RNA–Protein interactions for RNA: ENST00000468915.5

SLC13A3-209, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-209ENST00000468915 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
SLC13A3-209ENST00000468915 SOS2Q07890 1332 aaPredicted RBP20.45■□□□□ 0.86
SLC13A3-209ENST00000468915 NPHP3Q7Z494 1330 aa20.44■□□□□ 0.86
SLC13A3-209ENST00000468915 KRT28Q7Z3Y7 464 aa20.43■□□□□ 0.86
SLC13A3-209ENST00000468915 USP54Q70EL1 1684 aa20.43■□□□□ 0.86
SLC13A3-209ENST00000468915 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
SLC13A3-209ENST00000468915 ANKRD26Q9UPS8 1709 aa20.42■□□□□ 0.86
SLC13A3-209ENST00000468915 NPC1L1Q9UHC9 1359 aa20.42■□□□□ 0.86
SLC13A3-209ENST00000468915 FYB1O15117 783 aa20.42■□□□□ 0.86
SLC13A3-209ENST00000468915 PIP4K2BP78356 416 aa20.42■□□□□ 0.86
SLC13A3-209ENST00000468915 PSME1Q06323 249 aa20.42■□□□□ 0.86
SLC13A3-209ENST00000468915 COL16A1Q07092 1604 aaPredicted RBP20.41■□□□□ 0.86
SLC13A3-209ENST00000468915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.41■□□□□ 0.863e-7■■□□□ 14.3
SLC13A3-209ENST00000468915 ZRANB1Q9UGI0 708 aa20.41■□□□□ 0.86
SLC13A3-209ENST00000468915 SBNO1A3KN83 1393 aa20.4■□□□□ 0.86
SLC13A3-209ENST00000468915 NME9Q86XW9 330 aa20.4■□□□□ 0.86
SLC13A3-209ENST00000468915 KNSTRNQ9Y448 316 aa20.4■□□□□ 0.86
SLC13A3-209ENST00000468915 PHLPP1O60346 1717 aa20.39■□□□□ 0.85
SLC13A3-209ENST00000468915 TTC21AQ8NDW8 1320 aa20.39■□□□□ 0.85
SLC13A3-209ENST00000468915 CRYBG1Q9Y4K1 1723 aa20.38■□□□□ 0.85
SLC13A3-209ENST00000468915 OVOS2A0A0J9YW53 1432 aa20.37■□□□□ 0.85
SLC13A3-209ENST00000468915 OVOS2Q6IE36 1432 aa20.37■□□□□ 0.85
SLC13A3-209ENST00000468915 USP31Q70CQ4 1352 aa20.37■□□□□ 0.85
SLC13A3-209ENST00000468915 CGNL1Q0VF96 1302 aa20.37■□□□□ 0.85
SLC13A3-209ENST00000468915 SPATA31A3Q5VYP0 1347 aa20.37■□□□□ 0.85
SLC13A3-209ENST00000468915 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
SLC13A3-209ENST00000468915 TNS3Q68CZ2 1445 aa20.37■□□□□ 0.85
SLC13A3-209ENST00000468915 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
SLC13A3-209ENST00000468915 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
SLC13A3-209ENST00000468915 NSD2O96028 1365 aa20.34■□□□□ 0.85
SLC13A3-209ENST00000468915 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
SLC13A3-209ENST00000468915 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
SLC13A3-209ENST00000468915 PAK3O75914 559 aaPredicted RBP20.34■□□□□ 0.85
SLC13A3-209ENST00000468915 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
SLC13A3-209ENST00000468915 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
SLC13A3-209ENST00000468915 SLIT3O75094 1523 aa20.31■□□□□ 0.84
SLC13A3-209ENST00000468915 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
SLC13A3-209ENST00000468915 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
SLC13A3-209ENST00000468915 ABCA3Q99758 1704 aa20.31■□□□□ 0.84
SLC13A3-209ENST00000468915 USP19O94966 1318 aa20.3■□□□□ 0.84
SLC13A3-209ENST00000468915 COL22A1Q8NFW1 1626 aaPredicted RBP20.3■□□□□ 0.84
SLC13A3-209ENST00000468915 PHRF1Q9P1Y6 1649 aaKnown RBP20.3■□□□□ 0.84
SLC13A3-209ENST00000468915 CNGB1Q14028 1251 aaPredicted RBP20.29■□□□□ 0.84
SLC13A3-209ENST00000468915 NLRP6P59044 892 aa20.29■□□□□ 0.84
SLC13A3-209ENST00000468915 NFAT5O94916 1531 aa20.28■□□□□ 0.84
SLC13A3-209ENST00000468915 FBLN1P23142 703 aa20.28■□□□□ 0.84
SLC13A3-209ENST00000468915 ARHGEF10O15013 1369 aa20.28■□□□□ 0.84
SLC13A3-209ENST00000468915 PNPLA6Q8IY17 1366 aa20.28■□□□□ 0.84
SLC13A3-209ENST00000468915 LRRC59Q96AG4 307 aaKnown RBP20.27■□□□□ 0.84
SLC13A3-209ENST00000468915 HSPA1LP34931 641 aa20.26■□□□□ 0.83
SLC13A3-209ENST00000468915 MAP2P11137 1827 aaKnown RBP20.26■□□□□ 0.83
SLC13A3-209ENST00000468915 SHPRHQ149N8 1683 aa20.25■□□□□ 0.83
SLC13A3-209ENST00000468915 COG3Q96JB2 828 aa20.25■□□□□ 0.83
SLC13A3-209ENST00000468915 LMOD2Q6P5Q4 547 aa20.25■□□□□ 0.83
SLC13A3-209ENST00000468915 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
SLC13A3-209ENST00000468915 NLRP13Q86W25 1043 aa20.25■□□□□ 0.83
SLC13A3-209ENST00000468915 CABLES1Q8TDN4 633 aa20.24■□□□□ 0.83
SLC13A3-209ENST00000468915 RALBP1Q15311 655 aa20.23■□□□□ 0.83
SLC13A3-209ENST00000468915 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
SLC13A3-209ENST00000468915 AATKQ6ZMQ8 1374 aa20.22■□□□□ 0.83
SLC13A3-209ENST00000468915 PPP2R1AP30153 589 aa20.21■□□□□ 0.83
SLC13A3-209ENST00000468915 TNNT2P45379 298 aaPredicted RBP20.21■□□□□ 0.83
SLC13A3-209ENST00000468915 MIER1Q8N108 512 aa20.21■□□□□ 0.83
SLC13A3-209ENST00000468915 LTN1O94822 1766 aa20.21■□□□□ 0.83
SLC13A3-209ENST00000468915 ANP32CO43423 234 aa20.21■□□□□ 0.83
SLC13A3-209ENST00000468915 GCP02774 474 aa20.21■□□□□ 0.83
SLC13A3-209ENST00000468915 SMG6Q86US8 1419 aaKnown RBP20.2■□□□□ 0.82
SLC13A3-209ENST00000468915 FBXO41Q8TF61 875 aa20.2■□□□□ 0.82
SLC13A3-209ENST00000468915 COL18A1P39060 1754 aa20.18■□□□□ 0.82
SLC13A3-209ENST00000468915 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
SLC13A3-209ENST00000468915 POLKQ9UBT6 870 aa20.18■□□□□ 0.82
SLC13A3-209ENST00000468915 JCADQ9P266 1359 aa20.18■□□□□ 0.82
SLC13A3-209ENST00000468915 MYBBP1AQ9BQG0 1328 aaKnown RBP20.18■□□□□ 0.82
SLC13A3-209ENST00000468915 RRS1Q15050 365 aaKnown RBP20.17■□□□□ 0.82
SLC13A3-209ENST00000468915 CCDC184Q52MB2 194 aa20.17■□□□□ 0.82
SLC13A3-209ENST00000468915 SOX12O15370 315 aa20.17■□□□□ 0.82
SLC13A3-209ENST00000468915 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
SLC13A3-209ENST00000468915 MAP3K19Q56UN5 1328 aa20.16■□□□□ 0.82
SLC13A3-209ENST00000468915 ARHGEF25Q86VW2 580 aa20.16■□□□□ 0.82
SLC13A3-209ENST00000468915 KCNH5Q8NCM2 988 aa20.15■□□□□ 0.82
SLC13A3-209ENST00000468915 COL3A1P02461 1466 aaPredicted RBP20.15■□□□□ 0.82
SLC13A3-209ENST00000468915 MTHFSP49914 203 aa20.14■□□□□ 0.81
SLC13A3-209ENST00000468915 CPDO75976 1380 aa20.14■□□□□ 0.81
SLC13A3-209ENST00000468915 RGPD5Q99666 1765 aa20.13■□□□□ 0.81
SLC13A3-209ENST00000468915 LRP6O75581 1613 aa20.13■□□□□ 0.81
SLC13A3-209ENST00000468915 LMO7Q8WWI1 1683 aa20.13■□□□□ 0.81
SLC13A3-209ENST00000468915 CDK12Q9NYV4 1490 aaPredicted RBP20.12■□□□□ 0.81
SLC13A3-209ENST00000468915 INSRP06213 1382 aa20.12■□□□□ 0.81
SLC13A3-209ENST00000468915 KIAA0232Q92628 1395 aa20.12■□□□□ 0.81
SLC13A3-209ENST00000468915 ZC3H6P61129 1189 aaKnown RBP20.12■□□□□ 0.81
SLC13A3-209ENST00000468915 KIF24Q5T7B8 1368 aa20.09■□□□□ 0.81
SLC13A3-209ENST00000468915 AXIN2Q9Y2T1 843 aa20.08■□□□□ 0.81
SLC13A3-209ENST00000468915 ABCC6O95255 1503 aa20.08■□□□□ 0.81
SLC13A3-209ENST00000468915 HOXC9P31274 260 aa20.08■□□□□ 0.8
SLC13A3-209ENST00000468915 HSP90AB2PQ58FF8 381 aa20.08■□□□□ 0.8
SLC13A3-209ENST00000468915 CAMTA1Q9Y6Y1 1673 aa20.08■□□□□ 0.8
SLC13A3-209ENST00000468915 SPATA31A6Q5VVP1 1343 aa20.07■□□□□ 0.8
SLC13A3-209ENST00000468915 RTL1A6NKG5 1358 aa20.07■□□□□ 0.8
SLC13A3-209ENST00000468915 FLT4P35916 1363 aa20.07■□□□□ 0.8
SLC13A3-209ENST00000468915 CHRNA2Q15822 529 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms