RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
SNRNP200-203ENST00000480242 PLEKHG2Q9H7P9 1386 aa11.09□□□□□ -0.63
SNRNP200-203ENST00000480242 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
SNRNP200-203ENST00000480242 BRD4O60885 1362 aaPredicted RBP11.09□□□□□ -0.63
SNRNP200-203ENST00000480242 KIF3BO15066 747 aa11.09□□□□□ -0.63
SNRNP200-203ENST00000480242 AHDC1Q5TGY3 1603 aaPredicted RBP11.08□□□□□ -0.64
SNRNP200-203ENST00000480242 MS4A1P11836 297 aa11.08□□□□□ -0.64
SNRNP200-203ENST00000480242 NUTM2DQ5VT03 806 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 PEAK1Q9H792 1746 aa11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 RRP1P56182 461 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 RRAGDQ9NQL2 400 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 SIPA1L3O60292 1781 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 VIRMAQ69YN4 1812 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-203ENST00000480242 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-203ENST00000480242 HSP90AA2PQ14568 343 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-203ENST00000480242 EIF3AQ14152 1382 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-203ENST00000480242 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
SNRNP200-203ENST00000480242 TMC1Q8TDI8 760 aa11.04□□□□□ -0.64
SNRNP200-203ENST00000480242 NFAT5O94916 1531 aa11.04□□□□□ -0.64
SNRNP200-203ENST00000480242 KIF7Q2M1P5 1343 aa11.04□□□□□ -0.64
SNRNP200-203ENST00000480242 SHANK3Q9BYB0 1731 aa11.04□□□□□ -0.64
SNRNP200-203ENST00000480242 POLR3AO14802 1390 aaPredicted RBP11.03□□□□□ -0.64
SNRNP200-203ENST00000480242 RCAN3Q9UKA8 241 aa11.03□□□□□ -0.64
SNRNP200-203ENST00000480242 PKD1L3Q7Z443 1732 aa11.03□□□□□ -0.64
SNRNP200-203ENST00000480242 PLIN1O60240 522 aa11.02□□□□□ -0.64
SNRNP200-203ENST00000480242 DISP3Q9P2K9 1392 aa11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 LTN1O94822 1766 aa11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 HSP90AA1P07900 732 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 NSD2O96028 1365 aa11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 BLMP54132 1417 aaPredicted RBP11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 NRAPQ86VF7 1730 aa11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 IDI1Q13907 227 aa11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 POGKQ9P215 609 aa11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
SNRNP200-203ENST00000480242 PAPPAQ13219 1627 aa11.01□□□□□ -0.65
SNRNP200-203ENST00000480242 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-203ENST00000480242 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
SNRNP200-203ENST00000480242 ZNF831Q5JPB2 1677 aa11□□□□□ -0.65
SNRNP200-203ENST00000480242 SAFB2Q14151 953 aaKnown RBP eCLIP10.99□□□□□ -0.65
SNRNP200-203ENST00000480242 PER1O15534 1290 aaPredicted RBP10.99□□□□□ -0.65
SNRNP200-203ENST00000480242 ADGRL3Q9HAR2 1447 aa10.98□□□□□ -0.65
SNRNP200-203ENST00000480242 PNISRQ8TF01 805 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-203ENST00000480242 NPHP4O75161 1426 aaPredicted RBP10.98□□□□□ -0.65
SNRNP200-203ENST00000480242 KDM4FA0A1W2PPD8 638 aa10.98□□□□□ -0.65
SNRNP200-203ENST00000480242 NCBP3Q53F19 620 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-203ENST00000480242 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNRNP200-203ENST00000480242 METP08581 1390 aa10.97□□□□□ -0.65
SNRNP200-203ENST00000480242 OVOS2A0A0J9YW53 1432 aa10.96□□□□□ -0.65
SNRNP200-203ENST00000480242 OVOS2Q6IE36 1432 aa10.96□□□□□ -0.65
SNRNP200-203ENST00000480242 CRBNQ96SW2 442 aa10.96□□□□□ -0.65
SNRNP200-203ENST00000480242 RRP9O43818 475 aaKnown RBP10.96□□□□□ -0.66
SNRNP200-203ENST00000480242 ST20-MTHFSA0A0A6YYL1 179 aa10.96□□□□□ -0.66
SNRNP200-203ENST00000480242 USP31Q70CQ4 1352 aa10.95□□□□□ -0.66
SNRNP200-203ENST00000480242 RGS3P49796 1198 aa10.95□□□□□ -0.66
SNRNP200-203ENST00000480242 TBX22Q9Y458 520 aa10.95□□□□□ -0.66
SNRNP200-203ENST00000480242 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
SNRNP200-203ENST00000480242 CC2D1BQ5T0F9 858 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-203ENST00000480242 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-203ENST00000480242 PXDNQ92626 1479 aa10.94□□□□□ -0.66
SNRNP200-203ENST00000480242 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
SNRNP200-203ENST00000480242 ANKRD36BQ8N2N9 1353 aa10.94□□□□□ -0.66
SNRNP200-203ENST00000480242 SLKQ9H2G2 1235 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-203ENST00000480242 COL16A1Q07092 1604 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-203ENST00000480242 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
SNRNP200-203ENST00000480242 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
SNRNP200-203ENST00000480242 L1TD1Q5T7N2 865 aaKnown RBP10.93□□□□□ -0.66
SNRNP200-203ENST00000480242 GLI3P10071 1580 aa10.93□□□□□ -0.66
SNRNP200-203ENST00000480242 A0A0U1RQG5 324 aaPredicted RBP10.93□□□□□ -0.66
SNRNP200-203ENST00000480242 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
SNRNP200-203ENST00000480242 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
SNRNP200-203ENST00000480242 FAM161AQ3B820 660 aa10.93□□□□□ -0.66
SNRNP200-203ENST00000480242 NBPF1Q3BBV0 1214 aa10.92□□□□□ -0.66
SNRNP200-203ENST00000480242 ROBO2Q9HCK4 1378 aa10.91□□□□□ -0.66
SNRNP200-203ENST00000480242 GZF1Q9H116 711 aaPredicted RBP10.91□□□□□ -0.66
SNRNP200-203ENST00000480242 STK26Q9P289 416 aa10.91□□□□□ -0.66
SNRNP200-203ENST00000480242 DLG5Q8TDM6 1919 aa10.91□□□□□ -0.66
SNRNP200-203ENST00000480242 RREB1Q92766 1687 aa10.91□□□□□ -0.66
SNRNP200-203ENST00000480242 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.66
SNRNP200-203ENST00000480242 KDM3BQ7LBC6 1761 aa10.9□□□□□ -0.66
SNRNP200-203ENST00000480242 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.67
SNRNP200-203ENST00000480242 C8orf34Q49A92 452 aa10.9□□□□□ -0.67
SNRNP200-203ENST00000480242 PANK2Q9BZ23 570 aa10.9□□□□□ -0.67
SNRNP200-203ENST00000480242 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.67
SNRNP200-203ENST00000480242 C20orf194Q5TEA3 1177 aa10.89□□□□□ -0.67
SNRNP200-203ENST00000480242 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
SNRNP200-203ENST00000480242 PHLPP1O60346 1717 aa10.89□□□□□ -0.67
SNRNP200-203ENST00000480242 ATAD2Q6PL18 1390 aa10.89□□□□□ -0.67
SNRNP200-203ENST00000480242 XRCC6P12956 609 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNRNP200-203ENST00000480242 LRP6O75581 1613 aa10.88□□□□□ -0.67
SNRNP200-203ENST00000480242 CLCN1P35523 988 aa10.88□□□□□ -0.67
SNRNP200-203ENST00000480242 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-203ENST00000480242 GOLGA6L3A6NEY3 463 aa10.87□□□□□ -0.67
SNRNP200-203ENST00000480242 LTKP29376 864 aa10.84□□□□□ -0.67
SNRNP200-203ENST00000480242 CENPQQ7L2Z9 268 aaPredicted RBP10.84□□□□□ -0.67
SNRNP200-203ENST00000480242 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
SNRNP200-203ENST00000480242 TRAK1Q9UPV9 953 aa10.84□□□□□ -0.67
SNRNP200-203ENST00000480242 PDE3BQ13370 1112 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms