RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 HECW2Q9P2P5 1572 aa11.03□□□□□ -0.64
PKP4-210ENST00000480171 TBC1D32Q96NH3 1257 aa11.03□□□□□ -0.64
PKP4-210ENST00000480171 TNNQ9UQP3 1299 aa11.03□□□□□ -0.64
PKP4-210ENST00000480171 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
PKP4-210ENST00000480171 ABCC3O15438 1527 aa11.02□□□□□ -0.65
PKP4-210ENST00000480171 ADGRB2O60241 1585 aa11.02□□□□□ -0.65
PKP4-210ENST00000480171 SMC4Q9NTJ3 1288 aa11.02□□□□□ -0.65
PKP4-210ENST00000480171 CD109Q6YHK3 1445 aa11.01□□□□□ -0.65
PKP4-210ENST00000480171 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
PKP4-210ENST00000480171 SLKQ9H2G2 1235 aaPredicted RBP11.01□□□□□ -0.65
PKP4-210ENST00000480171 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
PKP4-210ENST00000480171 TULP4Q9NRJ4 1543 aa11.01□□□□□ -0.65
PKP4-210ENST00000480171 DDX19BQ9UMR2 479 aa11.01□□□□□ -0.65
PKP4-210ENST00000480171 FRMPD1Q5SYB0 1578 aa11.01□□□□□ -0.65
PKP4-210ENST00000480171 ABCC11Q96J66 1382 aa11.01□□□□□ -0.65
PKP4-210ENST00000480171 U2SURPO15042 1029 aaKnown RBP11.01□□□□□ -0.65
PKP4-210ENST00000480171 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
PKP4-210ENST00000480171 CABP2Q9NPB3 220 aa11.01□□□□□ -0.65
PKP4-210ENST00000480171 CAMSAP1Q5T5Y3 1602 aa11.01□□□□□ -0.65
PKP4-210ENST00000480171 IL16Q14005 1332 aa11□□□□□ -0.65
PKP4-210ENST00000480171 TMPOP42166 694 aaKnown RBP10.99□□□□□ -0.65
PKP4-210ENST00000480171 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
PKP4-210ENST00000480171 EXOSC9Q06265 439 aaKnown RBP10.99□□□□□ -0.65
PKP4-210ENST00000480171 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
PKP4-210ENST00000480171 TERF2IPQ9NYB0 399 aa10.99□□□□□ -0.65
PKP4-210ENST00000480171 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
PKP4-210ENST00000480171 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
PKP4-210ENST00000480171 IPO8O15397 1037 aaKnown RBP10.99□□□□□ -0.65
PKP4-210ENST00000480171 L1TD1Q5T7N2 865 aaKnown RBP10.99□□□□□ -0.65
PKP4-210ENST00000480171 NUTM2DQ5VT03 806 aaPredicted RBP10.99□□□□□ -0.65
PKP4-210ENST00000480171 TSR2Q969E8 191 aaKnown RBP10.99□□□□□ -0.65
PKP4-210ENST00000480171 TBC1D2Q9BYX2 928 aa10.99□□□□□ -0.65
PKP4-210ENST00000480171 ATAD2Q6PL18 1390 aa10.98□□□□□ -0.65
PKP4-210ENST00000480171 ATF7IPQ6VMQ6 1270 aa10.98□□□□□ -0.65
PKP4-210ENST00000480171 ITPRIPQ8IWB1 547 aa10.98□□□□□ -0.65
PKP4-210ENST00000480171 ANTXR1Q9H6X2 564 aa10.98□□□□□ -0.65
PKP4-210ENST00000480171 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
PKP4-210ENST00000480171 A0A0U1RQG5 324 aaPredicted RBP10.98□□□□□ -0.65
PKP4-210ENST00000480171 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
PKP4-210ENST00000480171 A0A1W2PP64 1363 aa10.97□□□□□ -0.65
PKP4-210ENST00000480171 ZFYVE9O95405 1425 aa10.97□□□□□ -0.65
PKP4-210ENST00000480171 SAFB2Q14151 953 aaKnown RBP eCLIP10.97□□□□□ -0.65
PKP4-210ENST00000480171 C22orf23Q9BZE7 217 aa10.97□□□□□ -0.65
PKP4-210ENST00000480171 KIF16BQ96L93 1317 aa10.97□□□□□ -0.65
PKP4-210ENST00000480171 CYB5RLQ6IPT4 315 aa10.97□□□□□ -0.65
PKP4-210ENST00000480171 SSH1Q8WYL5 1049 aa10.97□□□□□ -0.65
PKP4-210ENST00000480171 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
PKP4-210ENST00000480171 SLC52A1Q9NWF4 448 aa10.97□□□□□ -0.65
PKP4-210ENST00000480171 TRIM27P14373 513 aa10.96□□□□□ -0.65
