RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ACIN1Q9UKV3 1341 aaKnown RBP10.86□□□□□ -0.67
BRCA1-214ENST00000477152 RPGRIP1LQ68CZ1 1315 aa10.86□□□□□ -0.67
BRCA1-214ENST00000477152 LRRC59Q96AG4 307 aaKnown RBP10.86□□□□□ -0.67
BRCA1-214ENST00000477152 SETD1AO15047 1707 aaKnown RBP10.86□□□□□ -0.67
BRCA1-214ENST00000477152 XRN1Q8IZH2 1706 aaKnown RBP10.86□□□□□ -0.67
BRCA1-214ENST00000477152 RRBP1Q9P2E9 1410 aaKnown RBP10.85□□□□□ -0.67
BRCA1-214ENST00000477152 ATN1P54259 1190 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-214ENST00000477152 BRINP3Q76B58 766 aa10.84□□□□□ -0.67
BRCA1-214ENST00000477152 PPARGC1BQ86YN6 1023 aaKnown RBP10.84□□□□□ -0.67
BRCA1-214ENST00000477152 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
BRCA1-214ENST00000477152 NRXN3Q9Y4C0 1643 aa10.83□□□□□ -0.68
BRCA1-214ENST00000477152 PTPRUQ92729 1446 aa10.83□□□□□ -0.68
BRCA1-214ENST00000477152 CLTCL1P53675 1640 aa10.83□□□□□ -0.68
BRCA1-214ENST00000477152 NEXMIFQ5QGS0 1516 aa10.83□□□□□ -0.68
BRCA1-214ENST00000477152 ADGRL3Q9HAR2 1447 aa10.82□□□□□ -0.68
BRCA1-214ENST00000477152 ASXL1Q8IXJ9 1541 aa10.82□□□□□ -0.68
BRCA1-214ENST00000477152 RXRBP28702 533 aa10.82□□□□□ -0.68
BRCA1-214ENST00000477152 NAIPQ13075 1403 aa10.82□□□□□ -0.68
BRCA1-214ENST00000477152 SETD5Q9C0A6 1442 aa10.82□□□□□ -0.68
BRCA1-214ENST00000477152 NHSL1Q5SYE7 1610 aa10.81□□□□□ -0.68
BRCA1-214ENST00000477152 NUTM2BA6NNL0 878 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-214ENST00000477152 NUTM2EB1AL46 878 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-214ENST00000477152 SEMA3EO15041 775 aa10.81□□□□□ -0.68
BRCA1-214ENST00000477152 PDE4AP27815 886 aa10.81□□□□□ -0.68
BRCA1-214ENST00000477152 NUTM2AQ8IVF1 878 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-214ENST00000477152 MST1RQ04912 1400 aa10.81□□□□□ -0.68
BRCA1-214ENST00000477152 METP08581 1390 aa10.81□□□□□ -0.68
BRCA1-214ENST00000477152 HFM1A2PYH4 1435 aa10.8□□□□□ -0.68
BRCA1-214ENST00000477152 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
BRCA1-214ENST00000477152 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
BRCA1-214ENST00000477152 PTCH1Q13635 1447 aa10.8□□□□□ -0.68
BRCA1-214ENST00000477152 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
BRCA1-214ENST00000477152 PDCD7Q8N8D1 485 aaKnown RBP10.79□□□□□ -0.68
BRCA1-214ENST00000477152 CDK12Q9NYV4 1490 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-214ENST00000477152 LRP6O75581 1613 aa10.78□□□□□ -0.68
BRCA1-214ENST00000477152 MFSD10Q14728 455 aa10.78□□□□□ -0.68
BRCA1-214ENST00000477152 NALCNQ8IZF0 1738 aa10.78□□□□□ -0.68
BRCA1-214ENST00000477152 ATMINO43313 823 aaPredicted RBP10.77□□□□□ -0.68
BRCA1-214ENST00000477152 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.68
BRCA1-214ENST00000477152 PPLO60437 1756 aa10.77□□□□□ -0.68
BRCA1-214ENST00000477152 NGLY1Q96IV0 654 aa10.77□□□□□ -0.69
BRCA1-214ENST00000477152 AFF2P51816 1311 aa10.77□□□□□ -0.69
BRCA1-214ENST00000477152 LRPPRCP42704 1394 aaKnown RBP10.76□□□□□ -0.69
BRCA1-214ENST00000477152 CCDC144AA2RUR9 1427 aa10.76□□□□□ -0.69
BRCA1-214ENST00000477152 C1orf167Q5SNV9 1468 aa10.76□□□□□ -0.69
BRCA1-214ENST00000477152 RBM6P78332 1123 aaKnown RBP10.76□□□□□ -0.69
BRCA1-214ENST00000477152 PRAG1Q86YV5 1406 aa10.76□□□□□ -0.69
BRCA1-214ENST00000477152 ANKRD30BQ9BXX2 1392 aa10.75□□□□□ -0.69
BRCA1-214ENST00000477152 C8orf37Q96NL8 207 aa10.75□□□□□ -0.69
BRCA1-214ENST00000477152 PNPLA6Q8IY17 1366 aa10.75□□□□□ -0.69
BRCA1-214ENST00000477152 LAMC1P11047 1609 aa10.74□□□□□ -0.69
BRCA1-214ENST00000477152 MICALL2Q8IY33 904 aa10.74□□□□□ -0.69
BRCA1-214ENST00000477152 NPHP3Q7Z494 1330 aa10.74□□□□□ -0.69
BRCA1-214ENST00000477152 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-214ENST00000477152 QTRT2Q9H974 415 aaKnown RBP10.74□□□□□ -0.69
BRCA1-214ENST00000477152 IRX5P78411 483 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-214ENST00000477152 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
BRCA1-214ENST00000477152 GABBR2O75899 941 aa10.72□□□□□ -0.69
BRCA1-214ENST00000477152 SOS2Q07890 1332 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-214ENST00000477152 ESCO1Q5FWF5 840 aa10.72□□□□□ -0.69
BRCA1-214ENST00000477152 PELP1Q8IZL8 1130 aaKnown RBP10.72□□□□□ -0.69
BRCA1-214ENST00000477152 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-214ENST00000477152 TRPC5Q9UL62 973 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-214ENST00000477152 ROBO2Q9HCK4 1378 aa10.72□□□□□ -0.69
BRCA1-214ENST00000477152 CDC42BPGQ6DT37 1551 aa10.71□□□□□ -0.69
BRCA1-214ENST00000477152 ADAMTS2O95450 1211 aa10.71□□□□□ -0.69
BRCA1-214ENST00000477152 PPP1R15BQ5SWA1 713 aa10.71□□□□□ -0.69
BRCA1-214ENST00000477152 TESPA1A2RU30 521 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-214ENST00000477152 CAMK2BQ13554 666 aa10.7□□□□□ -0.7
BRCA1-214ENST00000477152 DSG2Q14126 1118 aa10.7□□□□□ -0.7
BRCA1-214ENST00000477152 MPHOSPH9Q99550 1183 aa10.7□□□□□ -0.7
BRCA1-214ENST00000477152 RGL3Q3MIN7 710 aa10.7□□□□□ -0.7
BRCA1-214ENST00000477152 ORAI2Q96SN7 254 aa10.7□□□□□ -0.7
BRCA1-214ENST00000477152 USP21Q9UK80 565 aa10.7□□□□□ -0.7
BRCA1-214ENST00000477152 KNDC1Q76NI1 1749 aa10.69□□□□□ -0.7
BRCA1-214ENST00000477152 DDX17Q92841 729 aaKnown RBP10.69□□□□□ -0.7
BRCA1-214ENST00000477152 COL22A1Q8NFW1 1626 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-214ENST00000477152 ATAD2Q6PL18 1390 aa10.69□□□□□ -0.7
BRCA1-214ENST00000477152 SIRT1Q96EB6 747 aa10.68□□□□□ -0.7
BRCA1-214ENST00000477152 OCEL1Q9H607 264 aa10.68□□□□□ -0.7
BRCA1-214ENST00000477152 IFT172Q9UG01 1749 aa10.68□□□□□ -0.7
BRCA1-214ENST00000477152 ABCC11Q96J66 1382 aa10.68□□□□□ -0.7
BRCA1-214ENST00000477152 KIF1AQ12756 1690 aa10.68□□□□□ -0.7
BRCA1-214ENST00000477152 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
BRCA1-214ENST00000477152 STK26Q9P289 416 aa10.68□□□□□ -0.7
BRCA1-214ENST00000477152 TECPR2O15040 1411 aa10.67□□□□□ -0.7
BRCA1-214ENST00000477152 DHX57Q6P158 1386 aaKnown RBP10.67□□□□□ -0.7
BRCA1-214ENST00000477152 PSME1Q06323 249 aa10.67□□□□□ -0.7
BRCA1-214ENST00000477152 MARF1Q9Y4F3 1742 aaKnown RBP10.67□□□□□ -0.7
BRCA1-214ENST00000477152 ADGRF5Q8IZF2 1346 aa10.67□□□□□ -0.7
BRCA1-214ENST00000477152 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-214ENST00000477152 COLQQ9Y215 455 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-214ENST00000477152 CLCN6P51797 869 aa10.66□□□□□ -0.7
BRCA1-214ENST00000477152 CCDC125Q86Z20 511 aa10.66□□□□□ -0.7
BRCA1-214ENST00000477152 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
BRCA1-214ENST00000477152 SPATA31E1Q6ZUB1 1445 aa10.66□□□□□ -0.7
BRCA1-214ENST00000477152 FOXO3O43524 673 aa10.65□□□□□ -0.7
BRCA1-214ENST00000477152 RGS12O14924 1447 aa10.65□□□□□ -0.7
BRCA1-214ENST00000477152 PIK3C2GO75747 1445 aa10.65□□□□□ -0.71
BRCA1-214ENST00000477152 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms