RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 TRIM35Q9UPQ4 493 aa26.5■■□□□ 1.83
CRAT-207ENST00000458362 NFKBIBQ15653 356 aa26.48■■□□□ 1.83
CRAT-207ENST00000458362 EXOSC9Q06265 439 aaKnown RBP26.47■■□□□ 1.83
CRAT-207ENST00000458362 CDK19Q9BWU1 502 aa26.47■■□□□ 1.83
CRAT-207ENST00000458362 ARHGEF40Q8TER5 1519 aa26.47■■□□□ 1.83
CRAT-207ENST00000458362 KIF20BQ96Q89 1820 aa26.46■■□□□ 1.83
CRAT-207ENST00000458362 MVPQ14764 893 aaKnown RBP26.46■■□□□ 1.83
CRAT-207ENST00000458362 PDZRN3Q9UPQ7 1066 aa26.46■■□□□ 1.83
CRAT-207ENST00000458362 ZKSCAN2Q63HK3 967 aa26.46■■□□□ 1.83
CRAT-207ENST00000458362 CT47B1P0C2W7 299 aaPredicted RBP26.43■■□□□ 1.82
CRAT-207ENST00000458362 CABP1Q9NZU7 370 aa26.43■■□□□ 1.82
CRAT-207ENST00000458362 HDGFL2Q7Z4V5 671 aaPredicted RBP26.42■■□□□ 1.82
CRAT-207ENST00000458362 DZIP1LQ8IYY4 767 aaKnown RBP26.42■■□□□ 1.82
CRAT-207ENST00000458362 RWDD1Q9H446 243 aaPredicted RBP26.42■■□□□ 1.82
CRAT-207ENST00000458362 REREQ9P2R6 1566 aa26.42■■□□□ 1.82
CRAT-207ENST00000458362 SMC4Q9NTJ3 1288 aa26.41■■□□□ 1.82
CRAT-207ENST00000458362 PNPLA6Q8IY17 1366 aa26.41■■□□□ 1.82
CRAT-207ENST00000458362 PPP6R1Q9UPN7 881 aa26.41■■□□□ 1.82
CRAT-207ENST00000458362 DIAPH1O60610 1272 aaKnown RBP26.4■■□□□ 1.82
CRAT-207ENST00000458362 SSH1Q8WYL5 1049 aa26.4■■□□□ 1.82
CRAT-207ENST00000458362 FTSJ3Q8IY81 847 aaKnown RBP26.4■■□□□ 1.82
CRAT-207ENST00000458362 CYB5RLQ6IPT4 315 aa26.39■■□□□ 1.82
CRAT-207ENST00000458362 STAG3Q9UJ98 1225 aa26.39■■□□□ 1.82
CRAT-207ENST00000458362 AGLP35573 1532 aa26.39■■□□□ 1.82
CRAT-207ENST00000458362 RIPK4P57078 832 aa26.39■■□□□ 1.81
CRAT-207ENST00000458362 IL16Q14005 1332 aa26.38■■□□□ 1.81
CRAT-207ENST00000458362 TRIM27P14373 513 aa26.38■■□□□ 1.81
CRAT-207ENST00000458362 DIP2BQ9P265 1576 aa26.37■■□□□ 1.81
CRAT-207ENST00000458362 ZMYM3Q14202 1370 aa26.36■■□□□ 1.81
CRAT-207ENST00000458362 WAPLQ7Z5K2 1190 aa26.36■■□□□ 1.81
CRAT-207ENST00000458362 SETD1AO15047 1707 aaKnown RBP26.36■■□□□ 1.81
CRAT-207ENST00000458362 FBLN1P23142 703 aa26.36■■□□□ 1.81
CRAT-207ENST00000458362 LRRC7Q96NW7 1537 aa26.35■■□□□ 1.81
CRAT-207ENST00000458362 CDC42BPGQ6DT37 1551 aa26.35■■□□□ 1.81
CRAT-207ENST00000458362 A2ML1A8K2U0 1454 aa26.35■■□□□ 1.81
CRAT-207ENST00000458362 TSPOAP1O95153 1857 aa26.35■■□□□ 1.81
CRAT-207ENST00000458362 DLC1Q96QB1 1528 aa26.34■■□□□ 1.81
CRAT-207ENST00000458362 FAM69CQ0P6D2 419 aa26.34■■□□□ 1.81
CRAT-207ENST00000458362 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.34■■□□□ 1.81
CRAT-207ENST00000458362 RIMBP3CA6NJZ7 1639 aa26.34■■□□□ 1.81
CRAT-207ENST00000458362 RIMBP3BA6NNM3 1639 aa26.34■■□□□ 1.81
CRAT-207ENST00000458362 RIMBP3Q9UFD9 1639 aa26.34■■□□□ 1.81
CRAT-207ENST00000458362 NOB1Q9ULX3 412 aaKnown RBP26.34■■□□□ 1.81
CRAT-207ENST00000458362 ATF7IPQ6VMQ6 1270 aa26.32■■□□□ 1.8
CRAT-207ENST00000458362 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
CRAT-207ENST00000458362 ITPRIPQ8IWB1 547 aa26.31■■□□□ 1.8
CRAT-207ENST00000458362 POLKQ9UBT6 870 aa26.31■■□□□ 1.8
CRAT-207ENST00000458362 FRAT2O75474 233 aaPredicted RBP26.3■■□□□ 1.8
CRAT-207ENST00000458362 ATP7BP35670 1465 aa26.3■■□□□ 1.8
CRAT-207ENST00000458362 SPATA31D1Q6ZQQ2 1576 aa26.3■■□□□ 1.8
CRAT-207ENST00000458362 MAP2P11137 1827 aaKnown RBP26.29■■□□□ 1.8
CRAT-207ENST00000458362 FAM135BQ49AJ0 1406 aa26.29■■□□□ 1.8
CRAT-207ENST00000458362 FCHSD2O94868 740 aa26.29■■□□□ 1.8
CRAT-207ENST00000458362 RSPH6AQ9H0K4 717 aa26.29■■□□□ 1.8
CRAT-207ENST00000458362 PNNQ9H307 717 aaKnown RBP26.29■■□□□ 1.8
CRAT-207ENST00000458362 PRKAR2BP31323 418 aa26.28■■□□□ 1.8
CRAT-207ENST00000458362 GSE1Q14687 1217 aa26.28■■□□□ 1.8
CRAT-207ENST00000458362 TMEM57Q8N5G2 664 aa26.28■■□□□ 1.8
CRAT-207ENST00000458362 DDX19BQ9UMR2 479 aa26.28■■□□□ 1.8
CRAT-207ENST00000458362 TBC1D32Q96NH3 1257 aa26.27■■□□□ 1.8
CRAT-207ENST00000458362 HDAC1Q13547 482 aaPredicted RBP26.27■■□□□ 1.8
CRAT-207ENST00000458362 NRXN3Q9Y4C0 1643 aa26.25■■□□□ 1.79
CRAT-207ENST00000458362 BECN1Q14457 450 aa26.23■■□□□ 1.79
CRAT-207ENST00000458362 PHACTR3Q96KR7 559 aa26.23■■□□□ 1.79
CRAT-207ENST00000458362 MLECQ14165 292 aa26.22■■□□□ 1.79
CRAT-207ENST00000458362 ZBTB40Q9NUA8 1239 aa26.22■■□□□ 1.79
CRAT-207ENST00000458362 KIF16BQ96L93 1317 aa26.22■■□□□ 1.79
CRAT-207ENST00000458362 HMOX1P09601 288 aa26.22■■□□□ 1.79
CRAT-207ENST00000458362 UPF2Q9HAU5 1272 aaKnown RBP26.22■■□□□ 1.79
CRAT-207ENST00000458362 EMILIN1Q9Y6C2 1016 aa26.22■■□□□ 1.79
CRAT-207ENST00000458362 CPSF1Q10570 1443 aaKnown RBP26.22■■□□□ 1.79
CRAT-207ENST00000458362 ZRANB1Q9UGI0 708 aa26.21■■□□□ 1.79
CRAT-207ENST00000458362 ALDH1L2Q3SY69 923 aa26.2■■□□□ 1.78
CRAT-207ENST00000458362 NME9Q86XW9 330 aa26.2■■□□□ 1.78
CRAT-207ENST00000458362 THUMPD2Q9BTF0 503 aaKnown RBP26.2■■□□□ 1.78
CRAT-207ENST00000458362 PPIP5K1Q6PFW1 1433 aa26.2■■□□□ 1.78
CRAT-207ENST00000458362 IPO8O15397 1037 aaKnown RBP26.19■■□□□ 1.78
CRAT-207ENST00000458362 NFE2L2Q16236 605 aa26.19■■□□□ 1.78
CRAT-207ENST00000458362 SMC5Q8IY18 1101 aa26.19■■□□□ 1.78
CRAT-207ENST00000458362 IL27Q8NEV9 243 aa26.19■■□□□ 1.78
CRAT-207ENST00000458362 METP08581 1390 aa26.19■■□□□ 1.78
CRAT-207ENST00000458362 EDC4Q6P2E9 1401 aaKnown RBP26.19■■□□□ 1.78
CRAT-207ENST00000458362 WASLO00401 505 aaPredicted RBP26.18■■□□□ 1.78
CRAT-207ENST00000458362 IL13P35225 146 aa26.17■■□□□ 1.78
CRAT-207ENST00000458362 SLKQ9H2G2 1235 aaPredicted RBP26.17■■□□□ 1.78
CRAT-207ENST00000458362 NCKAP5LQ9HCH0 1330 aa26.16■■□□□ 1.78
CRAT-207ENST00000458362 TBC1D2Q9BYX2 928 aa26.16■■□□□ 1.78
CRAT-207ENST00000458362 TXNDC2Q86VQ3 553 aa26.15■■□□□ 1.78
CRAT-207ENST00000458362 CPS1P31327 1500 aa26.15■■□□□ 1.78
CRAT-207ENST00000458362 ANTXR1Q9H6X2 564 aa26.14■■□□□ 1.78
CRAT-207ENST00000458362 CDK12Q9NYV4 1490 aaPredicted RBP26.14■■□□□ 1.78
CRAT-207ENST00000458362 VAMP4O75379 141 aa26.13■■□□□ 1.77
CRAT-207ENST00000458362 TSPYL6Q8N831 410 aa26.13■■□□□ 1.77
CRAT-207ENST00000458362 MON2Q7Z3U7 1717 aa26.13■■□□□ 1.77
CRAT-207ENST00000458362 BRPF1P55201 1214 aaPredicted RBP26.12■■□□□ 1.77
CRAT-207ENST00000458362 DLG5Q8TDM6 1919 aa26.12■■□□□ 1.77
CRAT-207ENST00000458362 NUDT16Q96DE0 195 aaKnown RBP26.12■■□□□ 1.77
CRAT-207ENST00000458362 MRPL50Q8N5N7 158 aaKnown RBP26.11■■□□□ 1.77
CRAT-207ENST00000458362 MFAP1P55081 439 aaKnown RBP26.11■■□□□ 1.77
CRAT-207ENST00000458362 AATKQ6ZMQ8 1374 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 282.9 ms