PKP4-210ENST00000480171 POGKQ9P215 609 aa10.96□□□□□ -0.65
PKP4-210ENST00000480171 STK26Q9P289 416 aa10.96□□□□□ -0.65
PKP4-210ENST00000480171 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
PKP4-210ENST00000480171 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.65
PKP4-210ENST00000480171 HDGFL2Q7Z4V5 671 aaPredicted RBP10.96□□□□□ -0.66
PKP4-210ENST00000480171 MED14O60244 1454 aa10.96□□□□□ -0.66
PKP4-210ENST00000480171 DIAPH1O60610 1272 aaKnown RBP10.95□□□□□ -0.66
PKP4-210ENST00000480171 RIPK4P57078 832 aa10.95□□□□□ -0.66
PKP4-210ENST00000480171 NOB1Q9ULX3 412 aaKnown RBP10.95□□□□□ -0.66
PKP4-210ENST00000480171 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
PKP4-210ENST00000480171 FAM43AQ8N2R8 423 aa10.95□□□□□ -0.66
PKP4-210ENST00000480171 SIGLEC1Q9BZZ2 1709 aa10.95□□□□□ -0.66
PKP4-210ENST00000480171 COL3A1P02461 1466 aaPredicted RBP10.95□□□□□ -0.66
PKP4-210ENST00000480171 IDI1Q13907 227 aa10.94□□□□□ -0.66
PKP4-210ENST00000480171 SMC5Q8IY18 1101 aa10.94□□□□□ -0.66
PKP4-210ENST00000480171 CHMP5Q9NZZ3 219 aa10.94□□□□□ -0.66
PKP4-210ENST00000480171 ANKRD26Q9UPS8 1709 aa10.94□□□□□ -0.66
PKP4-210ENST00000480171 FYB1O15117 783 aa10.94□□□□□ -0.66
PKP4-210ENST00000480171 ALDH1L2Q3SY69 923 aa10.94□□□□□ -0.66
PKP4-210ENST00000480171 CHMP4BQ9H444 224 aaKnown RBP10.94□□□□□ -0.66
PKP4-210ENST00000480171 NEO1Q92859 1461 aa10.94□□□□□ -0.66
PKP4-210ENST00000480171 HSCBQ8IWL3 235 aa10.94□□□□□ -0.66
PKP4-210ENST00000480171 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
PKP4-210ENST00000480171 TMEM57Q8N5G2 664 aa10.93□□□□□ -0.66
PKP4-210ENST00000480171 ZNF428Q96B54 188 aa10.93□□□□□ -0.66
PKP4-210ENST00000480171 MINK1Q8N4C8 1332 aaPredicted RBP10.93□□□□□ -0.66
PKP4-210ENST00000480171 FCHSD2O94868 740 aa10.92□□□□□ -0.66
PKP4-210ENST00000480171 HSP90B1P14625 803 aaKnown RBP10.92□□□□□ -0.66
PKP4-210ENST00000480171 PRAM1Q96QH2 718 aa10.92□□□□□ -0.66
PKP4-210ENST00000480171 ZBTB40Q9NUA8 1239 aa10.92□□□□□ -0.66
PKP4-210ENST00000480171 MCM4P33991 863 aa10.92□□□□□ -0.66
PKP4-210ENST00000480171 ARID3AQ99856 593 aa10.92□□□□□ -0.66
PKP4-210ENST00000480171 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
PKP4-210ENST00000480171 SPRYD3Q8NCJ5 442 aa10.91□□□□□ -0.66
PKP4-210ENST00000480171 PTPRMP28827 1452 aa10.91□□□□□ -0.66
PKP4-210ENST00000480171 DIP2CQ9Y2E4 1556 aa10.91□□□□□ -0.66
PKP4-210ENST00000480171 CLTCQ00610 1675 aaKnown RBP10.91□□□□□ -0.66
PKP4-210ENST00000480171 RAPGEF3O95398 923 aa10.91□□□□□ -0.66
PKP4-210ENST00000480171 YTHDC2Q9H6S0 1430 aaKnown RBP10.91□□□□□ -0.66
PKP4-210ENST00000480171 ADRA2BP18089 450 aa10.9□□□□□ -0.66
PKP4-210ENST00000480171 NUCB1Q02818 461 aa10.9□□□□□ -0.66
PKP4-210ENST00000480171 PNPLA6Q8IY17 1366 aa10.9□□□□□ -0.66
PKP4-210ENST00000480171 GOLGA6L3A6NEY3 463 aa10.9□□□□□ -0.66
PKP4-210ENST00000480171 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
PKP4-210ENST00000480171 CDK19Q9BWU1 502 aa10.89□□□□□ -0.67
PKP4-210ENST00000480171 CD163L1Q9NR16 1453 aa10.89□□□□□ -0.67
PKP4-210ENST00000480171 CHD1LQ86WJ1 897 aa10.88□□□□□ -0.67
PKP4-210ENST00000480171 KIF20BQ96Q89 1820 aa10.88□□□□□ -0.67
PKP4-210ENST00000480171 DDX11L8A8MPP1 907 aa10.88□□□□□ -0.67
PKP4-210ENST00000480171 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
PKP4-210ENST00000480171 GCC1Q96CN9 775 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms