RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	ADGRB2	O60241	1585 aa		13.55	□□□□□ -0.24
PTBP3-208	ENST00000487997	NUTM2F	A1L443	756 aa		13.55	□□□□□ -0.24
PTBP3-208	ENST00000487997	ESCO1	Q5FWF5	840 aa		13.55	□□□□□ -0.24
PTBP3-208	ENST00000487997	KIF1A	Q12756	1690 aa		13.54	□□□□□ -0.24
PTBP3-208	ENST00000487997	ITSN1	Q15811	1721 aa		13.54	□□□□□ -0.24
PTBP3-208	ENST00000487997	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.54	□□□□□ -0.24
PTBP3-208	ENST00000487997	TIMELESS	Q9UNS1	1208 aa		13.54	□□□□□ -0.24
PTBP3-208	ENST00000487997	EIF3A	Q14152	1382 aa	Known RBP	13.54	□□□□□ -0.24
PTBP3-208	ENST00000487997	COL16A1	Q07092	1604 aa	Predicted RBP	13.53	□□□□□ -0.24
PTBP3-208	ENST00000487997	NBPF8	Q3BBV2	869 aa		13.53	□□□□□ -0.24
PTBP3-208	ENST00000487997	ORAI2	Q96SN7	254 aa		13.53	□□□□□ -0.24
PTBP3-208	ENST00000487997	KIF12	Q96FN5	646 aa		13.52	□□□□□ -0.25
PTBP3-208	ENST00000487997	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.52	□□□□□ -0.25
PTBP3-208	ENST00000487997	RALGAPB	Q86X10	1494 aa		13.51	□□□□□ -0.25
PTBP3-208	ENST00000487997	VASP	P50552	380 aa	Predicted RBP	13.51	□□□□□ -0.25
PTBP3-208	ENST00000487997	CARD11	Q9BXL7	1154 aa		13.51	□□□□□ -0.25
PTBP3-208	ENST00000487997	SHPRH	Q149N8	1683 aa		13.5	□□□□□ -0.25
PTBP3-208	ENST00000487997	WASL	O00401	505 aa	Predicted RBP	13.5	□□□□□ -0.25
PTBP3-208	ENST00000487997	USP32	Q8NFA0	1604 aa		13.5	□□□□□ -0.25
PTBP3-208	ENST00000487997	ANKAR	Q7Z5J8	1434 aa		13.49	□□□□□ -0.25
PTBP3-208	ENST00000487997	JCAD	Q9P266	1359 aa		13.49	□□□□□ -0.25
PTBP3-208	ENST00000487997	NPHP3	Q7Z494	1330 aa		13.49	□□□□□ -0.25
PTBP3-208	ENST00000487997	LHX8	Q68G74	356 aa		13.49	□□□□□ -0.25
PTBP3-208	ENST00000487997	LRRC59	Q96AG4	307 aa	Known RBP	13.49	□□□□□ -0.25
PTBP3-208	ENST00000487997	TULP4	Q9NRJ4	1543 aa		13.49	□□□□□ -0.25
PTBP3-208	ENST00000487997	FOXO3	O43524	673 aa		13.48	□□□□□ -0.25
PTBP3-208	ENST00000487997	DDX17	Q92841	729 aa	Known RBP	13.48	□□□□□ -0.25
PTBP3-208	ENST00000487997	GPRASP1	Q5JY77	1395 aa		13.47	□□□□□ -0.25
PTBP3-208	ENST00000487997	MED1	Q15648	1581 aa	Predicted RBP	13.47	□□□□□ -0.25
PTBP3-208	ENST00000487997	CDK19	Q9BWU1	502 aa		13.47	□□□□□ -0.25
PTBP3-208	ENST00000487997	PHF8	Q9UPP1	1060 aa		13.47	□□□□□ -0.25
PTBP3-208	ENST00000487997	MAP3K13	O43283	966 aa		13.46	□□□□□ -0.25
PTBP3-208	ENST00000487997	SRPK2	P78362	688 aa	Known RBP	13.46	□□□□□ -0.25
PTBP3-208	ENST00000487997	DISP3	Q9P2K9	1392 aa		13.45	□□□□□ -0.26
PTBP3-208	ENST00000487997	PSME1	Q06323	249 aa		13.45	□□□□□ -0.26
PTBP3-208	ENST00000487997	SOS2	Q07890	1332 aa	Predicted RBP	13.44	□□□□□ -0.26
PTBP3-208	ENST00000487997	SPATA31A6	Q5VVP1	1343 aa		13.44	□□□□□ -0.26
PTBP3-208	ENST00000487997	EVC2	Q86UK5	1308 aa		13.44	□□□□□ -0.26
PTBP3-208	ENST00000487997	PELP1	Q8IZL8	1130 aa	Known RBP	13.44	□□□□□ -0.26
PTBP3-208	ENST00000487997	PMFBP1	Q8TBY8	1022 aa		13.44	□□□□□ -0.26
PTBP3-208	ENST00000487997	NUDT16	Q96DE0	195 aa	Known RBP	13.44	□□□□□ -0.26
PTBP3-208	ENST00000487997	TOPAZ1	Q8N9V7	1692 aa		13.44	□□□□□ -0.26
PTBP3-208	ENST00000487997	XPC	Q01831	940 aa	Predicted RBP	13.43	□□□□□ -0.26
PTBP3-208	ENST00000487997	KRT28	Q7Z3Y7	464 aa		13.43	□□□□□ -0.26
PTBP3-208	ENST00000487997	NGDN	Q8NEJ9	315 aa	Known RBP	13.43	□□□□□ -0.26
PTBP3-208	ENST00000487997	PXDN	Q92626	1479 aa		13.42	□□□□□ -0.26
PTBP3-208	ENST00000487997	MEX3C	Q5U5Q3	659 aa	Known RBP	13.42	□□□□□ -0.26
PTBP3-208	ENST00000487997	TRPC6	Q9Y210	931 aa		13.42	□□□□□ -0.26
PTBP3-208	ENST00000487997	ATP7B	P35670	1465 aa		13.42	□□□□□ -0.26
PTBP3-208	ENST00000487997	PRR36	Q9H6K5	1346 aa		13.41	□□□□□ -0.26
PTBP3-208	ENST00000487997	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.41	□□□□□ -0.26
PTBP3-208	ENST00000487997	NUTM2E	B1AL46	878 aa	Predicted RBP	13.41	□□□□□ -0.26
PTBP3-208	ENST00000487997	ASTL	Q6HA08	431 aa	Predicted RBP	13.41	□□□□□ -0.26
PTBP3-208	ENST00000487997	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.41	□□□□□ -0.26
PTBP3-208	ENST00000487997	FAM212A	Q96EL1	285 aa		13.41	□□□□□ -0.26
PTBP3-208	ENST00000487997	CABP2	Q9NPB3	220 aa		13.41	□□□□□ -0.26
PTBP3-208	ENST00000487997	ATMIN	O43313	823 aa	Predicted RBP	13.4	□□□□□ -0.26
PTBP3-208	ENST00000487997	SLC24A1	O60721	1099 aa		13.4	□□□□□ -0.26
PTBP3-208	ENST00000487997	PNPLA6	Q8IY17	1366 aa		13.4	□□□□□ -0.26
PTBP3-208	ENST00000487997	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.39	□□□□□ -0.27
PTBP3-208	ENST00000487997	MARF1	Q9Y4F3	1742 aa	Known RBP	13.39	□□□□□ -0.27
PTBP3-208	ENST00000487997	LMOD2	Q6P5Q4	547 aa		13.39	□□□□□ -0.27
PTBP3-208	ENST00000487997	SBNO2	Q9Y2G9	1366 aa		13.39	□□□□□ -0.27
PTBP3-208	ENST00000487997	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.39	□□□□□ -0.27
PTBP3-208	ENST00000487997	PPIP5K1	Q6PFW1	1433 aa		13.39	□□□□□ -0.27
PTBP3-208	ENST00000487997	SPATA31A3	Q5VYP0	1347 aa		13.38	□□□□□ -0.27
PTBP3-208	ENST00000487997	USP47	Q96K76	1375 aa		13.37	□□□□□ -0.27
PTBP3-208	ENST00000487997	ST20-MTHFS	A0A0A6YYL1	179 aa		13.37	□□□□□ -0.27
PTBP3-208	ENST00000487997	HAP1	P54257	671 aa	Predicted RBP	13.37	□□□□□ -0.27
PTBP3-208	ENST00000487997	TNS3	Q68CZ2	1445 aa		13.37	□□□□□ -0.27
PTBP3-208	ENST00000487997	ACE	P12821	1306 aa		13.37	□□□□□ -0.27
PTBP3-208	ENST00000487997	SBNO1	A3KN83	1393 aa		13.36	□□□□□ -0.27
PTBP3-208	ENST00000487997	AKAP12	Q02952	1782 aa		13.36	□□□□□ -0.27
PTBP3-208	ENST00000487997	PLEKHG3	A1L390	1219 aa		13.36	□□□□□ -0.27
PTBP3-208	ENST00000487997	KLHL34	Q8N239	644 aa		13.36	□□□□□ -0.27
PTBP3-208	ENST00000487997	ALS2	Q96Q42	1657 aa		13.36	□□□□□ -0.27
PTBP3-208	ENST00000487997	ARHGEF10	O15013	1369 aa		13.35	□□□□□ -0.27
PTBP3-208	ENST00000487997	ATAD2	Q6PL18	1390 aa		13.35	□□□□□ -0.27
PTBP3-208	ENST00000487997	CABP1	Q9NZU7	370 aa		13.35	□□□□□ -0.27
PTBP3-208	ENST00000487997	LRP6	O75581	1613 aa		13.35	□□□□□ -0.27
PTBP3-208	ENST00000487997	POLR3A	O14802	1390 aa	Predicted RBP	13.34	□□□□□ -0.27
PTBP3-208	ENST00000487997	ADAMTS2	O95450	1211 aa		13.34	□□□□□ -0.27
PTBP3-208	ENST00000487997	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.34	□□□□□ -0.27
PTBP3-208	ENST00000487997	ABCA3	Q99758	1704 aa		13.33	□□□□□ -0.27
PTBP3-208	ENST00000487997	ATN1	P54259	1190 aa	Predicted RBP	13.33	□□□□□ -0.28
PTBP3-208	ENST00000487997	TMF1	P82094	1093 aa		13.33	□□□□□ -0.28
PTBP3-208	ENST00000487997	DCAF8	Q5TAQ9	597 aa		13.33	□□□□□ -0.28
PTBP3-208	ENST00000487997	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.32	□□□□□ -0.28
PTBP3-208	ENST00000487997	TMC1	Q8TDI8	760 aa		13.32	□□□□□ -0.28
PTBP3-208	ENST00000487997	C8orf37	Q96NL8	207 aa		13.32	□□□□□ -0.28
PTBP3-208	ENST00000487997	PCDHB13	Q9Y5F0	798 aa		13.32	□□□□□ -0.28
PTBP3-208	ENST00000487997	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.31	□□□□□ -0.28	3e-6	■■■□□ 14.7
PTBP3-208	ENST00000487997	CDCA8	Q53HL2	280 aa		13.31	□□□□□ -0.28
PTBP3-208	ENST00000487997	NGLY1	Q96IV0	654 aa		13.31	□□□□□ -0.28
PTBP3-208	ENST00000487997	PUS7	Q96PZ0	661 aa	Known RBP	13.31	□□□□□ -0.28
PTBP3-208	ENST00000487997	TESK2	Q96S53	571 aa		13.31	□□□□□ -0.28
PTBP3-208	ENST00000487997	MON2	Q7Z3U7	1717 aa		13.3	□□□□□ -0.28
PTBP3-208	ENST00000487997	POTEB2	H3BUK9	544 aa		13.3	□□□□□ -0.28
PTBP3-208	ENST00000487997	ZNF772	Q68DY9	489 aa	Predicted RBP	13.3	□□□□□ -0.28
PTBP3-208	ENST00000487997	SGIP1	Q9BQI5	828 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms