RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 GBP4Q96PP9 640 aa15.05■□□□□ -0
IRF1-208ENST00000472045 ABCC2Q92887 1545 aa15.05■□□□□ -0
IRF1-208ENST00000472045 KIAA0556O60303 1618 aa15.05■□□□□ -0
IRF1-208ENST00000472045 CCDC27Q2M243 656 aa15.04■□□□□ -0
IRF1-208ENST00000472045 DNTTIP2Q5QJE6 756 aaKnown RBP15.04■□□□□ -0
IRF1-208ENST00000472045 BTBD11A6QL63 1104 aa15.04■□□□□ -0
IRF1-208ENST00000472045 DHX16O60231 1041 aaKnown RBP15.04■□□□□ -0
IRF1-208ENST00000472045 HSPA2P54652 639 aa15.04■□□□□ -0
IRF1-208ENST00000472045 EXOSC9Q06265 439 aaKnown RBP15.03■□□□□ -0
IRF1-208ENST00000472045 TRDNQ13061 729 aa15.03■□□□□ -0
IRF1-208ENST00000472045 CPLX2Q6PUV4 134 aaKnown RBP15.03■□□□□ -0
IRF1-208ENST00000472045 ABCC10Q5T3U5 1492 aa15.03■□□□□ -0
IRF1-208ENST00000472045 ZKSCAN1P17029 563 aaPredicted RBP15.03■□□□□ -0
IRF1-208ENST00000472045 NME9Q86XW9 330 aa15.03■□□□□ -0
IRF1-208ENST00000472045 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
IRF1-208ENST00000472045 MYL6BP14649 208 aa15.02■□□□□ -0
IRF1-208ENST00000472045 TMOD3Q9NYL9 352 aa15.02■□□□□ -0
IRF1-208ENST00000472045 C14orf93Q9H972 538 aaKnown RBP15.02□□□□□ -0.01
IRF1-208ENST00000472045 SLKQ9H2G2 1235 aaPredicted RBP15.02□□□□□ -0.01
IRF1-208ENST00000472045 CNNM1Q9NRU3 951 aa15.01□□□□□ -0.01
IRF1-208ENST00000472045 WASHC4Q2M389 1173 aa15.01□□□□□ -0.01
IRF1-208ENST00000472045 DUOX2Q9NRD8 1548 aa15.01□□□□□ -0.01
IRF1-208ENST00000472045 NUP160Q12769 1436 aa15.01□□□□□ -0.01
IRF1-208ENST00000472045 FCHSD2O94868 740 aa15.01□□□□□ -0.01
IRF1-208ENST00000472045 STARD3NLO95772 234 aa15.01□□□□□ -0.01
IRF1-208ENST00000472045 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
IRF1-208ENST00000472045 FAM184AQ8NB25 1140 aa15.01□□□□□ -0.01
IRF1-208ENST00000472045 FYB1O15117 783 aa15□□□□□ -0.01
IRF1-208ENST00000472045 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
IRF1-208ENST00000472045 TCEAL9Q9UHQ7 104 aa15□□□□□ -0.01
IRF1-208ENST00000472045 GNAT3A8MTJ3 354 aa15□□□□□ -0.01
IRF1-208ENST00000472045 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
IRF1-208ENST00000472045 REC8O95072 547 aa15□□□□□ -0.01
IRF1-208ENST00000472045 H3BQV1 296 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 IFFO2Q5TF58 517 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 RNF20Q5VTR2 975 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 DRC7Q8IY82 874 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 EXOC5O00471 708 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 SF3A1Q15459 793 aaKnown RBP14.99□□□□□ -0.01
IRF1-208ENST00000472045 CSPP1Q1MSJ5 1256 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 TBC1D2BQ9UPU7 963 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 ERICH2A1L162 156 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 PTMSP20962 102 aa14.99□□□□□ -0.01
IRF1-208ENST00000472045 TSR2Q969E8 191 aaKnown RBP14.99□□□□□ -0.01
IRF1-208ENST00000472045 WWC1Q8IX03 1113 aa14.98□□□□□ -0.01
IRF1-208ENST00000472045 PANK1Q8TE04 598 aa14.98□□□□□ -0.01
IRF1-208ENST00000472045 ANO2Q9NQ90 1003 aa14.98□□□□□ -0.01
IRF1-208ENST00000472045 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
IRF1-208ENST00000472045 SURF6O75683 361 aaKnown RBP14.98□□□□□ -0.01
IRF1-208ENST00000472045 AMOTQ4VCS5 1084 aa14.98□□□□□ -0.01
IRF1-208ENST00000472045 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
IRF1-208ENST00000472045 CLASRPQ8N2M8 674 aaKnown RBP14.98□□□□□ -0.01
IRF1-208ENST00000472045 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
IRF1-208ENST00000472045 USHBP1Q8N6Y0 703 aa14.98□□□□□ -0.01
IRF1-208ENST00000472045 GNL3LQ9NVN8 582 aaKnown RBP14.98□□□□□ -0.01
IRF1-208ENST00000472045 ITSN2Q9NZM3 1697 aa14.98□□□□□ -0.01
IRF1-208ENST00000472045 RIMS2Q9UQ26 1411 aa14.97□□□□□ -0.01
IRF1-208ENST00000472045 PTCD1O75127 700 aaKnown RBP14.97□□□□□ -0.01
IRF1-208ENST00000472045 CTTNBP2Q8WZ74 1663 aa14.97□□□□□ -0.01
IRF1-208ENST00000472045 NFXL1Q6ZNB6 911 aa14.97□□□□□ -0.01
IRF1-208ENST00000472045 NPHP3Q7Z494 1330 aa14.97□□□□□ -0.01
IRF1-208ENST00000472045 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
IRF1-208ENST00000472045 CPLX1O14810 134 aa14.96□□□□□ -0.01
IRF1-208ENST00000472045 SYAP1Q96A49 352 aaPredicted RBP14.96□□□□□ -0.01
IRF1-208ENST00000472045 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
IRF1-208ENST00000472045 AAMPQ13685 434 aa14.96□□□□□ -0.01
IRF1-208ENST00000472045 NFE2L2Q16236 605 aa14.96□□□□□ -0.01
IRF1-208ENST00000472045 MPHOSPH8Q99549 860 aa14.96□□□□□ -0.02
IRF1-208ENST00000472045 TRIM29Q14134 588 aa14.95□□□□□ -0.02
IRF1-208ENST00000472045 MPRIPQ6WCQ1 1025 aa14.95□□□□□ -0.02
IRF1-208ENST00000472045 LNPKQ9C0E8 428 aa14.95□□□□□ -0.02
IRF1-208ENST00000472045 ACEP12821 1306 aa14.95□□□□□ -0.02
IRF1-208ENST00000472045 ZPR1O75312 459 aa14.95□□□□□ -0.02
IRF1-208ENST00000472045 ZNF652Q9Y2D9 606 aa14.95□□□□□ -0.02
IRF1-208ENST00000472045 SCAF11Q99590 1463 aaKnown RBP14.94□□□□□ -0.02
IRF1-208ENST00000472045 ZMYM3Q14202 1370 aa14.94□□□□□ -0.02
IRF1-208ENST00000472045 GNAI2P04899 355 aa14.94□□□□□ -0.02
IRF1-208ENST00000472045 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
IRF1-208ENST00000472045 CHAF1AQ13111 956 aaPredicted RBP14.94□□□□□ -0.02
IRF1-208ENST00000472045 ERC1Q8IUD2 1116 aa14.94□□□□□ -0.02
IRF1-208ENST00000472045 TPM4P67936 248 aa14.94□□□□□ -0.02
IRF1-208ENST00000472045 RALYLQ86SE5 291 aaKnown RBP14.94□□□□□ -0.02
IRF1-208ENST00000472045 WDR63Q8IWG1 891 aa14.94□□□□□ -0.02
IRF1-208ENST00000472045 EMILIN1Q9Y6C2 1016 aa14.94□□□□□ -0.02
IRF1-208ENST00000472045 CCDC57Q2TAC2 916 aa14.93□□□□□ -0.02
IRF1-208ENST00000472045 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
IRF1-208ENST00000472045 ZNF428Q96B54 188 aa14.93□□□□□ -0.02
IRF1-208ENST00000472045 FSD1Q9BTV5 496 aa14.93□□□□□ -0.02
IRF1-208ENST00000472045 CHRNA2Q15822 529 aa14.93□□□□□ -0.02
IRF1-208ENST00000472045 CCDC158Q5M9N0 1113 aa14.93□□□□□ -0.02
IRF1-208ENST00000472045 CDCA7LQ96GN5 454 aa14.93□□□□□ -0.02
IRF1-208ENST00000472045 DNAJC2Q99543 621 aaKnown RBP14.93□□□□□ -0.02
IRF1-208ENST00000472045 NINLQ9Y2I6 1382 aa14.92□□□□□ -0.02
IRF1-208ENST00000472045 KIAA2012Q0VF49 1180 aa14.92□□□□□ -0.02
IRF1-208ENST00000472045 TTC39AQ5SRH9 613 aa14.92□□□□□ -0.02
IRF1-208ENST00000472045 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
IRF1-208ENST00000472045 INTS3Q68E01 1043 aaKnown RBP14.92□□□□□ -0.02
IRF1-208ENST00000472045 MCTP1Q6DN14 999 aa14.91□□□□□ -0.02
IRF1-208ENST00000472045 NOB1Q9ULX3 412 aaKnown RBP14.91□□□□□ -0.02
IRF1-208ENST00000472045 LMTK3Q96Q04 1460 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms