RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
ABCB1-207ENST00000488737 IGHDP01880 384 aa18.3■□□□□ 0.52
ABCB1-207ENST00000488737 PMFBP1Q8TBY8 1022 aa18.3■□□□□ 0.52
ABCB1-207ENST00000488737 GGNBP2Q9H3C7 697 aa18.3■□□□□ 0.52
ABCB1-207ENST00000488737 STAG3Q9UJ98 1225 aa18.3■□□□□ 0.52
ABCB1-207ENST00000488737 IL16Q14005 1332 aa18.3■□□□□ 0.52
ABCB1-207ENST00000488737 ZMYM3Q14202 1370 aa18.29■□□□□ 0.52
ABCB1-207ENST00000488737 CDK19Q9BWU1 502 aa18.29■□□□□ 0.52
ABCB1-207ENST00000488737 RIMS2Q9UQ26 1411 aa18.29■□□□□ 0.52
ABCB1-207ENST00000488737 MLECQ14165 292 aa18.29■□□□□ 0.52
ABCB1-207ENST00000488737 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
ABCB1-207ENST00000488737 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
ABCB1-207ENST00000488737 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
ABCB1-207ENST00000488737 RGS3P49796 1198 aa18.28■□□□□ 0.52
ABCB1-207ENST00000488737 USP35Q9P2H5 1018 aa18.27■□□□□ 0.52
ABCB1-207ENST00000488737 DEKP35659 375 aaKnown RBP18.26■□□□□ 0.51
ABCB1-207ENST00000488737 TMPOP42166 694 aaKnown RBP18.26■□□□□ 0.51
ABCB1-207ENST00000488737 KNDC1Q76NI1 1749 aa18.25■□□□□ 0.51
ABCB1-207ENST00000488737 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
ABCB1-207ENST00000488737 FER1L4A9Z1Z3 1794 aa18.25■□□□□ 0.51
ABCB1-207ENST00000488737 U2SURPO15042 1029 aaKnown RBP18.24■□□□□ 0.51
ABCB1-207ENST00000488737 DIAPH1O60610 1272 aaKnown RBP18.24■□□□□ 0.51
ABCB1-207ENST00000488737 RLBP1P12271 317 aa18.23■□□□□ 0.51
ABCB1-207ENST00000488737 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
ABCB1-207ENST00000488737 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
ABCB1-207ENST00000488737 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
ABCB1-207ENST00000488737 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
ABCB1-207ENST00000488737 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
ABCB1-207ENST00000488737 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
ABCB1-207ENST00000488737 LRRC7Q96NW7 1537 aa18.2■□□□□ 0.5
ABCB1-207ENST00000488737 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
ABCB1-207ENST00000488737 FCHSD2O94868 740 aa18.2■□□□□ 0.5
ABCB1-207ENST00000488737 RWDD1Q9H446 243 aaPredicted RBP18.2■□□□□ 0.5
ABCB1-207ENST00000488737 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
ABCB1-207ENST00000488737 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
ABCB1-207ENST00000488737 EDC4Q6P2E9 1401 aaKnown RBP18.19■□□□□ 0.5
ABCB1-207ENST00000488737 DZIP1LQ8IYY4 767 aaKnown RBP18.19■□□□□ 0.5
ABCB1-207ENST00000488737 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
ABCB1-207ENST00000488737 FAM135BQ49AJ0 1406 aa18.19■□□□□ 0.5
ABCB1-207ENST00000488737 EXOSC9Q06265 439 aaKnown RBP18.18■□□□□ 0.5
ABCB1-207ENST00000488737 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
ABCB1-207ENST00000488737 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
ABCB1-207ENST00000488737 LAS1LQ9Y4W2 734 aaKnown RBP18.18■□□□□ 0.5
ABCB1-207ENST00000488737 TECPR2O15040 1411 aa18.18■□□□□ 0.5
ABCB1-207ENST00000488737 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
ABCB1-207ENST00000488737 SIRT1Q96EB6 747 aa18.18■□□□□ 0.5
ABCB1-207ENST00000488737 CPS1P31327 1500 aa18.17■□□□□ 0.5
ABCB1-207ENST00000488737 RIPK4P57078 832 aa18.17■□□□□ 0.5
ABCB1-207ENST00000488737 FTSJ3Q8IY81 847 aaKnown RBP18.17■□□□□ 0.5
ABCB1-207ENST00000488737 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
ABCB1-207ENST00000488737 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
ABCB1-207ENST00000488737 WAPLQ7Z5K2 1190 aa18.16■□□□□ 0.5
ABCB1-207ENST00000488737 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
ABCB1-207ENST00000488737 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
ABCB1-207ENST00000488737 AKAP12Q02952 1782 aa18.16■□□□□ 0.5
ABCB1-207ENST00000488737 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
ABCB1-207ENST00000488737 NEFMP07197 916 aa18.16■□□□□ 0.5
ABCB1-207ENST00000488737 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
ABCB1-207ENST00000488737 PPIP5K1Q6PFW1 1433 aa18.16■□□□□ 0.5
ABCB1-207ENST00000488737 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
ABCB1-207ENST00000488737 POLKQ9UBT6 870 aa18.15■□□□□ 0.5
ABCB1-207ENST00000488737 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
ABCB1-207ENST00000488737 ITSN1Q15811 1721 aa18.14■□□□□ 0.5
ABCB1-207ENST00000488737 RSPH6AQ9H0K4 717 aa18.14■□□□□ 0.49
ABCB1-207ENST00000488737 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
ABCB1-207ENST00000488737 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
ABCB1-207ENST00000488737 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.49
ABCB1-207ENST00000488737 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.49
ABCB1-207ENST00000488737 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
ABCB1-207ENST00000488737 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
ABCB1-207ENST00000488737 DDX19BQ9UMR2 479 aa18.14■□□□□ 0.49
ABCB1-207ENST00000488737 USP19O94966 1318 aa18.13■□□□□ 0.49
ABCB1-207ENST00000488737 ATF7IPQ6VMQ6 1270 aa18.13■□□□□ 0.49
ABCB1-207ENST00000488737 PDZRN3Q9UPQ7 1066 aa18.13■□□□□ 0.49
ABCB1-207ENST00000488737 TRIM27P14373 513 aa18.12■□□□□ 0.49
ABCB1-207ENST00000488737 METP08581 1390 aa18.12■□□□□ 0.49
ABCB1-207ENST00000488737 C3P01024 1663 aa18.12■□□□□ 0.49
ABCB1-207ENST00000488737 HDAC1Q13547 482 aaPredicted RBP18.12■□□□□ 0.49
ABCB1-207ENST00000488737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
ABCB1-207ENST00000488737 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
ABCB1-207ENST00000488737 IPO8O15397 1037 aaKnown RBP18.11■□□□□ 0.49
ABCB1-207ENST00000488737 BRPF1P55201 1214 aaPredicted RBP18.11■□□□□ 0.49
ABCB1-207ENST00000488737 CALD1Q05682 793 aaKnown RBP18.11■□□□□ 0.49
ABCB1-207ENST00000488737 ADAMTSL3P82987 1691 aa18.1■□□□□ 0.49
ABCB1-207ENST00000488737 PRKAR2BP31323 418 aa18.09■□□□□ 0.49
ABCB1-207ENST00000488737 NFE2L2Q16236 605 aa18.09■□□□□ 0.49
ABCB1-207ENST00000488737 TNRQ92752 1358 aa18.09■□□□□ 0.49
ABCB1-207ENST00000488737 NUDT16Q96DE0 195 aaKnown RBP18.07■□□□□ 0.48
ABCB1-207ENST00000488737 NOB1Q9ULX3 412 aaKnown RBP18.07■□□□□ 0.48
ABCB1-207ENST00000488737 IL13P35225 146 aa18.07■□□□□ 0.48
ABCB1-207ENST00000488737 SLC4A3P48751 1232 aa18.07■□□□□ 0.48
ABCB1-207ENST00000488737 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
ABCB1-207ENST00000488737 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
ABCB1-207ENST00000488737 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
ABCB1-207ENST00000488737 NRKQ7Z2Y5 1582 aa18.06■□□□□ 0.48
ABCB1-207ENST00000488737 ITPRIPQ8IWB1 547 aa18.06■□□□□ 0.48
ABCB1-207ENST00000488737 ZNF692Q9BU19 519 aaPredicted RBP18.05■□□□□ 0.48
ABCB1-207ENST00000488737 UPF2Q9HAU5 1272 aaKnown RBP18.05■□□□□ 0.48
ABCB1-207ENST00000488737 TMEM2Q9UHN6 1383 aa18.05■□□□□ 0.48
ABCB1-207ENST00000488737 TOPAZ1Q8N9V7 1692 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms