RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
CTNNB1-211ENST00000465552 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
CTNNB1-211ENST00000465552 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
CTNNB1-211ENST00000465552 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
CTNNB1-211ENST00000465552 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
CTNNB1-211ENST00000465552 PPIP5K1Q6PFW1 1433 aa14.12□□□□□ -0.15
CTNNB1-211ENST00000465552 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
CTNNB1-211ENST00000465552 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.1□□□□□ -0.15
CTNNB1-211ENST00000465552 PSME1Q06323 249 aa14.1□□□□□ -0.15
CTNNB1-211ENST00000465552 LMOD2Q6P5Q4 547 aa14.1□□□□□ -0.15
CTNNB1-211ENST00000465552 POTEHQ6S545 545 aa14.1□□□□□ -0.15
CTNNB1-211ENST00000465552 NGDNQ8NEJ9 315 aaKnown RBP14.1□□□□□ -0.15
CTNNB1-211ENST00000465552 PIK3C2AO00443 1686 aa14.1□□□□□ -0.15
CTNNB1-211ENST00000465552 ADAMTS2O95450 1211 aa14.09□□□□□ -0.15
CTNNB1-211ENST00000465552 RGS17Q9UGC6 210 aaPredicted RBP14.09□□□□□ -0.15
CTNNB1-211ENST00000465552 SPATA31A3Q5VYP0 1347 aa14.09□□□□□ -0.15
CTNNB1-211ENST00000465552 MYOM1P52179 1685 aa14.08□□□□□ -0.16
CTNNB1-211ENST00000465552 NRAPQ86VF7 1730 aa14.08□□□□□ -0.16
CTNNB1-211ENST00000465552 NWD2Q9ULI1 1742 aa14.08□□□□□ -0.16
CTNNB1-211ENST00000465552 EVC2Q86UK5 1308 aa14.08□□□□□ -0.16
CTNNB1-211ENST00000465552 RGPD5Q99666 1765 aa14.07□□□□□ -0.16
CTNNB1-211ENST00000465552 C8orf37Q96NL8 207 aa14.07□□□□□ -0.16
CTNNB1-211ENST00000465552 SBNO1A3KN83 1393 aa14.07□□□□□ -0.16
CTNNB1-211ENST00000465552 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
CTNNB1-211ENST00000465552 ACEP12821 1306 aa14.06□□□□□ -0.16
CTNNB1-211ENST00000465552 USP47Q96K76 1375 aa14.06□□□□□ -0.16
CTNNB1-211ENST00000465552 COL14A1Q05707 1796 aaKnown RBP14.05□□□□□ -0.16
CTNNB1-211ENST00000465552 CABLES1Q8TDN4 633 aa14.05□□□□□ -0.16
CTNNB1-211ENST00000465552 KIF20BQ96Q89 1820 aa14.05□□□□□ -0.16
CTNNB1-211ENST00000465552 AFF2P51816 1311 aa14.05□□□□□ -0.16
CTNNB1-211ENST00000465552 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
CTNNB1-211ENST00000465552 SBNO2Q9Y2G9 1366 aa14.05□□□□□ -0.16
CTNNB1-211ENST00000465552 LTN1O94822 1766 aa14.04□□□□□ -0.16
CTNNB1-211ENST00000465552 HAP1P54257 671 aaPredicted RBP14.04□□□□□ -0.16
CTNNB1-211ENST00000465552 POLA2Q14181 598 aa14.04□□□□□ -0.16
CTNNB1-211ENST00000465552 POTEAQ6S8J7 498 aa14.04□□□□□ -0.16
CTNNB1-211ENST00000465552 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
CTNNB1-211ENST00000465552 ARHGEF10O15013 1369 aa14.04□□□□□ -0.16
CTNNB1-211ENST00000465552 BRWD3Q6RI45 1802 aa14.04□□□□□ -0.16
CTNNB1-211ENST00000465552 ST20-MTHFSA0A0A6YYL1 179 aa14.02□□□□□ -0.17
CTNNB1-211ENST00000465552 NUTM2GQ5VZR2 741 aa14.02□□□□□ -0.17
CTNNB1-211ENST00000465552 USP6P35125 1406 aa14.01□□□□□ -0.17
CTNNB1-211ENST00000465552 ATAD2Q6PL18 1390 aa14.01□□□□□ -0.17
CTNNB1-211ENST00000465552 NGLY1Q96IV0 654 aa14.01□□□□□ -0.17
CTNNB1-211ENST00000465552 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
CTNNB1-211ENST00000465552 CABP1Q9NZU7 370 aa14.01□□□□□ -0.17
CTNNB1-211ENST00000465552 TIMELESSQ9UNS1 1208 aa14.01□□□□□ -0.17
CTNNB1-211ENST00000465552 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
CTNNB1-211ENST00000465552 PLEKHG3A1L390 1219 aa14□□□□□ -0.17
CTNNB1-211ENST00000465552 CD163L1Q9NR16 1453 aa13.99□□□□□ -0.17
CTNNB1-211ENST00000465552 ZNF772Q68DY9 489 aaPredicted RBP13.98□□□□□ -0.17
CTNNB1-211ENST00000465552 TESK2Q96S53 571 aa13.98□□□□□ -0.17
CTNNB1-211ENST00000465552 WNK3Q9BYP7 1800 aa13.97□□□□□ -0.17
CTNNB1-211ENST00000465552 GLI3P10071 1580 aa13.97□□□□□ -0.17
CTNNB1-211ENST00000465552 TMC1Q8TDI8 760 aa13.97□□□□□ -0.17
CTNNB1-211ENST00000465552 SLIT3O75094 1523 aa13.96□□□□□ -0.17
CTNNB1-211ENST00000465552 SLIT2O94813 1529 aa13.96□□□□□ -0.17
CTNNB1-211ENST00000465552 LMO7Q8WWI1 1683 aa13.96□□□□□ -0.17
CTNNB1-211ENST00000465552 USP21Q9UK80 565 aa13.96□□□□□ -0.17
CTNNB1-211ENST00000465552 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.18
CTNNB1-211ENST00000465552 BCL9LQ86UU0 1499 aa13.95□□□□□ -0.18
CTNNB1-211ENST00000465552 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
CTNNB1-211ENST00000465552 COL18A1P39060 1754 aa13.95□□□□□ -0.18
CTNNB1-211ENST00000465552 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
CTNNB1-211ENST00000465552 RGS12O14924 1447 aa13.94□□□□□ -0.18
CTNNB1-211ENST00000465552 ATF5Q9Y2D1 282 aaPredicted RBP13.94□□□□□ -0.18
CTNNB1-211ENST00000465552 A0A1W2PP64 1363 aa13.94□□□□□ -0.18
CTNNB1-211ENST00000465552 ANKRD26Q9UPS8 1709 aa13.93□□□□□ -0.18
CTNNB1-211ENST00000465552 ATRNO75882 1429 aa13.93□□□□□ -0.18
CTNNB1-211ENST00000465552 SSH2Q76I76 1423 aa13.93□□□□□ -0.18
CTNNB1-211ENST00000465552 RGPD2P0DJD1 1756 aa13.92□□□□□ -0.18
CTNNB1-211ENST00000465552 TMF1P82094 1093 aa13.92□□□□□ -0.18
CTNNB1-211ENST00000465552 SLC12A5Q9H2X9 1139 aa13.92□□□□□ -0.18
CTNNB1-211ENST00000465552 QTRT2Q9H974 415 aaKnown RBP13.92□□□□□ -0.18
CTNNB1-211ENST00000465552 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
CTNNB1-211ENST00000465552 TTC21BQ7Z4L5 1316 aa13.91□□□□□ -0.18
CTNNB1-211ENST00000465552 ZBTB7CA1YPR0 619 aa13.91□□□□□ -0.18
CTNNB1-211ENST00000465552 RXRBP28702 533 aa13.91□□□□□ -0.18
CTNNB1-211ENST00000465552 ZC3H6P61129 1189 aaKnown RBP13.91□□□□□ -0.18
CTNNB1-211ENST00000465552 FNBP4Q8N3X1 1017 aaPredicted RBP13.91□□□□□ -0.18
CTNNB1-211ENST00000465552 POLR3GLQ9BT43 218 aa13.91□□□□□ -0.18
CTNNB1-211ENST00000465552 BRD4O60885 1362 aaPredicted RBP13.91□□□□□ -0.18
CTNNB1-211ENST00000465552 USP19O94966 1318 aa13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 SOCS7O14512 581 aa13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 SOX12O15370 315 aa13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 NLRP6P59044 892 aa13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 CHRNA2Q15822 529 aa13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 TRPC5Q9UL62 973 aaPredicted RBP13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 MAP2P11137 1827 aaKnown RBP13.9□□□□□ -0.18
CTNNB1-211ENST00000465552 NFAT5O94916 1531 aa13.9□□□□□ -0.19
CTNNB1-211ENST00000465552 CDK12Q9NYV4 1490 aaPredicted RBP13.89□□□□□ -0.19
CTNNB1-211ENST00000465552 FAM83GA6ND36 823 aa13.89□□□□□ -0.19
CTNNB1-211ENST00000465552 HDGFL2Q7Z4V5 671 aaPredicted RBP13.89□□□□□ -0.19
CTNNB1-211ENST00000465552 NLRP13Q86W25 1043 aa13.89□□□□□ -0.19
CTNNB1-211ENST00000465552 PRDM11Q9NQV5 511 aa13.89□□□□□ -0.19
CTNNB1-211ENST00000465552 EDC4Q6P2E9 1401 aaKnown RBP13.89□□□□□ -0.19
CTNNB1-211ENST00000465552 CAMTA1Q9Y6Y1 1673 aa13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 ZBTB22O15209 634 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms