RNA–Protein interactions for RNA: ENST00000475877.5

BRD7-204, Transcript of bromodomain containing 7, humanhuman

TSL 3

Gene BRD7, Length 671 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7-204ENST00000475877 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
BRD7-204ENST00000475877 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
BRD7-204ENST00000475877 TRPM2O94759 1503 aa13.35□□□□□ -0.27
BRD7-204ENST00000475877 CCDC125Q86Z20 511 aa13.35□□□□□ -0.27
BRD7-204ENST00000475877 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
BRD7-204ENST00000475877 ZNF326Q5BKZ1 582 aaKnown RBP13.34□□□□□ -0.27
BRD7-204ENST00000475877 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
BRD7-204ENST00000475877 ADAMTS2O95450 1211 aa13.33□□□□□ -0.28
BRD7-204ENST00000475877 PDAP1Q13442 181 aaKnown RBP13.33□□□□□ -0.28
BRD7-204ENST00000475877 USP21Q9UK80 565 aa13.33□□□□□ -0.28
BRD7-204ENST00000475877 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
BRD7-204ENST00000475877 ASXL1Q8IXJ9 1541 aa13.31□□□□□ -0.28
BRD7-204ENST00000475877 SPOCK2Q92563 424 aa13.31□□□□□ -0.28
BRD7-204ENST00000475877 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
BRD7-204ENST00000475877 RGS12O14924 1447 aa13.3□□□□□ -0.28
BRD7-204ENST00000475877 MST1RQ04912 1400 aa13.3□□□□□ -0.28
BRD7-204ENST00000475877 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
BRD7-204ENST00000475877 MYO5BQ9ULV0 1848 aa13.29□□□□□ -0.28
BRD7-204ENST00000475877 EMP3P54852 163 aa13.29□□□□□ -0.28
BRD7-204ENST00000475877 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
BRD7-204ENST00000475877 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
BRD7-204ENST00000475877 DDX17Q92841 729 aaKnown RBP13.28□□□□□ -0.28
BRD7-204ENST00000475877 NUP155O75694 1391 aa13.28□□□□□ -0.28
BRD7-204ENST00000475877 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.29
BRD7-204ENST00000475877 SPNS2Q8IVW8 549 aa13.27□□□□□ -0.29
BRD7-204ENST00000475877 FNBP4Q8N3X1 1017 aaPredicted RBP13.27□□□□□ -0.29
BRD7-204ENST00000475877 MMRN1Q13201 1228 aa13.26□□□□□ -0.29
BRD7-204ENST00000475877 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
BRD7-204ENST00000475877 G3V3G9 751 aa13.25□□□□□ -0.29
BRD7-204ENST00000475877 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
BRD7-204ENST00000475877 METP08581 1390 aa13.24□□□□□ -0.29
BRD7-204ENST00000475877 SOS2Q07890 1332 aaPredicted RBP13.24□□□□□ -0.29
BRD7-204ENST00000475877 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
BRD7-204ENST00000475877 ROCK1Q13464 1354 aa13.23□□□□□ -0.29
BRD7-204ENST00000475877 VGFO15240 615 aaPredicted RBP13.23□□□□□ -0.29
BRD7-204ENST00000475877 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
BRD7-204ENST00000475877 UNC13BO14795 1591 aa13.23□□□□□ -0.29
BRD7-204ENST00000475877 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
BRD7-204ENST00000475877 E9PCH4 1651 aa13.21□□□□□ -0.29
BRD7-204ENST00000475877 SETBP1Q9Y6X0 1596 aa13.21□□□□□ -0.29
BRD7-204ENST00000475877 GJD4Q96KN9 370 aaPredicted RBP13.21□□□□□ -0.29
BRD7-204ENST00000475877 ORAI2Q96SN7 254 aa13.21□□□□□ -0.29
BRD7-204ENST00000475877 NPHP3Q7Z494 1330 aa13.2□□□□□ -0.3
BRD7-204ENST00000475877 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
BRD7-204ENST00000475877 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
BRD7-204ENST00000475877 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
BRD7-204ENST00000475877 ESCO1Q5FWF5 840 aa13.19□□□□□ -0.3
BRD7-204ENST00000475877 IQGAP3Q86VI3 1631 aa13.19□□□□□ -0.3
BRD7-204ENST00000475877 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
BRD7-204ENST00000475877 ITGAEP38570 1179 aa13.18□□□□□ -0.3
BRD7-204ENST00000475877 ATRNO75882 1429 aa13.18□□□□□ -0.3
BRD7-204ENST00000475877 HS3ST6Q96QI5 342 aa13.17□□□□□ -0.3
BRD7-204ENST00000475877 RPGRIP1LQ68CZ1 1315 aa13.16□□□□□ -0.3
BRD7-204ENST00000475877 TRIM26Q12899 539 aaPredicted RBP13.16□□□□□ -0.3
BRD7-204ENST00000475877 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
BRD7-204ENST00000475877 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
BRD7-204ENST00000475877 BLMP54132 1417 aaPredicted RBP13.14□□□□□ -0.31
BRD7-204ENST00000475877 NRXN3Q9Y4C0 1643 aa13.14□□□□□ -0.31
BRD7-204ENST00000475877 FOXO3O43524 673 aa13.14□□□□□ -0.31
BRD7-204ENST00000475877 HAP1P54257 671 aaPredicted RBP13.14□□□□□ -0.31
BRD7-204ENST00000475877 ACIN1Q9UKV3 1341 aaKnown RBP13.13□□□□□ -0.31
BRD7-204ENST00000475877 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
BRD7-204ENST00000475877 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
BRD7-204ENST00000475877 BCL9LQ86UU0 1499 aa13.12□□□□□ -0.31
BRD7-204ENST00000475877 LAMC1P11047 1609 aa13.12□□□□□ -0.31
BRD7-204ENST00000475877 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
BRD7-204ENST00000475877 NALCNQ8IZF0 1738 aa13.1□□□□□ -0.31
BRD7-204ENST00000475877 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
BRD7-204ENST00000475877 SPHKAPQ2M3C7 1700 aa13.1□□□□□ -0.31
BRD7-204ENST00000475877 MYOM2P54296 1465 aa13.1□□□□□ -0.31
BRD7-204ENST00000475877 BAG6P46379 1132 aa13.09□□□□□ -0.31
BRD7-204ENST00000475877 XPCQ01831 940 aaPredicted RBP13.09□□□□□ -0.31
BRD7-204ENST00000475877 PSME1Q06323 249 aa13.09□□□□□ -0.31
BRD7-204ENST00000475877 ZNF710Q8N1W2 664 aa13.09□□□□□ -0.31
BRD7-204ENST00000475877 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
BRD7-204ENST00000475877 COL22A1Q8NFW1 1626 aaPredicted RBP13.09□□□□□ -0.31
BRD7-204ENST00000475877 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.31
BRD7-204ENST00000475877 DEFB132Q7Z7B7 95 aa13.08□□□□□ -0.32
BRD7-204ENST00000475877 SEPT12Q8IYM1 358 aa13.08□□□□□ -0.32
BRD7-204ENST00000475877 KRTAP3-3Q9BYR6 98 aa13.08□□□□□ -0.32
BRD7-204ENST00000475877 KRTAP3-2Q9BYR7 98 aa13.08□□□□□ -0.32
BRD7-204ENST00000475877 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
BRD7-204ENST00000475877 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
BRD7-204ENST00000475877 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
BRD7-204ENST00000475877 PRAG1Q86YV5 1406 aa13.06□□□□□ -0.32
BRD7-204ENST00000475877 A0A0G2JS52 829 aa13.06□□□□□ -0.32
BRD7-204ENST00000475877 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
BRD7-204ENST00000475877 VPS72Q15906 364 aa13.06□□□□□ -0.32
BRD7-204ENST00000475877 SPATA31A3Q5VYP0 1347 aa13.06□□□□□ -0.32
BRD7-204ENST00000475877 KIF1BO60333 1816 aa13.06□□□□□ -0.32
BRD7-204ENST00000475877 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
BRD7-204ENST00000475877 ONECUT3O60422 494 aaPredicted RBP13.05□□□□□ -0.32
BRD7-204ENST00000475877 STK26Q9P289 416 aa13.05□□□□□ -0.32
BRD7-204ENST00000475877 PXDNQ92626 1479 aa13.04□□□□□ -0.32
BRD7-204ENST00000475877 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
BRD7-204ENST00000475877 CCDC144AA2RUR9 1427 aa13.03□□□□□ -0.32
BRD7-204ENST00000475877 SLIT2O94813 1529 aa13.03□□□□□ -0.32
BRD7-204ENST00000475877 CLTCL1P53675 1640 aa13.02□□□□□ -0.32
BRD7-204ENST00000475877 LMOD2Q6P5Q4 547 aa13.02□□□□□ -0.33
BRD7-204ENST00000475877 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms