RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 SHPRHQ149N8 1683 aa9.47□□□□□ -0.89
CDKN3-205ENST00000458126 DNMT1P26358 1616 aaKnown RBP9.46□□□□□ -0.89
CDKN3-205ENST00000458126 FAM98CQ17RN3 349 aaKnown RBP9.46□□□□□ -0.9
CDKN3-205ENST00000458126 PACS2Q86VP3 889 aa9.46□□□□□ -0.9
CDKN3-205ENST00000458126 ZFRQ96KR1 1074 aaKnown RBP9.46□□□□□ -0.9
CDKN3-205ENST00000458126 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
CDKN3-205ENST00000458126 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
CDKN3-205ENST00000458126 R3HDM1Q15032 1099 aaKnown RBP9.45□□□□□ -0.9
CDKN3-205ENST00000458126 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
CDKN3-205ENST00000458126 NPHP4O75161 1426 aaPredicted RBP9.45□□□□□ -0.9
CDKN3-205ENST00000458126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.45□□□□□ -0.9
CDKN3-205ENST00000458126 MROH2AA6NES4 1674 aa9.45□□□□□ -0.9
CDKN3-205ENST00000458126 PRSS12P56730 875 aa9.44□□□□□ -0.9
CDKN3-205ENST00000458126 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
CDKN3-205ENST00000458126 CFAP74Q9C0B2 1584 aa9.43□□□□□ -0.9
CDKN3-205ENST00000458126 KDM5DQ9BY66 1539 aa9.43□□□□□ -0.9
CDKN3-205ENST00000458126 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
CDKN3-205ENST00000458126 SF3B2Q13435 895 aaKnown RBP9.43□□□□□ -0.9
CDKN3-205ENST00000458126 CDCA7LQ96GN5 454 aa9.43□□□□□ -0.9
CDKN3-205ENST00000458126 SEPT9Q9UHD8 586 aaPredicted RBP9.43□□□□□ -0.9
CDKN3-205ENST00000458126 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
CDKN3-205ENST00000458126 REREQ9P2R6 1566 aa9.42□□□□□ -0.9
CDKN3-205ENST00000458126 ATP10BO94823 1461 aa9.42□□□□□ -0.9
CDKN3-205ENST00000458126 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
CDKN3-205ENST00000458126 NYAP1Q6ZVC0 841 aa9.42□□□□□ -0.9
CDKN3-205ENST00000458126 DNAJC5GQ8N7S2 189 aa9.42□□□□□ -0.9
CDKN3-205ENST00000458126 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
CDKN3-205ENST00000458126 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
CDKN3-205ENST00000458126 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
CDKN3-205ENST00000458126 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
CDKN3-205ENST00000458126 DEPDC5O75140 1603 aa9.4□□□□□ -0.9
CDKN3-205ENST00000458126 BCAMP50895 628 aa9.39□□□□□ -0.91
CDKN3-205ENST00000458126 PPP1R1BQ9UD71 204 aaPredicted RBP9.39□□□□□ -0.91
CDKN3-205ENST00000458126 IQGAP1P46940 1657 aa9.39□□□□□ -0.91
CDKN3-205ENST00000458126 P3H3Q8IVL6 736 aa9.38□□□□□ -0.91
CDKN3-205ENST00000458126 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.38□□□□□ -0.91
CDKN3-205ENST00000458126 LRCH3Q96II8 777 aa9.37□□□□□ -0.91
CDKN3-205ENST00000458126 C8orf37Q96NL8 207 aa9.37□□□□□ -0.91
CDKN3-205ENST00000458126 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
CDKN3-205ENST00000458126 NBPF26B4DH59 902 aa9.36□□□□□ -0.91
CDKN3-205ENST00000458126 TATDN2Q93075 761 aa9.36□□□□□ -0.91
CDKN3-205ENST00000458126 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
CDKN3-205ENST00000458126 TSR3Q9UJK0 312 aaKnown RBP9.36□□□□□ -0.91
CDKN3-205ENST00000458126 UNC13BO14795 1591 aa9.36□□□□□ -0.91
CDKN3-205ENST00000458126 RALGAPBQ86X10 1494 aa9.35□□□□□ -0.91
CDKN3-205ENST00000458126 RGS20O76081 388 aa9.35□□□□□ -0.91
CDKN3-205ENST00000458126 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
CDKN3-205ENST00000458126 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
CDKN3-205ENST00000458126 NPDC1Q9NQX5 325 aaPredicted RBP9.35□□□□□ -0.91
CDKN3-205ENST00000458126 WBP1LQ9NX94 342 aa9.35□□□□□ -0.91
CDKN3-205ENST00000458126 PCNTO95613 3336 aa9.34□□□□□ -0.91
CDKN3-205ENST00000458126 TRPC5Q9UL62 973 aaPredicted RBP9.34□□□□□ -0.91
CDKN3-205ENST00000458126 SHANK3Q9BYB0 1731 aa9.34□□□□□ -0.92
CDKN3-205ENST00000458126 MLLT3P42568 568 aaPredicted RBP9.33□□□□□ -0.92
CDKN3-205ENST00000458126 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
CDKN3-205ENST00000458126 JMYQ8N9B5 988 aa9.33□□□□□ -0.92
CDKN3-205ENST00000458126 PNMA3Q9UL41 463 aa9.33□□□□□ -0.92
CDKN3-205ENST00000458126 SCAPERQ9BY12 1400 aa9.32□□□□□ -0.92
CDKN3-205ENST00000458126 ABCC1P33527 1531 aa9.32□□□□□ -0.92
CDKN3-205ENST00000458126 UGGT2Q9NYU1 1516 aa9.32□□□□□ -0.92
CDKN3-205ENST00000458126 BAG6P46379 1132 aa9.32□□□□□ -0.92
CDKN3-205ENST00000458126 APLP1P51693 650 aa9.32□□□□□ -0.92
CDKN3-205ENST00000458126 HPS5Q9UPZ3 1129 aa9.32□□□□□ -0.92
CDKN3-205ENST00000458126 ARHGAP23Q9P227 1491 aa9.32□□□□□ -0.92
CDKN3-205ENST00000458126 DIP2CQ9Y2E4 1556 aa9.32□□□□□ -0.92
CDKN3-205ENST00000458126 SMAPO00193 183 aa9.31□□□□□ -0.92
CDKN3-205ENST00000458126 NUDT18Q6ZVK8 323 aa9.31□□□□□ -0.92
CDKN3-205ENST00000458126 SLAIN2Q9P270 581 aa9.31□□□□□ -0.92
CDKN3-205ENST00000458126 DIP2AQ14689 1571 aa9.31□□□□□ -0.92
CDKN3-205ENST00000458126 ADGBQ8N7X0 1667 aa9.31□□□□□ -0.92
CDKN3-205ENST00000458126 KIF14Q15058 1648 aa9.31□□□□□ -0.92
CDKN3-205ENST00000458126 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
CDKN3-205ENST00000458126 MAP3K1Q13233 1512 aa9.31□□□□□ -0.92
CDKN3-205ENST00000458126 TMEM94Q12767 1356 aa9.3□□□□□ -0.92
CDKN3-205ENST00000458126 A0A0G2JS52 829 aa9.3□□□□□ -0.92
CDKN3-205ENST00000458126 PPP4CP60510 307 aa9.3□□□□□ -0.92
CDKN3-205ENST00000458126 SAMD7Q7Z3H4 446 aa9.3□□□□□ -0.92
CDKN3-205ENST00000458126 ATRNO75882 1429 aa9.3□□□□□ -0.92
CDKN3-205ENST00000458126 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
CDKN3-205ENST00000458126 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
CDKN3-205ENST00000458126 SPON1Q9HCB6 807 aa9.29□□□□□ -0.92
CDKN3-205ENST00000458126 FAM83GA6ND36 823 aa9.28□□□□□ -0.92
CDKN3-205ENST00000458126 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
CDKN3-205ENST00000458126 PITPNM2Q9BZ72 1349 aa9.28□□□□□ -0.92
CDKN3-205ENST00000458126 MLLT1Q03111 559 aaPredicted RBP9.27□□□□□ -0.93
CDKN3-205ENST00000458126 PTGDRQ13258 359 aa9.27□□□□□ -0.93
CDKN3-205ENST00000458126 KIAA1210Q9ULL0 1709 aa9.27□□□□□ -0.93
CDKN3-205ENST00000458126 ZC3H13Q5T200 1668 aaKnown RBP9.26□□□□□ -0.93
CDKN3-205ENST00000458126 KCNC4Q03721 635 aa9.26□□□□□ -0.93
CDKN3-205ENST00000458126 MPNDQ8N594 471 aa9.26□□□□□ -0.93
CDKN3-205ENST00000458126 NECTIN2Q92692 538 aa9.26□□□□□ -0.93
CDKN3-205ENST00000458126 USP21Q9UK80 565 aa9.26□□□□□ -0.93
CDKN3-205ENST00000458126 ATP7AQ04656 1500 aa9.26□□□□□ -0.93
CDKN3-205ENST00000458126 EYA1Q99502 592 aa9.25□□□□□ -0.93
CDKN3-205ENST00000458126 SPHKAPQ2M3C7 1700 aa9.25□□□□□ -0.93
CDKN3-205ENST00000458126 SEMA3EO15041 775 aa9.24□□□□□ -0.93
CDKN3-205ENST00000458126 KCNQ2O43526 872 aa9.24□□□□□ -0.93
CDKN3-205ENST00000458126 THEMISQ8N1K5 641 aaPredicted RBP9.24□□□□□ -0.93
CDKN3-205ENST00000458126 PLCH2O75038 1416 aa9.23□□□□□ -0.93
CDKN3-205ENST00000458126 VSIG10Q8N0Z9 540 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms