RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.04	□□□□□ -0.48
SH3YL1-222	ENST00000479739	QRICH2	Q9H0J4	1663 aa		12.03	□□□□□ -0.48
SH3YL1-222	ENST00000479739	CARD11	Q9BXL7	1154 aa		12.03	□□□□□ -0.48
SH3YL1-222	ENST00000479739	WASL	O00401	505 aa	Predicted RBP	12.03	□□□□□ -0.48
SH3YL1-222	ENST00000479739	LRRC59	Q96AG4	307 aa	Known RBP	12.03	□□□□□ -0.48
SH3YL1-222	ENST00000479739	NPHP3	Q7Z494	1330 aa		12.03	□□□□□ -0.48
SH3YL1-222	ENST00000479739	LRP6	O75581	1613 aa		12.02	□□□□□ -0.48
SH3YL1-222	ENST00000479739	PAK3	O75914	559 aa	Predicted RBP	12.02	□□□□□ -0.48
SH3YL1-222	ENST00000479739	MS4A1	P11836	297 aa		12.02	□□□□□ -0.48
SH3YL1-222	ENST00000479739	RRP1	P56182	461 aa	Known RBP	12.02	□□□□□ -0.48
SH3YL1-222	ENST00000479739	ATP7B	P35670	1465 aa		12.02	□□□□□ -0.48
SH3YL1-222	ENST00000479739	SPATA31A6	Q5VVP1	1343 aa		12.02	□□□□□ -0.49
SH3YL1-222	ENST00000479739	PRR36	Q9H6K5	1346 aa		12.02	□□□□□ -0.49
SH3YL1-222	ENST00000479739	EIF3A	Q14152	1382 aa	Known RBP	12.02	□□□□□ -0.49
SH3YL1-222	ENST00000479739	PNPLA6	Q8IY17	1366 aa		12.01	□□□□□ -0.49
SH3YL1-222	ENST00000479739	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.01	□□□□□ -0.49
SH3YL1-222	ENST00000479739	ITSN1	Q15811	1721 aa		12.01	□□□□□ -0.49
SH3YL1-222	ENST00000479739	POLR3GL	Q9BT43	218 aa		12.01	□□□□□ -0.49
SH3YL1-222	ENST00000479739	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.01	□□□□□ -0.49
SH3YL1-222	ENST00000479739	TOPAZ1	Q8N9V7	1692 aa		12.01	□□□□□ -0.49
SH3YL1-222	ENST00000479739	FOXO3	O43524	673 aa		12.01	□□□□□ -0.49
SH3YL1-222	ENST00000479739	NLRP13	Q86W25	1043 aa		12	□□□□□ -0.49
SH3YL1-222	ENST00000479739	USP35	Q9P2H5	1018 aa		12	□□□□□ -0.49
SH3YL1-222	ENST00000479739	PHF8	Q9UPP1	1060 aa		12	□□□□□ -0.49
SH3YL1-222	ENST00000479739	NBR1	Q14596	966 aa		11.99	□□□□□ -0.49
SH3YL1-222	ENST00000479739	RCAN3	Q9UKA8	241 aa		11.99	□□□□□ -0.49
SH3YL1-222	ENST00000479739	PARD3	Q8TEW0	1356 aa		11.99	□□□□□ -0.49
SH3YL1-222	ENST00000479739	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.98	□□□□□ -0.49
SH3YL1-222	ENST00000479739	EIF5B	O60841	1220 aa	Known RBP	11.98	□□□□□ -0.49
SH3YL1-222	ENST00000479739	CDK19	Q9BWU1	502 aa		11.98	□□□□□ -0.49
SH3YL1-222	ENST00000479739	RGS17	Q9UGC6	210 aa	Predicted RBP	11.97	□□□□□ -0.49
SH3YL1-222	ENST00000479739	ST20-MTHFS	A0A0A6YYL1	179 aa		11.96	□□□□□ -0.49
SH3YL1-222	ENST00000479739	XPC	Q01831	940 aa	Predicted RBP	11.96	□□□□□ -0.49
SH3YL1-222	ENST00000479739	NUDT16	Q96DE0	195 aa	Known RBP	11.96	□□□□□ -0.49
SH3YL1-222	ENST00000479739	SBNO2	Q9Y2G9	1366 aa		11.96	□□□□□ -0.49
SH3YL1-222	ENST00000479739	SPATA31A3	Q5VYP0	1347 aa		11.96	□□□□□ -0.49
SH3YL1-222	ENST00000479739	ILDR2	Q71H61	639 aa		11.96	□□□□□ -0.49
SH3YL1-222	ENST00000479739	PMFBP1	Q8TBY8	1022 aa		11.96	□□□□□ -0.49
SH3YL1-222	ENST00000479739	KRT28	Q7Z3Y7	464 aa		11.95	□□□□□ -0.5
SH3YL1-222	ENST00000479739	ALS2	Q96Q42	1657 aa		11.95	□□□□□ -0.5
SH3YL1-222	ENST00000479739	TNS3	Q68CZ2	1445 aa		11.95	□□□□□ -0.5
SH3YL1-222	ENST00000479739	SBNO1	A3KN83	1393 aa		11.95	□□□□□ -0.5
SH3YL1-222	ENST00000479739	PHF23	Q9BUL5	403 aa	Predicted RBP	11.95	□□□□□ -0.5
SH3YL1-222	ENST00000479739	CCDC61	Q9Y6R9	512 aa		11.94	□□□□□ -0.5
SH3YL1-222	ENST00000479739	POLR3A	O14802	1390 aa	Predicted RBP	11.94	□□□□□ -0.5
SH3YL1-222	ENST00000479739	PPM1G	O15355	546 aa	Predicted RBP	11.94	□□□□□ -0.5
SH3YL1-222	ENST00000479739	BACH2	Q9BYV9	841 aa		11.94	□□□□□ -0.5
SH3YL1-222	ENST00000479739	BLM	P54132	1417 aa	Predicted RBP	11.94	□□□□□ -0.5
SH3YL1-222	ENST00000479739	MARF1	Q9Y4F3	1742 aa	Known RBP	11.93	□□□□□ -0.5
SH3YL1-222	ENST00000479739	PDE4A	P27815	886 aa		11.93	□□□□□ -0.5
SH3YL1-222	ENST00000479739	EXOC6	Q8TAG9	804 aa		11.93	□□□□□ -0.5
SH3YL1-222	ENST00000479739	DDRGK1	Q96HY6	314 aa		11.93	□□□□□ -0.5
SH3YL1-222	ENST00000479739	ABCA3	Q99758	1704 aa		11.93	□□□□□ -0.5
SH3YL1-222	ENST00000479739	PLEKHG3	A1L390	1219 aa		11.92	□□□□□ -0.5
SH3YL1-222	ENST00000479739	PSME1	Q06323	249 aa		11.92	□□□□□ -0.5
SH3YL1-222	ENST00000479739	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.92	□□□□□ -0.5
SH3YL1-222	ENST00000479739	NUTM2E	B1AL46	878 aa	Predicted RBP	11.92	□□□□□ -0.5
SH3YL1-222	ENST00000479739	CNGB1	Q14028	1251 aa	Predicted RBP	11.92	□□□□□ -0.5
SH3YL1-222	ENST00000479739	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.92	□□□□□ -0.5
SH3YL1-222	ENST00000479739	CABP2	Q9NPB3	220 aa		11.92	□□□□□ -0.5
SH3YL1-222	ENST00000479739	EVC2	Q86UK5	1308 aa		11.92	□□□□□ -0.5
SH3YL1-222	ENST00000479739	SRPK2	P78362	688 aa	Known RBP	11.91	□□□□□ -0.5
SH3YL1-222	ENST00000479739	PPIP5K1	Q6PFW1	1433 aa		11.91	□□□□□ -0.5
SH3YL1-222	ENST00000479739	CRYBG1	Q9Y4K1	1723 aa		11.91	□□□□□ -0.5
SH3YL1-222	ENST00000479739	ACE	P12821	1306 aa		11.9	□□□□□ -0.5
SH3YL1-222	ENST00000479739	ARHGEF10	O15013	1369 aa		11.9	□□□□□ -0.5
SH3YL1-222	ENST00000479739	NGDN	Q8NEJ9	315 aa	Known RBP	11.9	□□□□□ -0.5
SH3YL1-222	ENST00000479739	MEX3C	Q5U5Q3	659 aa	Known RBP	11.9	□□□□□ -0.51
SH3YL1-222	ENST00000479739	POTEA	Q6S8J7	498 aa		11.9	□□□□□ -0.51
SH3YL1-222	ENST00000479739	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.9	□□□□□ -0.51
SH3YL1-222	ENST00000479739	PER1	O15534	1290 aa	Predicted RBP	11.89	□□□□□ -0.51
SH3YL1-222	ENST00000479739	TESK2	Q96S53	571 aa		11.89	□□□□□ -0.51
SH3YL1-222	ENST00000479739	AKAP12	Q02952	1782 aa		11.88	□□□□□ -0.51
SH3YL1-222	ENST00000479739	ADAMTS2	O95450	1211 aa		11.88	□□□□□ -0.51
SH3YL1-222	ENST00000479739	CABP1	Q9NZU7	370 aa		11.87	□□□□□ -0.51
SH3YL1-222	ENST00000479739	AFF2	P51816	1311 aa		11.87	□□□□□ -0.51
SH3YL1-222	ENST00000479739	ATAD2	Q6PL18	1390 aa		11.87	□□□□□ -0.51
SH3YL1-222	ENST00000479739	ZNF772	Q68DY9	489 aa	Predicted RBP	11.87	□□□□□ -0.51
SH3YL1-222	ENST00000479739	C8orf37	Q96NL8	207 aa		11.87	□□□□□ -0.51
SH3YL1-222	ENST00000479739	SSH2	Q76I76	1423 aa		11.86	□□□□□ -0.51
SH3YL1-222	ENST00000479739	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.86	□□□□□ -0.51
SH3YL1-222	ENST00000479739	USP6	P35125	1406 aa		11.86	□□□□□ -0.51
SH3YL1-222	ENST00000479739	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.86	□□□□□ -0.51
SH3YL1-222	ENST00000479739	CPSF1	Q10570	1443 aa	Known RBP	11.85	□□□□□ -0.51
SH3YL1-222	ENST00000479739	NRK	Q7Z2Y5	1582 aa		11.85	□□□□□ -0.51
SH3YL1-222	ENST00000479739	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.85	□□□□□ -0.51
SH3YL1-222	ENST00000479739	NPM2	Q86SE8	214 aa	Known RBP	11.85	□□□□□ -0.51
SH3YL1-222	ENST00000479739	CABLES1	Q8TDN4	633 aa		11.85	□□□□□ -0.51
SH3YL1-222	ENST00000479739	PUS7	Q96PZ0	661 aa	Known RBP	11.85	□□□□□ -0.51
SH3YL1-222	ENST00000479739	MON2	Q7Z3U7	1717 aa		11.85	□□□□□ -0.51
SH3YL1-222	ENST00000479739	NEFM	P07197	916 aa		11.84	□□□□□ -0.51
SH3YL1-222	ENST00000479739	LMOD2	Q6P5Q4	547 aa		11.84	□□□□□ -0.51
SH3YL1-222	ENST00000479739	CD163L1	Q9NR16	1453 aa		11.84	□□□□□ -0.51
SH3YL1-222	ENST00000479739	SLIT2	O94813	1529 aa		11.84	□□□□□ -0.51
SH3YL1-222	ENST00000479739	TMF1	P82094	1093 aa		11.84	□□□□□ -0.51
SH3YL1-222	ENST00000479739	NGLY1	Q96IV0	654 aa		11.84	□□□□□ -0.51
SH3YL1-222	ENST00000479739	BCL9L	Q86UU0	1499 aa		11.84	□□□□□ -0.51
SH3YL1-222	ENST00000479739	NWD2	Q9ULI1	1742 aa		11.83	□□□□□ -0.52
SH3YL1-222	ENST00000479739	PLCH1	Q4KWH8	1693 aa		11.83	□□□□□ -0.52
SH3YL1-222	ENST00000479739	PIK3C2A	O00443	1686 aa		11.83	□□□□□ -0.52

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