RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 MSS51Q4VC12 460 aa8□□□□□ -1.13
SDHB-204ENST00000475049 FAM160A2Q8N612 972 aaPredicted RBP8□□□□□ -1.13
SDHB-204ENST00000475049 EPS8L1Q8TE68 723 aa8□□□□□ -1.13
SDHB-204ENST00000475049 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
SDHB-204ENST00000475049 ZNF777Q9ULD5 760 aaPredicted RBP8□□□□□ -1.13
SDHB-204ENST00000475049 PDZRN3Q9UPQ7 1066 aa8□□□□□ -1.13
SDHB-204ENST00000475049 CTHP32929 405 aa7.99□□□□□ -1.13
SDHB-204ENST00000475049 SPRYD7Q5W111 196 aa7.99□□□□□ -1.13
SDHB-204ENST00000475049 PNMA1Q8ND90 353 aa7.99□□□□□ -1.13
SDHB-204ENST00000475049 PRDM9Q9NQV7 894 aa7.99□□□□□ -1.13
SDHB-204ENST00000475049 PTPRNQ16849 979 aa7.98□□□□□ -1.13
SDHB-204ENST00000475049 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
SDHB-204ENST00000475049 TRIM67Q6ZTA4 783 aa7.98□□□□□ -1.13
SDHB-204ENST00000475049 FNBP4Q8N3X1 1017 aaPredicted RBP7.98□□□□□ -1.13
SDHB-204ENST00000475049 ARID3AQ99856 593 aa7.98□□□□□ -1.13
SDHB-204ENST00000475049 DXOO77932 396 aaKnown RBP7.97□□□□□ -1.13
SDHB-204ENST00000475049 CCNYL3P0C7X3 344 aa7.97□□□□□ -1.13
SDHB-204ENST00000475049 ZNF598Q86UK7 904 aaKnown RBP7.97□□□□□ -1.13
SDHB-204ENST00000475049 CCDC24Q8N4L8 307 aa7.97□□□□□ -1.13
SDHB-204ENST00000475049 NUDT12Q9BQG2 462 aa7.97□□□□□ -1.13
SDHB-204ENST00000475049 TRAF7Q6Q0C0 670 aa7.96□□□□□ -1.14
SDHB-204ENST00000475049 MAP10Q9P2G4 905 aa7.96□□□□□ -1.14
SDHB-204ENST00000475049 MMP16P51512 607 aa7.95□□□□□ -1.14
SDHB-204ENST00000475049 WASHC4Q2M389 1173 aa7.94□□□□□ -1.14
SDHB-204ENST00000475049 C1orf115Q9H7X2 142 aa7.94□□□□□ -1.14
SDHB-204ENST00000475049 F12P00748 615 aaPredicted RBP7.93□□□□□ -1.14
SDHB-204ENST00000475049 PRR20EP86478 221 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 PRR20CP86479 221 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 PRR20DP86480 221 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 PRR20BP86481 221 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 PRR20AP86496 221 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 KCNH2Q12809 1159 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 IRF5Q13568 498 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 ZNF697Q5TEC3 545 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 EVA1BQ9NVM1 165 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 FKBPLQ9UIM3 349 aa7.93□□□□□ -1.14
SDHB-204ENST00000475049 VAC14Q08AM6 782 aa7.92□□□□□ -1.14
SDHB-204ENST00000475049 POM121CA8CG34 1229 aa7.91□□□□□ -1.14
SDHB-204ENST00000475049 GDF9O60383 454 aa7.91□□□□□ -1.14
SDHB-204ENST00000475049 RPIAP49247 311 aa7.91□□□□□ -1.14
SDHB-204ENST00000475049 CCDC82Q8N4S0 544 aa7.91□□□□□ -1.14
SDHB-204ENST00000475049 ARMC2Q8NEN0 867 aa7.91□□□□□ -1.14
SDHB-204ENST00000475049 CCDC97Q96F63 343 aaPredicted RBP7.91□□□□□ -1.14
SDHB-204ENST00000475049 CALR3Q96L12 384 aaKnown RBP7.91□□□□□ -1.14
SDHB-204ENST00000475049 FCF1Q9Y324 198 aaKnown RBP7.91□□□□□ -1.14
SDHB-204ENST00000475049 GPR37L1O60883 481 aa7.9□□□□□ -1.14
SDHB-204ENST00000475049 GLMNQ92990 594 aa7.89□□□□□ -1.15
SDHB-204ENST00000475049 PKD2L1Q9P0L9 805 aa7.89□□□□□ -1.15
SDHB-204ENST00000475049 ZC3H4Q9UPT8 1303 aaKnown RBP7.88□□□□□ -1.15
SDHB-204ENST00000475049 HDGFL1Q5TGJ6 251 aa7.88□□□□□ -1.15
SDHB-204ENST00000475049 NBPF14Q5TI25 921 aa7.88□□□□□ -1.15
SDHB-204ENST00000475049 UNC93B1Q9H1C4 597 aa7.88□□□□□ -1.15
SDHB-204ENST00000475049 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
SDHB-204ENST00000475049 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
SDHB-204ENST00000475049 ZBBXA8MT70 800 aa7.86□□□□□ -1.15
SDHB-204ENST00000475049 TNFRSF10AO00220 468 aa7.86□□□□□ -1.15
SDHB-204ENST00000475049 ZBTB24O43167 697 aaPredicted RBP7.86□□□□□ -1.15
SDHB-204ENST00000475049 DGAT1O75907 488 aa7.86□□□□□ -1.15
SDHB-204ENST00000475049 CD2BP2O95400 341 aaKnown RBP7.86□□□□□ -1.15
SDHB-204ENST00000475049 FBXO45P0C2W1 286 aa7.86□□□□□ -1.15
SDHB-204ENST00000475049 EIF4G2P78344 907 aaKnown RBP eCLIP7.86□□□□□ -1.15
SDHB-204ENST00000475049 PTK2Q05397 1052 aa7.86□□□□□ -1.15
SDHB-204ENST00000475049 NR1H3Q13133 447 aa7.86□□□□□ -1.15
SDHB-204ENST00000475049 SEMA3FQ13275 785 aa7.86□□□□□ -1.15
SDHB-204ENST00000475049 AGERQ15109 404 aa7.85□□□□□ -1.15
SDHB-204ENST00000475049 LINC01559Q495D7 138 aa7.85□□□□□ -1.15
SDHB-204ENST00000475049 GPKOWQ92917 476 aaPredicted RBP eCLIP7.85□□□□□ -1.15
SDHB-204ENST00000475049 SOX11P35716 441 aa7.84□□□□□ -1.15
SDHB-204ENST00000475049 MYT1Q01538 1121 aa7.84□□□□□ -1.15
SDHB-204ENST00000475049 FOXC1Q12948 553 aa7.84□□□□□ -1.15
SDHB-204ENST00000475049 PKDCCQ504Y2 493 aa7.84□□□□□ -1.15
SDHB-204ENST00000475049 PDXDC2PQ6P474 469 aa7.84□□□□□ -1.15
SDHB-204ENST00000475049 BAP1Q92560 729 aa7.84□□□□□ -1.15
SDHB-204ENST00000475049 ARXQ96QS3 562 aa7.84□□□□□ -1.15
SDHB-204ENST00000475049 ARHGAP9Q9BRR9 750 aa7.84□□□□□ -1.15
SDHB-204ENST00000475049 ZBTB33Q86T24 672 aa7.83□□□□□ -1.16
SDHB-204ENST00000475049 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
SDHB-204ENST00000475049 MAGEB6P1A0A0J9YX57 407 aa7.82□□□□□ -1.16
SDHB-204ENST00000475049 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
SDHB-204ENST00000475049 ADAMTS19Q8TE59 1207 aa7.82□□□□□ -1.16
SDHB-204ENST00000475049 GPSM3Q9Y4H4 160 aa7.82□□□□□ -1.16
SDHB-204ENST00000475049 PCDHB9Q9Y5E1 797 aa7.82□□□□□ -1.16
SDHB-204ENST00000475049 FAM187AA6NFU0 413 aa7.81□□□□□ -1.16
SDHB-204ENST00000475049 ALG2Q9H553 416 aa7.81□□□□□ -1.16
SDHB-204ENST00000475049 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
SDHB-204ENST00000475049 BPHLQ86WA6 291 aaPredicted RBP7.8□□□□□ -1.16
SDHB-204ENST00000475049 ZNF511Q8NB15 262 aa7.8□□□□□ -1.16
SDHB-204ENST00000475049 TRIM32Q13049 653 aa7.79□□□□□ -1.16
SDHB-204ENST00000475049 ZNF787Q6DD87 383 aa7.79□□□□□ -1.16
SDHB-204ENST00000475049 ADAM32Q8TC27 787 aa7.79□□□□□ -1.16
SDHB-204ENST00000475049 ZNF592Q92610 1267 aa7.79□□□□□ -1.16
SDHB-204ENST00000475049 FOXJ1Q92949 421 aa7.79□□□□□ -1.16
SDHB-204ENST00000475049 WNT7AO00755 349 aa7.78□□□□□ -1.16
SDHB-204ENST00000475049 SH3BP5LQ7L8J4 393 aa7.78□□□□□ -1.16
SDHB-204ENST00000475049 DZIP3Q86Y13 1208 aaKnown RBP7.78□□□□□ -1.16
SDHB-204ENST00000475049 RFX1P22670 979 aa7.77□□□□□ -1.17
SDHB-204ENST00000475049 CYP4X1Q8N118 509 aa7.77□□□□□ -1.17
SDHB-204ENST00000475049 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
SDHB-204ENST00000475049 MCCD1P59942 119 aaPredicted RBP7.76□□□□□ -1.17
SDHB-204ENST00000475049 SH3BP2P78314 561 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms