RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 PKD2Q13563 968 aa8.27□□□□□ -1.09
COPS3-208ENST00000486032 NBPF3Q9H094 633 aa8.27□□□□□ -1.09
COPS3-208ENST00000486032 BCL2L12Q9HB09 334 aa8.27□□□□□ -1.09
COPS3-208ENST00000486032 TET3O43151 1660 aa8.27□□□□□ -1.09
COPS3-208ENST00000486032 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
COPS3-208ENST00000486032 A2ML1A8K2U0 1454 aa8.26□□□□□ -1.09
COPS3-208ENST00000486032 UBR1Q8IWV7 1749 aa8.26□□□□□ -1.09
COPS3-208ENST00000486032 ZBED2Q9BTP6 218 aa8.26□□□□□ -1.09
COPS3-208ENST00000486032 MYO5BQ9ULV0 1848 aa8.25□□□□□ -1.09
COPS3-208ENST00000486032 HRCP23327 699 aa8.25□□□□□ -1.09
COPS3-208ENST00000486032 PTPREP23469 700 aa8.25□□□□□ -1.09
COPS3-208ENST00000486032 ARHGAP31Q2M1Z3 1444 aa8.25□□□□□ -1.09
COPS3-208ENST00000486032 SETD1BQ9UPS6 1966 aaKnown RBP8.24□□□□□ -1.09
COPS3-208ENST00000486032 NOS1P29475 1434 aa8.24□□□□□ -1.09
COPS3-208ENST00000486032 CHGAP10645 457 aaKnown RBP8.24□□□□□ -1.09
COPS3-208ENST00000486032 BCL11BQ9C0K0 894 aaPredicted RBP8.24□□□□□ -1.09
COPS3-208ENST00000486032 ACIN1Q9UKV3 1341 aaKnown RBP8.24□□□□□ -1.09
COPS3-208ENST00000486032 POLR1AO95602 1720 aaPredicted RBP8.23□□□□□ -1.09
COPS3-208ENST00000486032 NYAP1Q6ZVC0 841 aa8.23□□□□□ -1.09
COPS3-208ENST00000486032 ZNF454Q8N9F8 522 aa8.23□□□□□ -1.09
COPS3-208ENST00000486032 ANKK1Q8NFD2 765 aa8.22□□□□□ -1.09
COPS3-208ENST00000486032 CCER1Q8TC90 406 aaPredicted RBP8.22□□□□□ -1.09
COPS3-208ENST00000486032 STRCP1A6NGW2 1772 aa8.22□□□□□ -1.09
COPS3-208ENST00000486032 DHX57Q6P158 1386 aaKnown RBP8.22□□□□□ -1.09
COPS3-208ENST00000486032 CLTCL1P53675 1640 aa8.21□□□□□ -1.09
COPS3-208ENST00000486032 LTBP4Q8N2S1 1624 aa8.21□□□□□ -1.09
COPS3-208ENST00000486032 PLA2R1Q13018 1463 aa8.21□□□□□ -1.09
COPS3-208ENST00000486032 NLRP1Q9C000 1473 aa8.21□□□□□ -1.09
COPS3-208ENST00000486032 ADGRB3O60242 1522 aa8.21□□□□□ -1.1
COPS3-208ENST00000486032 NEUROD1Q13562 356 aa8.21□□□□□ -1.1
COPS3-208ENST00000486032 PLPP6Q8IY26 295 aa8.21□□□□□ -1.1
COPS3-208ENST00000486032 STK24Q9Y6E0 443 aa8.21□□□□□ -1.1
COPS3-208ENST00000486032 SPHKAPQ2M3C7 1700 aa8.2□□□□□ -1.1
COPS3-208ENST00000486032 FOXK1P85037 733 aa8.2□□□□□ -1.1
COPS3-208ENST00000486032 IDI1Q13907 227 aa8.2□□□□□ -1.1
COPS3-208ENST00000486032 TAOK2Q9UL54 1235 aa8.2□□□□□ -1.1
COPS3-208ENST00000486032 TMEM131LA2VDJ0 1609 aa8.2□□□□□ -1.1
COPS3-208ENST00000486032 ARHGAP23Q9P227 1491 aa8.19□□□□□ -1.1
COPS3-208ENST00000486032 LTKP29376 864 aa8.19□□□□□ -1.1
COPS3-208ENST00000486032 SIN3AQ96ST3 1273 aa8.19□□□□□ -1.1
COPS3-208ENST00000486032 ZNF335Q9H4Z2 1342 aaPredicted RBP8.19□□□□□ -1.1
COPS3-208ENST00000486032 PTPRTO14522 1441 aa8.18□□□□□ -1.1
COPS3-208ENST00000486032 RPRD2Q5VT52 1461 aaKnown RBP8.18□□□□□ -1.1
COPS3-208ENST00000486032 SLIT1O75093 1534 aa8.18□□□□□ -1.1
COPS3-208ENST00000486032 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
COPS3-208ENST00000486032 RGL3Q3MIN7 710 aa8.17□□□□□ -1.1
COPS3-208ENST00000486032 ZNF326Q5BKZ1 582 aaKnown RBP8.17□□□□□ -1.1
COPS3-208ENST00000486032 NUTM2DQ5VT03 806 aaPredicted RBP8.17□□□□□ -1.1
COPS3-208ENST00000486032 CCDC144AA2RUR9 1427 aa8.17□□□□□ -1.1
COPS3-208ENST00000486032 NPHP4O75161 1426 aaPredicted RBP8.16□□□□□ -1.1
COPS3-208ENST00000486032 TRPM2O94759 1503 aa8.16□□□□□ -1.1
COPS3-208ENST00000486032 ZFYVE9O95405 1425 aa8.16□□□□□ -1.1
COPS3-208ENST00000486032 BCAMP50895 628 aa8.16□□□□□ -1.1
COPS3-208ENST00000486032 ANKRD30BQ9BXX2 1392 aa8.16□□□□□ -1.1
COPS3-208ENST00000486032 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
COPS3-208ENST00000486032 SLC52A1Q9NWF4 448 aa8.16□□□□□ -1.1
COPS3-208ENST00000486032 MED14O60244 1454 aa8.15□□□□□ -1.1
COPS3-208ENST00000486032 SCAF11Q99590 1463 aaKnown RBP8.15□□□□□ -1.1
COPS3-208ENST00000486032 TMEM2Q9UHN6 1383 aa8.15□□□□□ -1.1
COPS3-208ENST00000486032 KDM5AP29375 1690 aaKnown RBP8.14□□□□□ -1.11
COPS3-208ENST00000486032 ALKQ9UM73 1620 aa8.14□□□□□ -1.11
COPS3-208ENST00000486032 NRXN3Q9Y4C0 1643 aa8.14□□□□□ -1.11
COPS3-208ENST00000486032 SOWAHBA6NEL2 793 aa8.14□□□□□ -1.11
COPS3-208ENST00000486032 KDM2AQ9Y2K7 1162 aa8.14□□□□□ -1.11
COPS3-208ENST00000486032 RIMS2Q9UQ26 1411 aa8.13□□□□□ -1.11
COPS3-208ENST00000486032 KIF1BO60333 1816 aa8.13□□□□□ -1.11
COPS3-208ENST00000486032 XIRP1Q702N8 1843 aaKnown RBP8.13□□□□□ -1.11
COPS3-208ENST00000486032 FOSBP53539 338 aa8.13□□□□□ -1.11
COPS3-208ENST00000486032 BCANQ96GW7 911 aa8.13□□□□□ -1.11
COPS3-208ENST00000486032 NEXMIFQ5QGS0 1516 aa8.13□□□□□ -1.11
COPS3-208ENST00000486032 PPP1R15AO75807 674 aaPredicted RBP8.12□□□□□ -1.11
COPS3-208ENST00000486032 TXNDC2Q86VQ3 553 aa8.12□□□□□ -1.11
COPS3-208ENST00000486032 THEMISQ8N1K5 641 aaPredicted RBP8.12□□□□□ -1.11
COPS3-208ENST00000486032 GPHNQ9NQX3 736 aaPredicted RBP8.12□□□□□ -1.11
COPS3-208ENST00000486032 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
COPS3-208ENST00000486032 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
COPS3-208ENST00000486032 CERKQ8TCT0 537 aa8.11□□□□□ -1.11
COPS3-208ENST00000486032 RBM33Q96EV2 1170 aaKnown RBP8.11□□□□□ -1.11
COPS3-208ENST00000486032 SLC26A8Q96RN1 970 aa8.11□□□□□ -1.11
COPS3-208ENST00000486032 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
COPS3-208ENST00000486032 ADAMTS13Q76LX8 1427 aa8.11□□□□□ -1.11
COPS3-208ENST00000486032 TONSLQ96HA7 1378 aa8.1□□□□□ -1.11
COPS3-208ENST00000486032 SETD1AO15047 1707 aaKnown RBP8.1□□□□□ -1.11
COPS3-208ENST00000486032 STK25O00506 426 aa8.1□□□□□ -1.11
COPS3-208ENST00000486032 DSG2Q14126 1118 aa8.1□□□□□ -1.11
COPS3-208ENST00000486032 ANKLE2Q86XL3 938 aa8.1□□□□□ -1.11
COPS3-208ENST00000486032 DCAF11Q8TEB1 546 aa8.1□□□□□ -1.11
COPS3-208ENST00000486032 EID1Q9Y6B2 187 aa8.1□□□□□ -1.11
COPS3-208ENST00000486032 IFT172Q9UG01 1749 aa8.09□□□□□ -1.11
COPS3-208ENST00000486032 LAPTM4BQ86VI4 370 aa8.09□□□□□ -1.11
COPS3-208ENST00000486032 PDZRN3Q9UPQ7 1066 aa8.09□□□□□ -1.11
COPS3-208ENST00000486032 PTPRUQ92729 1446 aa8.09□□□□□ -1.11
COPS3-208ENST00000486032 PPLO60437 1756 aa8.09□□□□□ -1.11
COPS3-208ENST00000486032 NWD1Q149M9 1564 aa8.09□□□□□ -1.11
COPS3-208ENST00000486032 LRRC7Q96NW7 1537 aa8.08□□□□□ -1.12
COPS3-208ENST00000486032 PPP1R37O75864 691 aa8.08□□□□□ -1.12
COPS3-208ENST00000486032 HDGFP51858 240 aaKnown RBP8.08□□□□□ -1.12
COPS3-208ENST00000486032 OXER1Q8TDS5 423 aa8.08□□□□□ -1.12
COPS3-208ENST00000486032 L3MBTL2Q969R5 705 aa8.08□□□□□ -1.12
COPS3-208ENST00000486032 SPATA31E1Q6ZUB1 1445 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms