RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 LTKP29376 864 aa11.33□□□□□ -0.6
RPA3-205ENST00000462723 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
RPA3-205ENST00000462723 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
RPA3-205ENST00000462723 QRICH2Q9H0J4 1663 aa11.33□□□□□ -0.6
RPA3-205ENST00000462723 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
RPA3-205ENST00000462723 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
RPA3-205ENST00000462723 STK26Q9P289 416 aa11.32□□□□□ -0.6
RPA3-205ENST00000462723 LRPPRCP42704 1394 aaKnown RBP11.31□□□□□ -0.6
RPA3-205ENST00000462723 DISP3Q9P2K9 1392 aa11.31□□□□□ -0.6
RPA3-205ENST00000462723 ANKLE2Q86XL3 938 aa11.31□□□□□ -0.6
RPA3-205ENST00000462723 DLC1Q96QB1 1528 aa11.3□□□□□ -0.6
RPA3-205ENST00000462723 DIP2AQ14689 1571 aa11.3□□□□□ -0.6
RPA3-205ENST00000462723 ADAMTS13Q76LX8 1427 aa11.3□□□□□ -0.6
RPA3-205ENST00000462723 METP08581 1390 aa11.29□□□□□ -0.6
RPA3-205ENST00000462723 ABCC11Q96J66 1382 aa11.29□□□□□ -0.6
RPA3-205ENST00000462723 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
RPA3-205ENST00000462723 POGKQ9P215 609 aa11.29□□□□□ -0.6
RPA3-205ENST00000462723 MED14O60244 1454 aa11.29□□□□□ -0.6
RPA3-205ENST00000462723 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
RPA3-205ENST00000462723 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
RPA3-205ENST00000462723 TBX22Q9Y458 520 aa11.28□□□□□ -0.6
RPA3-205ENST00000462723 ANP32CO43423 234 aa11.27□□□□□ -0.61
RPA3-205ENST00000462723 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
RPA3-205ENST00000462723 PRAM1Q96QH2 718 aa11.27□□□□□ -0.61
RPA3-205ENST00000462723 SLC26A8Q96RN1 970 aa11.27□□□□□ -0.61
RPA3-205ENST00000462723 TECPR2O15040 1411 aa11.26□□□□□ -0.61
RPA3-205ENST00000462723 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
RPA3-205ENST00000462723 SIRT1Q96EB6 747 aa11.26□□□□□ -0.61
RPA3-205ENST00000462723 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
RPA3-205ENST00000462723 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
RPA3-205ENST00000462723 CPS1P31327 1500 aa11.25□□□□□ -0.61
RPA3-205ENST00000462723 SAFB2Q14151 953 aaKnown RBP eCLIP11.25□□□□□ -0.61
RPA3-205ENST00000462723 PUS7Q96PZ0 661 aaKnown RBP11.24□□□□□ -0.61
RPA3-205ENST00000462723 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
RPA3-205ENST00000462723 NPHP4O75161 1426 aaPredicted RBP11.24□□□□□ -0.61
RPA3-205ENST00000462723 MINK1Q8N4C8 1332 aaPredicted RBP11.23□□□□□ -0.61
RPA3-205ENST00000462723 TULP4Q9NRJ4 1543 aa11.23□□□□□ -0.61
RPA3-205ENST00000462723 MYOM1P52179 1685 aa11.23□□□□□ -0.61
RPA3-205ENST00000462723 WAPLQ7Z5K2 1190 aa11.22□□□□□ -0.61
RPA3-205ENST00000462723 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
RPA3-205ENST00000462723 AMOTL2Q9Y2J4 779 aa11.22□□□□□ -0.61
RPA3-205ENST00000462723 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.61
RPA3-205ENST00000462723 PTCH1Q13635 1447 aa11.21□□□□□ -0.61
RPA3-205ENST00000462723 PTPRUQ92729 1446 aa11.21□□□□□ -0.61
RPA3-205ENST00000462723 ROBO2Q9HCK4 1378 aa11.21□□□□□ -0.61
RPA3-205ENST00000462723 PLEKHH1Q9ULM0 1364 aa11.2□□□□□ -0.62
RPA3-205ENST00000462723 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
RPA3-205ENST00000462723 PYGBP11216 843 aa11.2□□□□□ -0.62
RPA3-205ENST00000462723 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
RPA3-205ENST00000462723 L3MBTL3Q96JM7 780 aaPredicted RBP11.2□□□□□ -0.62
RPA3-205ENST00000462723 PANK3Q9H999 370 aa11.2□□□□□ -0.62
RPA3-205ENST00000462723 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
RPA3-205ENST00000462723 CHD2O14647 1828 aaKnown RBP11.2□□□□□ -0.62
RPA3-205ENST00000462723 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
RPA3-205ENST00000462723 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
RPA3-205ENST00000462723 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
RPA3-205ENST00000462723 NINLQ9Y2I6 1382 aa11.18□□□□□ -0.62
RPA3-205ENST00000462723 CCER2I3L3R5 266 aa11.18□□□□□ -0.62
RPA3-205ENST00000462723 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
RPA3-205ENST00000462723 CDK19Q9BWU1 502 aa11.18□□□□□ -0.62
RPA3-205ENST00000462723 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
RPA3-205ENST00000462723 ADGRB2O60241 1585 aa11.17□□□□□ -0.62
RPA3-205ENST00000462723 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
RPA3-205ENST00000462723 KNSTRNQ9Y448 316 aa11.17□□□□□ -0.62
RPA3-205ENST00000462723 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.16□□□□□ -0.62
RPA3-205ENST00000462723 WASLO00401 505 aaPredicted RBP11.16□□□□□ -0.62
RPA3-205ENST00000462723 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
RPA3-205ENST00000462723 KCNA6P17658 529 aa11.16□□□□□ -0.62
RPA3-205ENST00000462723 HSPA2P54652 639 aa11.16□□□□□ -0.62
RPA3-205ENST00000462723 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
RPA3-205ENST00000462723 RALBP1Q15311 655 aa11.14□□□□□ -0.63
RPA3-205ENST00000462723 SLC12A5Q9H2X9 1139 aa11.14□□□□□ -0.63
RPA3-205ENST00000462723 NWD1Q149M9 1564 aa11.14□□□□□ -0.63
RPA3-205ENST00000462723 ANKRD36BQ8N2N9 1353 aa11.14□□□□□ -0.63
RPA3-205ENST00000462723 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
RPA3-205ENST00000462723 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
RPA3-205ENST00000462723 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
RPA3-205ENST00000462723 NPC1L1Q9UHC9 1359 aa11.13□□□□□ -0.63
RPA3-205ENST00000462723 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
RPA3-205ENST00000462723 HDGFL2Q7Z4V5 671 aaPredicted RBP11.12□□□□□ -0.63
RPA3-205ENST00000462723 NUDT16Q96DE0 195 aaKnown RBP11.12□□□□□ -0.63
RPA3-205ENST00000462723 STRCQ7RTU9 1775 aa11.12□□□□□ -0.63
RPA3-205ENST00000462723 NKTRP30414 1462 aaKnown RBP11.12□□□□□ -0.63
RPA3-205ENST00000462723 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
RPA3-205ENST00000462723 USP32Q8NFA0 1604 aa11.11□□□□□ -0.63
RPA3-205ENST00000462723 CC2D1BQ5T0F9 858 aaKnown RBP11.11□□□□□ -0.63
RPA3-205ENST00000462723 CARD14Q9BXL6 1004 aa11.11□□□□□ -0.63
RPA3-205ENST00000462723 PARD3Q8TEW0 1356 aa11.11□□□□□ -0.63
RPA3-205ENST00000462723 ATP7BP35670 1465 aa11.11□□□□□ -0.63
RPA3-205ENST00000462723 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
RPA3-205ENST00000462723 ITSN1Q15811 1721 aa11.1□□□□□ -0.63
RPA3-205ENST00000462723 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
RPA3-205ENST00000462723 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
RPA3-205ENST00000462723 CABP1Q9NZU7 370 aa11.1□□□□□ -0.63
RPA3-205ENST00000462723 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
RPA3-205ENST00000462723 MYBBP1AQ9BQG0 1328 aaKnown RBP11.09□□□□□ -0.63
RPA3-205ENST00000462723 NALCNQ8IZF0 1738 aa11.09□□□□□ -0.63
RPA3-205ENST00000462723 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
RPA3-205ENST00000462723 CDC42BPGQ6DT37 1551 aa11.09□□□□□ -0.63
RPA3-205ENST00000462723 A0A1W2PP64 1363 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms