RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
ABCF3-210ENST00000473311 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
ABCF3-210ENST00000473311 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
ABCF3-210ENST00000473311 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-210ENST00000473311 A0A0U1RQG5 324 aaPredicted RBP17.71■□□□□ 0.42
ABCF3-210ENST00000473311 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
ABCF3-210ENST00000473311 ABCC11Q96J66 1382 aa17.7■□□□□ 0.42
ABCF3-210ENST00000473311 L1TD1Q5T7N2 865 aaKnown RBP17.7■□□□□ 0.42
ABCF3-210ENST00000473311 PIK3C2BO00750 1634 aa17.69■□□□□ 0.42
ABCF3-210ENST00000473311 TRIM27P14373 513 aa17.69■□□□□ 0.42
ABCF3-210ENST00000473311 ITPRIPQ8IWB1 547 aa17.69■□□□□ 0.42
ABCF3-210ENST00000473311 TBC1D2Q9BYX2 928 aa17.69■□□□□ 0.42
ABCF3-210ENST00000473311 SSH1Q8WYL5 1049 aa17.68■□□□□ 0.42
ABCF3-210ENST00000473311 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
ABCF3-210ENST00000473311 POGKQ9P215 609 aa17.68■□□□□ 0.42
ABCF3-210ENST00000473311 RAPGEF3O95398 923 aa17.68■□□□□ 0.42
ABCF3-210ENST00000473311 RBM10P98175 930 aaKnown RBP17.68■□□□□ 0.42
ABCF3-210ENST00000473311 PNNQ9H307 717 aaKnown RBP17.68■□□□□ 0.42
ABCF3-210ENST00000473311 IDI1Q13907 227 aa17.67■□□□□ 0.42
ABCF3-210ENST00000473311 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
ABCF3-210ENST00000473311 FGD1P98174 961 aa17.67■□□□□ 0.42
ABCF3-210ENST00000473311 NAP1L5Q96NT1 182 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-210ENST00000473311 ANTXR1Q9H6X2 564 aa17.67■□□□□ 0.42
ABCF3-210ENST00000473311 DDX19BQ9UMR2 479 aa17.67■□□□□ 0.42
ABCF3-210ENST00000473311 MINK1Q8N4C8 1332 aaPredicted RBP17.66■□□□□ 0.42
ABCF3-210ENST00000473311 ATF7IPQ6VMQ6 1270 aa17.66■□□□□ 0.42
ABCF3-210ENST00000473311 TERF2IPQ9NYB0 399 aa17.65■□□□□ 0.42
ABCF3-210ENST00000473311 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
ABCF3-210ENST00000473311 RIPK4P57078 832 aa17.65■□□□□ 0.42
ABCF3-210ENST00000473311 SPRYD3Q8NCJ5 442 aa17.65■□□□□ 0.42
ABCF3-210ENST00000473311 NOB1Q9ULX3 412 aaKnown RBP17.65■□□□□ 0.42
ABCF3-210ENST00000473311 FYB1O15117 783 aa17.64■□□□□ 0.41
ABCF3-210ENST00000473311 COL3A1P02461 1466 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-210ENST00000473311 CLCN1P35523 988 aa17.64■□□□□ 0.41
ABCF3-210ENST00000473311 HDAC1Q13547 482 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-210ENST00000473311 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
ABCF3-210ENST00000473311 C22orf23Q9BZE7 217 aa17.63■□□□□ 0.41
ABCF3-210ENST00000473311 PRAM1Q96QH2 718 aa17.62■□□□□ 0.41
ABCF3-210ENST00000473311 DIAPH1O60610 1272 aaKnown RBP17.62■□□□□ 0.41
ABCF3-210ENST00000473311 TMEM57Q8N5G2 664 aa17.62■□□□□ 0.41
ABCF3-210ENST00000473311 RRAGDQ9NQL2 400 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-210ENST00000473311 IL16Q14005 1332 aa17.62■□□□□ 0.41
ABCF3-210ENST00000473311 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
ABCF3-210ENST00000473311 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
ABCF3-210ENST00000473311 ANKRD26Q9UPS8 1709 aa17.6■□□□□ 0.41
ABCF3-210ENST00000473311 KIF16BQ96L93 1317 aa17.6■□□□□ 0.41
ABCF3-210ENST00000473311 PDE4CQ08493 712 aa17.6■□□□□ 0.41
ABCF3-210ENST00000473311 DIP2CQ9Y2E4 1556 aa17.6■□□□□ 0.41
ABCF3-210ENST00000473311 ZFYVE9O95405 1425 aa17.6■□□□□ 0.41
ABCF3-210ENST00000473311 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-210ENST00000473311 PTPRMP28827 1452 aa17.59■□□□□ 0.41
ABCF3-210ENST00000473311 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
ABCF3-210ENST00000473311 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
ABCF3-210ENST00000473311 SMC5Q8IY18 1101 aa17.59■□□□□ 0.41
ABCF3-210ENST00000473311 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
ABCF3-210ENST00000473311 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.4
ABCF3-210ENST00000473311 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.4
ABCF3-210ENST00000473311 MED14O60244 1454 aa17.58■□□□□ 0.4
ABCF3-210ENST00000473311 PDCL3Q9H2J4 239 aa17.57■□□□□ 0.4
ABCF3-210ENST00000473311 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
ABCF3-210ENST00000473311 NEO1Q92859 1461 aa17.57■□□□□ 0.4
ABCF3-210ENST00000473311 CDK19Q9BWU1 502 aa17.56■□□□□ 0.4
ABCF3-210ENST00000473311 CABP1Q9NZU7 370 aa17.56■□□□□ 0.4
ABCF3-210ENST00000473311 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
ABCF3-210ENST00000473311 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
ABCF3-210ENST00000473311 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
ABCF3-210ENST00000473311 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
ABCF3-210ENST00000473311 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
ABCF3-210ENST00000473311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
ABCF3-210ENST00000473311 ARXQ96QS3 562 aa17.54■□□□□ 0.4
ABCF3-210ENST00000473311 CHMP5Q9NZZ3 219 aa17.54■□□□□ 0.4
ABCF3-210ENST00000473311 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
ABCF3-210ENST00000473311 FCHSD2O94868 740 aa17.53■□□□□ 0.4
ABCF3-210ENST00000473311 MCM4P33991 863 aa17.53■□□□□ 0.4
ABCF3-210ENST00000473311 HSCBQ8IWL3 235 aa17.53■□□□□ 0.4
ABCF3-210ENST00000473311 PREX1Q8TCU6 1659 aa17.53■□□□□ 0.4
ABCF3-210ENST00000473311 LRRC7Q96NW7 1537 aa17.53■□□□□ 0.4
ABCF3-210ENST00000473311 FBLN1P23142 703 aa17.53■□□□□ 0.4
ABCF3-210ENST00000473311 KIF20BQ96Q89 1820 aa17.53■□□□□ 0.4
ABCF3-210ENST00000473311 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.4
ABCF3-210ENST00000473311 NUCB1Q02818 461 aa17.52■□□□□ 0.4
ABCF3-210ENST00000473311 TPM2P07951 284 aa17.51■□□□□ 0.39
ABCF3-210ENST00000473311 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
ABCF3-210ENST00000473311 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
ABCF3-210ENST00000473311 CHD1LQ86WJ1 897 aa17.5■□□□□ 0.39
ABCF3-210ENST00000473311 GZF1Q9H116 711 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-210ENST00000473311 HMOX1P09601 288 aa17.5■□□□□ 0.39
ABCF3-210ENST00000473311 FBXO31Q5XUX0 539 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-210ENST00000473311 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
ABCF3-210ENST00000473311 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
ABCF3-210ENST00000473311 POLKQ9UBT6 870 aa17.49■□□□□ 0.39
ABCF3-210ENST00000473311 ALKQ9UM73 1620 aa17.49■□□□□ 0.39
ABCF3-210ENST00000473311 ARHGEF40Q8TER5 1519 aa17.49■□□□□ 0.39
ABCF3-210ENST00000473311 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
ABCF3-210ENST00000473311 ZNF428Q96B54 188 aa17.48■□□□□ 0.39
ABCF3-210ENST00000473311 CDC42BPGQ6DT37 1551 aa17.47■□□□□ 0.39
ABCF3-210ENST00000473311 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
ABCF3-210ENST00000473311 ANKRD45Q5TZF3 282 aa17.47■□□□□ 0.39
ABCF3-210ENST00000473311 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
ABCF3-210ENST00000473311 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms