RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 CUX2O14529 1486 aa20.89■□□□□ 0.93
TRAK1-209ENST00000487159 CCAR1Q8IX12 1150 aaKnown RBP20.89■□□□□ 0.93
TRAK1-209ENST00000487159 ZNF396Q96N95 335 aaPredicted RBP20.89■□□□□ 0.93
TRAK1-209ENST00000487159 ERC2O15083 957 aa20.88■□□□□ 0.93
TRAK1-209ENST00000487159 CCDC43Q96MW1 224 aaKnown RBP20.88■□□□□ 0.93
TRAK1-209ENST00000487159 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
TRAK1-209ENST00000487159 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
TRAK1-209ENST00000487159 RALYLQ86SE5 291 aaKnown RBP20.88■□□□□ 0.93
TRAK1-209ENST00000487159 BRMS1Q9HCU9 246 aa20.88■□□□□ 0.93
TRAK1-209ENST00000487159 AMOTL1Q8IY63 956 aa20.87■□□□□ 0.93
TRAK1-209ENST00000487159 G3V3G9 751 aa20.87■□□□□ 0.93
TRAK1-209ENST00000487159 DCAF8Q5TAQ9 597 aa20.87■□□□□ 0.93
TRAK1-209ENST00000487159 KIF18AQ8NI77 898 aa20.87■□□□□ 0.93
TRAK1-209ENST00000487159 PANK3Q9H999 370 aa20.87■□□□□ 0.93
TRAK1-209ENST00000487159 DYNC1I1O14576 645 aa20.86■□□□□ 0.93
TRAK1-209ENST00000487159 MAP9Q49MG5 647 aa20.86■□□□□ 0.93
TRAK1-209ENST00000487159 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
TRAK1-209ENST00000487159 STK38Q15208 465 aa20.86■□□□□ 0.93
TRAK1-209ENST00000487159 C9orf78Q9NZ63 289 aaPredicted RBP20.86■□□□□ 0.93
TRAK1-209ENST00000487159 CIZ1Q9ULV3 898 aaPredicted RBP20.86■□□□□ 0.93
TRAK1-209ENST00000487159 WDR33Q9C0J8 1336 aaKnown RBP20.85■□□□□ 0.93
TRAK1-209ENST00000487159 SPDYE4A6NLX3 237 aa20.85■□□□□ 0.93
TRAK1-209ENST00000487159 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
TRAK1-209ENST00000487159 DACH1Q9UI36 760 aa20.85■□□□□ 0.93
TRAK1-209ENST00000487159 XBP1P17861 261 aa20.85■□□□□ 0.93
TRAK1-209ENST00000487159 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
TRAK1-209ENST00000487159 CARMIL2Q6F5E8 1435 aa20.84■□□□□ 0.93
TRAK1-209ENST00000487159 K7ELQ4 463 aaPredicted RBP20.84■□□□□ 0.93
TRAK1-209ENST00000487159 GBP2P32456 591 aaPredicted RBP20.84■□□□□ 0.93
TRAK1-209ENST00000487159 TXLNAP40222 546 aa20.84■□□□□ 0.93
TRAK1-209ENST00000487159 SYCP1Q15431 976 aa20.83■□□□□ 0.93
TRAK1-209ENST00000487159 ARHGAP35Q9NRY4 1499 aa20.83■□□□□ 0.93
TRAK1-209ENST00000487159 ARHGAP29Q52LW3 1261 aa20.83■□□□□ 0.92
TRAK1-209ENST00000487159 SPATA24Q86W54 205 aa20.83■□□□□ 0.92
TRAK1-209ENST00000487159 CCDC148Q8NFR7 591 aa20.83■□□□□ 0.92
TRAK1-209ENST00000487159 CEBPZQ03701 1054 aaKnown RBP20.83■□□□□ 0.92
TRAK1-209ENST00000487159 HSP90AB4PQ58FF6 505 aa20.83■□□□□ 0.92
TRAK1-209ENST00000487159 PANK1Q8TE04 598 aa20.83■□□□□ 0.92
TRAK1-209ENST00000487159 CLGNO14967 610 aa20.82■□□□□ 0.92
TRAK1-209ENST00000487159 G3BP1Q13283 466 aaKnown RBP eCLIP20.82■□□□□ 0.92
TRAK1-209ENST00000487159 CEP57L1Q8IYX8 460 aa20.82■□□□□ 0.92
TRAK1-209ENST00000487159 RAD21O60216 631 aa20.82■□□□□ 0.92
TRAK1-209ENST00000487159 JAKMIP3Q5VZ66 844 aa20.82■□□□□ 0.92
TRAK1-209ENST00000487159 LMAN1P49257 510 aa20.82■□□□□ 0.92
TRAK1-209ENST00000487159 KRT85P78386 507 aa20.82■□□□□ 0.92
TRAK1-209ENST00000487159 TDRD9Q8NDG6 1382 aaKnown RBP20.81■□□□□ 0.92
TRAK1-209ENST00000487159 PLCD3Q8N3E9 789 aa20.81■□□□□ 0.92
TRAK1-209ENST00000487159 SMARCC1Q92922 1105 aaPredicted RBP20.81■□□□□ 0.92
TRAK1-209ENST00000487159 JMYQ8N9B5 988 aa20.81■□□□□ 0.92
TRAK1-209ENST00000487159 MCM3P25205 808 aa20.8■□□□□ 0.92
TRAK1-209ENST00000487159 CEP63Q96MT8 703 aa20.8■□□□□ 0.92
TRAK1-209ENST00000487159 FMN1Q68DA7 1419 aa20.79■□□□□ 0.92
TRAK1-209ENST00000487159 URI1O94763 535 aaPredicted RBP20.79■□□□□ 0.92
TRAK1-209ENST00000487159 TDO2P48775 406 aa20.79■□□□□ 0.92
TRAK1-209ENST00000487159 BMS1Q14692 1282 aaKnown RBP20.79■□□□□ 0.92
TRAK1-209ENST00000487159 EFCAB2Q5VUJ9 269 aa20.79■□□□□ 0.92
TRAK1-209ENST00000487159 NUP62CLQ9H1M0 184 aa20.79■□□□□ 0.92
TRAK1-209ENST00000487159 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
TRAK1-209ENST00000487159 EPB41L2O43491 1005 aaKnown RBP20.79■□□□□ 0.92
TRAK1-209ENST00000487159 CCDC91Q7Z6B0 441 aa20.79■□□□□ 0.92
TRAK1-209ENST00000487159 SYCE3A1L190 88 aa20.79■□□□□ 0.92
TRAK1-209ENST00000487159 GTF2E1P29083 439 aaPredicted RBP20.79■□□□□ 0.92
TRAK1-209ENST00000487159 LUZP1Q86V48 1076 aa20.79■□□□□ 0.92
TRAK1-209ENST00000487159 ATP2B1P20020 1258 aa20.78■□□□□ 0.92
TRAK1-209ENST00000487159 UPF3BQ9BZI7 483 aaKnown RBP20.78■□□□□ 0.92
TRAK1-209ENST00000487159 ST20-MTHFSA0A0A6YYL1 179 aa20.78■□□□□ 0.92
TRAK1-209ENST00000487159 PDZRN3Q9UPQ7 1066 aa20.78■□□□□ 0.92
TRAK1-209ENST00000487159 ZSCAN12O43309 604 aa20.77■□□□□ 0.92
TRAK1-209ENST00000487159 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.92
TRAK1-209ENST00000487159 AMPHP49418 695 aa20.77■□□□□ 0.92
TRAK1-209ENST00000487159 ME1P48163 572 aa20.77■□□□□ 0.92
TRAK1-209ENST00000487159 EID1Q9Y6B2 187 aa20.77■□□□□ 0.92
TRAK1-209ENST00000487159 SMC1AQ14683 1233 aaKnown RBP20.77■□□□□ 0.91
TRAK1-209ENST00000487159 CCDC175P0C221 793 aa20.76■□□□□ 0.91
TRAK1-209ENST00000487159 NUP155O75694 1391 aa20.76■□□□□ 0.91
TRAK1-209ENST00000487159 SFPQP23246 707 aaKnown RBP eCLIP20.76■□□□□ 0.91
TRAK1-209ENST00000487159 SSR1P43307 286 aaKnown RBP20.76■□□□□ 0.91
TRAK1-209ENST00000487159 KRT222Q8N1A0 295 aa20.76■□□□□ 0.91
TRAK1-209ENST00000487159 CNTROBQ8N137 903 aa20.76■□□□□ 0.91
TRAK1-209ENST00000487159 TAF4BQ92750 862 aa20.75■□□□□ 0.91
TRAK1-209ENST00000487159 GTPBP4Q9BZE4 634 aaKnown RBP20.75■□□□□ 0.91
TRAK1-209ENST00000487159 MCM5P33992 734 aa20.75■□□□□ 0.91
TRAK1-209ENST00000487159 MSH5O43196 834 aa20.75■□□□□ 0.91
TRAK1-209ENST00000487159 KIAA1328Q86T90 577 aa20.75■□□□□ 0.91
TRAK1-209ENST00000487159 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
TRAK1-209ENST00000487159 KANK4Q5T7N3 995 aaPredicted RBP20.75■□□□□ 0.91
TRAK1-209ENST00000487159 CCDC113Q9H0I3 377 aa20.75■□□□□ 0.91
TRAK1-209ENST00000487159 ZFP91Q96JP5 570 aaPredicted RBP20.74■□□□□ 0.91
TRAK1-209ENST00000487159 SMTNL1A8MU46 457 aa20.74■□□□□ 0.91
TRAK1-209ENST00000487159 CASQ1P31415 396 aa20.74■□□□□ 0.91
TRAK1-209ENST00000487159 STIM1Q13586 685 aa20.74■□□□□ 0.91
TRAK1-209ENST00000487159 CTR9Q6PD62 1173 aa20.74■□□□□ 0.91
TRAK1-209ENST00000487159 PRIMPOLQ96LW4 560 aa20.74■□□□□ 0.91
TRAK1-209ENST00000487159 PDIA4P13667 645 aaKnown RBP20.73■□□□□ 0.91
TRAK1-209ENST00000487159 FKBP5Q13451 457 aaPredicted RBP20.73■□□□□ 0.91
TRAK1-209ENST00000487159 IVLP07476 585 aa20.73■□□□□ 0.91
TRAK1-209ENST00000487159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.72■□□□□ 0.916e-7■■■□□ 15.3
TRAK1-209ENST00000487159 CTDP1Q9Y5B0 961 aaPredicted RBP20.72■□□□□ 0.91
TRAK1-209ENST00000487159 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
TRAK1-209ENST00000487159 KIF3BO15066 747 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms