RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 POLR1AO95602 1720 aaPredicted RBP8.71□□□□□ -1.02
SF3A3-208ENST00000489537 UGGT1Q9NYU2 1555 aa8.7□□□□□ -1.02
SF3A3-208ENST00000489537 KIF7Q2M1P5 1343 aa8.7□□□□□ -1.02
SF3A3-208ENST00000489537 NLRP1Q9C000 1473 aa8.7□□□□□ -1.02
SF3A3-208ENST00000489537 UBAP1LF5GYI3 381 aa8.69□□□□□ -1.02
SF3A3-208ENST00000489537 HOXB1P14653 301 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-208ENST00000489537 HS3ST6Q96QI5 342 aa8.69□□□□□ -1.02
SF3A3-208ENST00000489537 ZSWIM6Q9HCJ5 1215 aa8.69□□□□□ -1.02
SF3A3-208ENST00000489537 NPHP4O75161 1426 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-208ENST00000489537 MED14O60244 1454 aa8.69□□□□□ -1.02
SF3A3-208ENST00000489537 IQSEC2Q5JU85 1478 aa8.69□□□□□ -1.02
SF3A3-208ENST00000489537 UBR1Q8IWV7 1749 aa8.68□□□□□ -1.02
SF3A3-208ENST00000489537 KIAA1210Q9ULL0 1709 aa8.68□□□□□ -1.02
SF3A3-208ENST00000489537 ST20-MTHFSA0A0A6YYL1 179 aa8.68□□□□□ -1.02
SF3A3-208ENST00000489537 HDGFP51858 240 aaKnown RBP8.68□□□□□ -1.02
SF3A3-208ENST00000489537 RALBP1Q15311 655 aa8.68□□□□□ -1.02
SF3A3-208ENST00000489537 HIRIP3Q9BW71 556 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-208ENST00000489537 NOS1P29475 1434 aa8.68□□□□□ -1.02
SF3A3-208ENST00000489537 SCAF11Q99590 1463 aaKnown RBP8.68□□□□□ -1.02
SF3A3-208ENST00000489537 TRPM1Q7Z4N2 1603 aa8.68□□□□□ -1.02
SF3A3-208ENST00000489537 SYNMO15061 1565 aa8.67□□□□□ -1.02
SF3A3-208ENST00000489537 ZFYVE9O95405 1425 aa8.67□□□□□ -1.02
SF3A3-208ENST00000489537 ERBB3P21860 1342 aa8.67□□□□□ -1.02
SF3A3-208ENST00000489537 ANKLE2Q86XL3 938 aa8.67□□□□□ -1.02
SF3A3-208ENST00000489537 ARHGAP23Q9P227 1491 aa8.67□□□□□ -1.02
SF3A3-208ENST00000489537 KIF1BO60333 1816 aa8.66□□□□□ -1.02
SF3A3-208ENST00000489537 IQGAP1P46940 1657 aa8.66□□□□□ -1.02
SF3A3-208ENST00000489537 PIK3C2BO00750 1634 aa8.66□□□□□ -1.02
SF3A3-208ENST00000489537 DISP3Q9P2K9 1392 aa8.66□□□□□ -1.02
SF3A3-208ENST00000489537 SBNO2Q9Y2G9 1366 aa8.66□□□□□ -1.02
SF3A3-208ENST00000489537 HSPA1LP34931 641 aa8.66□□□□□ -1.02
SF3A3-208ENST00000489537 IDI1Q13907 227 aa8.66□□□□□ -1.02
SF3A3-208ENST00000489537 TMEM92Q6UXU6 159 aa8.66□□□□□ -1.02
SF3A3-208ENST00000489537 THEMISQ8N1K5 641 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-208ENST00000489537 PUS7Q96PZ0 661 aaKnown RBP8.66□□□□□ -1.02
SF3A3-208ENST00000489537 CLTCL1P53675 1640 aa8.65□□□□□ -1.02
SF3A3-208ENST00000489537 ADGRB3O60242 1522 aa8.65□□□□□ -1.02
SF3A3-208ENST00000489537 NRXN1Q9ULB1 1477 aa8.65□□□□□ -1.02
SF3A3-208ENST00000489537 PIP4K2BP78356 416 aa8.65□□□□□ -1.02
SF3A3-208ENST00000489537 YTHDC1Q96MU7 727 aaKnown RBP8.65□□□□□ -1.02
SF3A3-208ENST00000489537 PRKRIP1Q9H875 184 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-208ENST00000489537 LRRC7Q96NW7 1537 aa8.64□□□□□ -1.03
SF3A3-208ENST00000489537 RBM33Q96EV2 1170 aaKnown RBP8.64□□□□□ -1.03
SF3A3-208ENST00000489537 SETBP1Q9Y6X0 1596 aa8.64□□□□□ -1.03
SF3A3-208ENST00000489537 SLIT1O75093 1534 aa8.64□□□□□ -1.03
SF3A3-208ENST00000489537 XIRP1Q702N8 1843 aaKnown RBP8.64□□□□□ -1.03
SF3A3-208ENST00000489537 TXNDC2Q86VQ3 553 aa8.63□□□□□ -1.03
SF3A3-208ENST00000489537 TMC2Q8TDI7 906 aa8.63□□□□□ -1.03
SF3A3-208ENST00000489537 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
SF3A3-208ENST00000489537 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
SF3A3-208ENST00000489537 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
SF3A3-208ENST00000489537 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.62□□□□□ -1.03
SF3A3-208ENST00000489537 C14orf93Q9H972 538 aaKnown RBP8.62□□□□□ -1.03
SF3A3-208ENST00000489537 CPS1P31327 1500 aa8.62□□□□□ -1.03
SF3A3-208ENST00000489537 NBPF1Q3BBV0 1214 aa8.61□□□□□ -1.03
SF3A3-208ENST00000489537 SLC26A8Q96RN1 970 aa8.61□□□□□ -1.03
SF3A3-208ENST00000489537 TESK2Q96S53 571 aa8.61□□□□□ -1.03
SF3A3-208ENST00000489537 PIK3C2GO75747 1445 aa8.61□□□□□ -1.03
SF3A3-208ENST00000489537 NPC1L1Q9UHC9 1359 aa8.61□□□□□ -1.03
SF3A3-208ENST00000489537 MYO5BQ9ULV0 1848 aa8.6□□□□□ -1.03
SF3A3-208ENST00000489537 C11orf95C9JLR9 678 aaPredicted RBP8.6□□□□□ -1.03
SF3A3-208ENST00000489537 MRS2Q9HD23 443 aa8.6□□□□□ -1.03
SF3A3-208ENST00000489537 RYDENQ9NUL5 291 aaKnown RBP8.6□□□□□ -1.03
SF3A3-208ENST00000489537 BRD4O60885 1362 aaPredicted RBP8.6□□□□□ -1.03
SF3A3-208ENST00000489537 INSRP06213 1382 aa8.6□□□□□ -1.03
SF3A3-208ENST00000489537 MYBBP1AQ9BQG0 1328 aaKnown RBP8.59□□□□□ -1.03
SF3A3-208ENST00000489537 SPNS2Q8IVW8 549 aa8.59□□□□□ -1.03
SF3A3-208ENST00000489537 POLR3GLQ9BT43 218 aa8.59□□□□□ -1.03
SF3A3-208ENST00000489537 KNSTRNQ9Y448 316 aa8.59□□□□□ -1.03
SF3A3-208ENST00000489537 NINLQ9Y2I6 1382 aa8.59□□□□□ -1.03
SF3A3-208ENST00000489537 CENPJQ9HC77 1338 aaPredicted RBP8.58□□□□□ -1.04
SF3A3-208ENST00000489537 C2orf72A6NCS6 295 aa8.58□□□□□ -1.04
SF3A3-208ENST00000489537 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
SF3A3-208ENST00000489537 NUTM2DQ5VT03 806 aaPredicted RBP8.58□□□□□ -1.04
SF3A3-208ENST00000489537 NLRP13Q86W25 1043 aa8.58□□□□□ -1.04
SF3A3-208ENST00000489537 TMC1Q8TDI8 760 aa8.58□□□□□ -1.04
SF3A3-208ENST00000489537 ADGRF5Q8IZF2 1346 aa8.57□□□□□ -1.04
SF3A3-208ENST00000489537 MED1Q15648 1581 aaPredicted RBP8.57□□□□□ -1.04
SF3A3-208ENST00000489537 GPR153Q6NV75 609 aa8.57□□□□□ -1.04
SF3A3-208ENST00000489537 TMEM131LA2VDJ0 1609 aa8.57□□□□□ -1.04
SF3A3-208ENST00000489537 IFT172Q9UG01 1749 aa8.57□□□□□ -1.04
SF3A3-208ENST00000489537 POTEB3A0JP26 581 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 SOCS7O14512 581 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 KIF3CO14782 793 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 TOM1O60784 492 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 NEFLP07196 543 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 MMRN1Q13201 1228 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 ARSIQ5FYB1 569 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 POTEBQ6S5H4 581 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 RGS17Q9UGC6 210 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-208ENST00000489537 TMEM94Q12767 1356 aa8.56□□□□□ -1.04
SF3A3-208ENST00000489537 EVC2Q86UK5 1308 aa8.55□□□□□ -1.04
SF3A3-208ENST00000489537 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
SF3A3-208ENST00000489537 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
SF3A3-208ENST00000489537 PARD3Q8TEW0 1356 aa8.55□□□□□ -1.04
SF3A3-208ENST00000489537 KDM5AP29375 1690 aaKnown RBP8.55□□□□□ -1.04
SF3A3-208ENST00000489537 PPLO60437 1756 aa8.55□□□□□ -1.04
SF3A3-208ENST00000489537 ADAMTS13Q76LX8 1427 aa8.54□□□□□ -1.04
SF3A3-208ENST00000489537 KCNA6P17658 529 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms