa19.93■□□□□ 0.78
BRD9-208ENST00000489816 CEBPAP49715 358 aaPredicted RBP19.93■□□□□ 0.78
BRD9-208ENST00000489816 DDX19BQ9UMR2 479 aa19.93■□□□□ 0.78
BRD9-208ENST00000489816 KRT24Q2M2I5 525 aa19.91■□□□□ 0.78
BRD9-208ENST00000489816 AEBP1Q8IUX7 1158 aa19.91■□□□□ 0.78
BRD9-208ENST00000489816 SLC26A8Q96RN1 970 aa19.91■□□□□ 0.78
BRD9-208ENST00000489816 NLRP1Q9C000 1473 aa19.91■□□□□ 0.78
BRD9-208ENST00000489816 COG3Q96JB2 828 aa19.9■□□□□ 0.78
BRD9-208ENST00000489816 ARHGEF40Q8TER5 1519 aa19.9■□□□□ 0.78
BRD9-208ENST00000489816 GSE1Q14687 1217 aa19.9■□□□□ 0.78
BRD9-208ENST00000489816 COL3A1P02461 1466 aaPredicted RBP19.9■□□□□ 0.78
BRD9-208ENST00000489816 PPIP5K1Q6PFW1 1433 aa19.89■□□□□ 0.77
BRD9-208ENST00000489816 NFE2L2Q16236 605 aa19.88■□□□□ 0.77
BRD9-208ENST00000489816 C8orf58Q8NAV2 365 aa19.88■□□□□ 0.77
BRD9-208ENST00000489816 MBIPQ9NS73 344 aa19.88■□□□□ 0.77
BRD9-208ENST00000489816 ZBTB40Q9NUA8 1239 aa19.88■□□□□ 0.77
BRD9-208ENST00000489816 BRPF3Q9ULD4 1205 aa19.88■□□□□ 0.77
BRD9-208ENST00000489816 IPO8O15397 1037 aaKnown RBP19.87■□□□□ 0.77
BRD9-208ENST00000489816 CCDC61Q9Y6R9 512 aa19.87■□□□□ 0.77
BRD9-208ENST00000489816 A2ML1A8K2U0 1454 aa19.87■□□□□ 0.77
BRD9-208ENST00000489816 USP32Q8NFA0 1604 aa19.87■□□□□ 0.77
BRD9-208ENST00000489816 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
BRD9-208ENST00000489816 IL13P35225 146 aa19.87■□□□□ 0.77
BRD9-208ENST00000489816 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
BRD9-208ENST00000489816 TBC1D2Q9BYX2 928 aa19.87■□□□□ 0.77
BRD9-208ENST00000489816 VAMP4O75379 141 aa19.86■□□□□ 0.77
BRD9-208ENST00000489816 BECN1Q14457 450 aa19.86■□□□□ 0.77
BRD9-208ENST00000489816 TBC1D32Q96NH3 1257 aa19.85■□□□□ 0.77
BRD9-208ENST00000489816 MIS18AQ9NYP9 233 aa19.85■□□□□ 0.77
BRD9-208ENST00000489816 PNPLA6Q8IY17 1366 aa19.85■□□□□ 0.77
BRD9-208ENST00000489816 PLEKHG5O94827 1062 aa19.85■□□□□ 0.77
BRD9-208ENST00000489816 SULT6B1Q6IMI4 303 aa19.85■□□□□ 0.77
BRD9-208ENST00000489816 APBB1O00213 710 aa19.85■□□□□ 0.77
BRD9-208ENST00000489816 PRR36Q9H6K5 1346 aa19.84■□□□□ 0.77
BRD9-208ENST00000489816 ZMYM3Q14202 1370 aa19.84■□□□□ 0.77
BRD9-208ENST00000489816 KIF16BQ96L93 1317 aa19.84■□□□□ 0.77
BRD9-208ENST00000489816 CT47B1P0C2W7 299 aaPredicted RBP19.84■□□□□ 0.77
BRD9-208ENST00000489816 TWISTNBQ3B726 338 aaPredicted RBP19.84■□□□□ 0.77
BRD9-208ENST00000489816 MCM10Q7L590 875 aa19.84■□□□□ 0.77
BRD9-208ENST00000489816 C22orf23Q9BZE7 217 aa19.83■□□□□ 0.76
BRD9-208ENST00000489816 CLTCQ00610 1675 aaKnown RBP19.83■□□□□ 0.76
BRD9-208ENST00000489816 LRRC7Q96NW7 1537 aa19.83■□□□□ 0.76
BRD9-208ENST00000489816 ADGRB2O60241 1585 aa19.82■□□□□ 0.76
BRD9-208ENST00000489816 HSP90AB2PQ58FF8 381 aa19.82■□□□□ 0.76
BRD9-208ENST00000489816 IL16Q14005 1332 aa19.82■□□□□ 0.76
BRD9-208ENST00000489816 HDAC1Q13547 482 aaPredicted RBP19.81■□□□□ 0.76
BRD9-208ENST00000489816 AAMPQ13685 434 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms