RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 DDX19BQ9UMR2 479 aa15.26■□□□□ 0.03
VARS2-205ENST00000469358 HMOX1P09601 288 aa15.26■□□□□ 0.03
VARS2-205ENST00000469358 ZBTB40Q9NUA8 1239 aa15.25■□□□□ 0.03
VARS2-205ENST00000469358 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
VARS2-205ENST00000469358 HDAC1Q13547 482 aaPredicted RBP15.24■□□□□ 0.03
VARS2-205ENST00000469358 AAMPQ13685 434 aa15.24■□□□□ 0.03
VARS2-205ENST00000469358 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
VARS2-205ENST00000469358 TRAK2O60296 914 aa15.24■□□□□ 0.03
VARS2-205ENST00000469358 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
VARS2-205ENST00000469358 NEURL4Q96JN8 1562 aa15.23■□□□□ 0.03
VARS2-205ENST00000469358 TSPYL6Q8N831 410 aa15.23■□□□□ 0.03
VARS2-205ENST00000469358 CABP1Q9NZU7 370 aa15.23■□□□□ 0.03
VARS2-205ENST00000469358 GLI2P10070 1586 aa15.23■□□□□ 0.03
VARS2-205ENST00000469358 GOLGA6L3A6NEY3 463 aa15.23■□□□□ 0.03
VARS2-205ENST00000469358 DIAPH1O60610 1272 aaKnown RBP15.23■□□□□ 0.03
VARS2-205ENST00000469358 PHACTR3Q96KR7 559 aa15.23■□□□□ 0.03
VARS2-205ENST00000469358 ZC3H13Q5T200 1668 aaKnown RBP15.23■□□□□ 0.03
VARS2-205ENST00000469358 CD2BP2O95400 341 aaKnown RBP15.22■□□□□ 0.03
VARS2-205ENST00000469358 PRKAR2BP31323 418 aa15.22■□□□□ 0.03
VARS2-205ENST00000469358 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
VARS2-205ENST00000469358 CHMP5Q9NZZ3 219 aa15.22■□□□□ 0.03
VARS2-205ENST00000469358 PPLO60437 1756 aa15.22■□□□□ 0.03
VARS2-205ENST00000469358 ANKRD45Q5TZF3 282 aa15.22■□□□□ 0.03
VARS2-205ENST00000469358 HSCBQ8IWL3 235 aa15.21■□□□□ 0.03
VARS2-205ENST00000469358 FRMPD1Q5SYB0 1578 aa15.21■□□□□ 0.03
VARS2-205ENST00000469358 ABCC11Q96J66 1382 aa15.21■□□□□ 0.02
VARS2-205ENST00000469358 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
VARS2-205ENST00000469358 L1TD1Q5T7N2 865 aaKnown RBP15.2■□□□□ 0.02
VARS2-205ENST00000469358 RPGRIP1LQ68CZ1 1315 aa15.2■□□□□ 0.02
VARS2-205ENST00000469358 NUCB1Q02818 461 aa15.19■□□□□ 0.02
VARS2-205ENST00000469358 FBXO31Q5XUX0 539 aaPredicted RBP15.19■□□□□ 0.02
VARS2-205ENST00000469358 CHD1LQ86WJ1 897 aa15.19■□□□□ 0.02
VARS2-205ENST00000469358 ATAD2Q6PL18 1390 aa15.19■□□□□ 0.02
VARS2-205ENST00000469358 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
VARS2-205ENST00000469358 LMTK2Q8IWU2 1503 aa15.19■□□□□ 0.02
VARS2-205ENST00000469358 ZRANB1Q9UGI0 708 aa15.19■□□□□ 0.02
VARS2-205ENST00000469358 ADGRB2O60241 1585 aa15.19■□□□□ 0.02
VARS2-205ENST00000469358 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
VARS2-205ENST00000469358 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
VARS2-205ENST00000469358 CDK19Q9BWU1 502 aa15.18■□□□□ 0.02
VARS2-205ENST00000469358 TERF2IPQ9NYB0 399 aa15.18■□□□□ 0.02
VARS2-205ENST00000469358 NSD2O96028 1365 aa15.17■□□□□ 0.02
VARS2-205ENST00000469358 FSD2A1L4K1 749 aa15.17■□□□□ 0.02
VARS2-205ENST00000469358 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
VARS2-205ENST00000469358 ABCC3O15438 1527 aa15.17■□□□□ 0.02
VARS2-205ENST00000469358 SIGLEC1Q9BZZ2 1709 aa15.17■□□□□ 0.02
VARS2-205ENST00000469358 CT47B1P0C2W7 299 aaPredicted RBP15.17■□□□□ 0.02
VARS2-205ENST00000469358 TNPO1Q92973 898 aaKnown RBP15.17■□□□□ 0.02
VARS2-205ENST00000469358 EMILIN1Q9Y6C2 1016 aa15.17■□□□□ 0.02
VARS2-205ENST00000469358 HSP90AB1P08238 724 aaKnown RBP15.16■□□□□ 0.02
VARS2-205ENST00000469358 ARHGEF28Q8N1W1 1705 aaKnown RBP15.16■□□□□ 0.02
VARS2-205ENST00000469358 FAM83GA6ND36 823 aa15.16■□□□□ 0.02
VARS2-205ENST00000469358 IPO8O15397 1037 aaKnown RBP15.16■□□□□ 0.02
VARS2-205ENST00000469358 DCTN1Q14203 1278 aa15.16■□□□□ 0.02
VARS2-205ENST00000469358 SIRT2Q8IXJ6 389 aa15.16■□□□□ 0.02
VARS2-205ENST00000469358 POGZQ7Z3K3 1410 aa15.16■□□□□ 0.02
VARS2-205ENST00000469358 KIF2CQ99661 725 aa15.15■□□□□ 0.02
VARS2-205ENST00000469358 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
VARS2-205ENST00000469358 POLKQ9UBT6 870 aa15.15■□□□□ 0.02
VARS2-205ENST00000469358 ZMYM3Q14202 1370 aa15.15■□□□□ 0.02
VARS2-205ENST00000469358 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
VARS2-205ENST00000469358 NCKAP5LQ9HCH0 1330 aa15.15■□□□□ 0.02
VARS2-205ENST00000469358 NEXMIFQ5QGS0 1516 aa15.14■□□□□ 0.01
VARS2-205ENST00000469358 USP32Q8NFA0 1604 aa15.14■□□□□ 0.01
VARS2-205ENST00000469358 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
VARS2-205ENST00000469358 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
VARS2-205ENST00000469358 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
VARS2-205ENST00000469358 GAS2L3Q86XJ1 694 aa15.14■□□□□ 0.01
VARS2-205ENST00000469358 VAMP4O75379 141 aa15.14■□□□□ 0.01
VARS2-205ENST00000469358 HSP90AA1P07900 732 aaKnown RBP15.14■□□□□ 0.01
VARS2-205ENST00000469358 TBC1D9Q6ZT07 1266 aa15.13■□□□□ 0.01
VARS2-205ENST00000469358 HDGFL2Q7Z4V5 671 aaPredicted RBP15.13■□□□□ 0.01
VARS2-205ENST00000469358 APBB1O00213 710 aa15.13■□□□□ 0.01
VARS2-205ENST00000469358 RBM25P49756 843 aaKnown RBP15.13■□□□□ 0.01
VARS2-205ENST00000469358 C8orf58Q8NAV2 365 aa15.12■□□□□ 0.01
VARS2-205ENST00000469358 IL16Q14005 1332 aa15.12■□□□□ 0.01
VARS2-205ENST00000469358 KRT24Q2M2I5 525 aa15.12■□□□□ 0.01
VARS2-205ENST00000469358 C16orf71Q8IYS4 520 aaPredicted RBP15.12■□□□□ 0.01
VARS2-205ENST00000469358 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
VARS2-205ENST00000469358 PUS7Q96PZ0 661 aaKnown RBP15.12■□□□□ 0.01
VARS2-205ENST00000469358 MBIPQ9NS73 344 aa15.12■□□□□ 0.01
VARS2-205ENST00000469358 DDIT3P35638 169 aa15.11■□□□□ 0.01
VARS2-205ENST00000469358 NME9Q86XW9 330 aa15.11■□□□□ 0.01
VARS2-205ENST00000469358 RRS1Q15050 365 aaKnown RBP15.11■□□□□ 0.01
VARS2-205ENST00000469358 FCHSD2O94868 740 aa15.11■□□□□ 0.01
VARS2-205ENST00000469358 GRPEL1Q9HAV7 217 aa15.11■□□□□ 0.01
VARS2-205ENST00000469358 STAG3Q9UJ98 1225 aa15.11■□□□□ 0.01
VARS2-205ENST00000469358 HECW2Q9P2P5 1572 aa15.1■□□□□ 0.01
VARS2-205ENST00000469358 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
VARS2-205ENST00000469358 SSFA2P28290 1259 aa15.1■□□□□ 0.01
VARS2-205ENST00000469358 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
VARS2-205ENST00000469358 GAS2L2Q8NHY3 880 aa15.1■□□□□ 0.01
VARS2-205ENST00000469358 NAP1L5Q96NT1 182 aaPredicted RBP15.1■□□□□ 0.01
VARS2-205ENST00000469358 ALDH1L2Q3SY69 923 aa15.1■□□□□ 0.01
VARS2-205ENST00000469358 BMP2KLQ5H9B9 411 aa15.1■□□□□ 0.01
VARS2-205ENST00000469358 PTPRMP28827 1452 aa15.1■□□□□ 0.01
VARS2-205ENST00000469358 LRRC7Q96NW7 1537 aa15.1■□□□□ 0.01
VARS2-205ENST00000469358 OTUD7AQ8TE49 926 aaPredicted RBP15.09■□□□□ 0.01
VARS2-205ENST00000469358 MLH3Q9UHC1 1453 aa15.09■□□□□ 0.01
VARS2-205ENST00000469358 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms