RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 FAM69CQ0P6D2 419 aa22.57■■□□□ 1.2
CCDC144A-210ENST00000456009 WAPLQ7Z5K2 1190 aa22.57■■□□□ 1.2
CCDC144A-210ENST00000456009 MAPK8IP3Q9UPT6 1336 aa22.56■■□□□ 1.2
CCDC144A-210ENST00000456009 ALKQ9UM73 1620 aa22.55■■□□□ 1.2
CCDC144A-210ENST00000456009 MVPQ14764 893 aaKnown RBP22.54■■□□□ 1.2
CCDC144A-210ENST00000456009 PDZRN3Q9UPQ7 1066 aa22.54■■□□□ 1.2
CCDC144A-210ENST00000456009 RIPK4P57078 832 aa22.54■■□□□ 1.2
CCDC144A-210ENST00000456009 NFKBIBQ15653 356 aa22.54■■□□□ 1.2
CCDC144A-210ENST00000456009 ZKSCAN2Q63HK3 967 aa22.54■■□□□ 1.2
CCDC144A-210ENST00000456009 HDGFL2Q7Z4V5 671 aaPredicted RBP22.54■■□□□ 1.2
CCDC144A-210ENST00000456009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.2
CCDC144A-210ENST00000456009 ARHGEF40Q8TER5 1519 aa22.53■■□□□ 1.2
CCDC144A-210ENST00000456009 DIAPH1O60610 1272 aaKnown RBP22.53■■□□□ 1.2
CCDC144A-210ENST00000456009 AAMPQ13685 434 aa22.53■■□□□ 1.2
CCDC144A-210ENST00000456009 DZIP1LQ8IYY4 767 aaKnown RBP22.53■■□□□ 1.2
CCDC144A-210ENST00000456009 SSH1Q8WYL5 1049 aa22.53■■□□□ 1.2
CCDC144A-210ENST00000456009 SMC4Q9NTJ3 1288 aa22.53■■□□□ 1.2
CCDC144A-210ENST00000456009 FTSJ3Q8IY81 847 aaKnown RBP22.51■■□□□ 1.19
CCDC144A-210ENST00000456009 TRIM27P14373 513 aa22.51■■□□□ 1.19
CCDC144A-210ENST00000456009 PNPLA6Q8IY17 1366 aa22.5■■□□□ 1.19
CCDC144A-210ENST00000456009 RWDD1Q9H446 243 aaPredicted RBP22.5■■□□□ 1.19
CCDC144A-210ENST00000456009 MED14O60244 1454 aa22.5■■□□□ 1.19
CCDC144A-210ENST00000456009 CLTCQ00610 1675 aaKnown RBP22.49■■□□□ 1.19
CCDC144A-210ENST00000456009 CT47B1P0C2W7 299 aaPredicted RBP22.49■■□□□ 1.19
CCDC144A-210ENST00000456009 MLECQ14165 292 aa22.48■■□□□ 1.19
CCDC144A-210ENST00000456009 POLKQ9UBT6 870 aa22.47■■□□□ 1.19
CCDC144A-210ENST00000456009 NOB1Q9ULX3 412 aaKnown RBP22.47■■□□□ 1.19
CCDC144A-210ENST00000456009 ANKRD26Q9UPS8 1709 aa22.45■■□□□ 1.18
CCDC144A-210ENST00000456009 VIRMAQ69YN4 1812 aaKnown RBP22.45■■□□□ 1.18
CCDC144A-210ENST00000456009 ATF7IPQ6VMQ6 1270 aa22.45■■□□□ 1.18
CCDC144A-210ENST00000456009 IL16Q14005 1332 aa22.44■■□□□ 1.18
CCDC144A-210ENST00000456009 A2ML1A8K2U0 1454 aa22.44■■□□□ 1.18
CCDC144A-210ENST00000456009 ITPRIPQ8IWB1 547 aa22.44■■□□□ 1.18
CCDC144A-210ENST00000456009 PRKAR2BP31323 418 aa22.43■■□□□ 1.18
CCDC144A-210ENST00000456009 FCHSD2O94868 740 aa22.43■■□□□ 1.18
CCDC144A-210ENST00000456009 PHACTR3Q96KR7 559 aa22.42■■□□□ 1.18
CCDC144A-210ENST00000456009 RSPH6AQ9H0K4 717 aa22.42■■□□□ 1.18
CCDC144A-210ENST00000456009 HMOX1P09601 288 aa22.42■■□□□ 1.18
CCDC144A-210ENST00000456009 RIMS2Q9UQ26 1411 aa22.41■■□□□ 1.18
CCDC144A-210ENST00000456009 TMEM57Q8N5G2 664 aa22.41■■□□□ 1.18
CCDC144A-210ENST00000456009 ZRANB1Q9UGI0 708 aa22.41■■□□□ 1.18
CCDC144A-210ENST00000456009 TSPOAP1O95153 1857 aa22.41■■□□□ 1.18
CCDC144A-210ENST00000456009 FRAT2O75474 233 aaPredicted RBP22.41■■□□□ 1.18
CCDC144A-210ENST00000456009 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
CCDC144A-210ENST00000456009 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
CCDC144A-210ENST00000456009 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
CCDC144A-210ENST00000456009 THUMPD2Q9BTF0 503 aaKnown RBP22.39■■□□□ 1.17
CCDC144A-210ENST00000456009 DDX19BQ9UMR2 479 aa22.39■■□□□ 1.17
CCDC144A-210ENST00000456009 TXNDC2Q86VQ3 553 aa22.38■■□□□ 1.17
CCDC144A-210ENST00000456009 NME9Q86XW9 330 aa22.38■■□□□ 1.17
CCDC144A-210ENST00000456009 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
CCDC144A-210ENST00000456009 LRRC7Q96NW7 1537 aa22.37■■□□□ 1.17
CCDC144A-210ENST00000456009 KIF20BQ96Q89 1820 aa22.37■■□□□ 1.17
CCDC144A-210ENST00000456009 METP08581 1390 aa22.37■■□□□ 1.17
CCDC144A-210ENST00000456009 DIP2BQ9P265 1576 aa22.37■■□□□ 1.17
CCDC144A-210ENST00000456009 WASLO00401 505 aaPredicted RBP22.36■■□□□ 1.17
CCDC144A-210ENST00000456009 HDAC1Q13547 482 aaPredicted RBP22.36■■□□□ 1.17
CCDC144A-210ENST00000456009 TBC1D32Q96NH3 1257 aa22.36■■□□□ 1.17
CCDC144A-210ENST00000456009 ZBTB40Q9NUA8 1239 aa22.36■■□□□ 1.17
CCDC144A-210ENST00000456009 FAM135BQ49AJ0 1406 aa22.35■■□□□ 1.17
CCDC144A-210ENST00000456009 GSE1Q14687 1217 aa22.35■■□□□ 1.17
CCDC144A-210ENST00000456009 DLC1Q96QB1 1528 aa22.35■■□□□ 1.17
CCDC144A-210ENST00000456009 AGLP35573 1532 aa22.34■■□□□ 1.17
CCDC144A-210ENST00000456009 ATP7BP35670 1465 aa22.34■■□□□ 1.17
CCDC144A-210ENST00000456009 SPATA31D1Q6ZQQ2 1576 aa22.34■■□□□ 1.17
CCDC144A-210ENST00000456009 ZMYM3Q14202 1370 aa22.34■■□□□ 1.17
CCDC144A-210ENST00000456009 IL13P35225 146 aa22.33■■□□□ 1.17
CCDC144A-210ENST00000456009 SETD1AO15047 1707 aaKnown RBP22.33■■□□□ 1.17
CCDC144A-210ENST00000456009 CPSF1Q10570 1443 aaKnown RBP22.33■■□□□ 1.16
CCDC144A-210ENST00000456009 PPIP5K1Q6PFW1 1433 aa22.33■■□□□ 1.16
CCDC144A-210ENST00000456009 NFE2L2Q16236 605 aa22.32■■□□□ 1.16
CCDC144A-210ENST00000456009 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
CCDC144A-210ENST00000456009 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
CCDC144A-210ENST00000456009 MAP2P11137 1827 aaKnown RBP22.32■■□□□ 1.16
CCDC144A-210ENST00000456009 SLKQ9H2G2 1235 aaPredicted RBP22.32■■□□□ 1.16
CCDC144A-210ENST00000456009 CDC42BPGQ6DT37 1551 aa22.32■■□□□ 1.16
CCDC144A-210ENST00000456009 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 IPO8O15397 1037 aaKnown RBP22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 ALDH1L2Q3SY69 923 aa22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 NUDT16Q96DE0 195 aaKnown RBP22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 UPF2Q9HAU5 1272 aaKnown RBP22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 SMC5Q8IY18 1101 aa22.31■■□□□ 1.16
CCDC144A-210ENST00000456009 ELL2O00472 640 aaPredicted RBP22.3■■□□□ 1.16
CCDC144A-210ENST00000456009 REREQ9P2R6 1566 aa22.3■■□□□ 1.16
CCDC144A-210ENST00000456009 VAMP4O75379 141 aa22.3■■□□□ 1.16
CCDC144A-210ENST00000456009 BECN1Q14457 450 aa22.3■■□□□ 1.16
CCDC144A-210ENST00000456009 IL27Q8NEV9 243 aa22.29■■□□□ 1.16
CCDC144A-210ENST00000456009 EDC4Q6P2E9 1401 aaKnown RBP22.29■■□□□ 1.16
CCDC144A-210ENST00000456009 TBC1D2Q9BYX2 928 aa22.28■■□□□ 1.16
CCDC144A-210ENST00000456009 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
CCDC144A-210ENST00000456009 CCDC61Q9Y6R9 512 aa22.26■■□□□ 1.15
CCDC144A-210ENST00000456009 MBIPQ9NS73 344 aa22.26■■□□□ 1.15
CCDC144A-210ENST00000456009 CPS1P31327 1500 aa22.26■■□□□ 1.15
CCDC144A-210ENST00000456009 FAM83GA6ND36 823 aa22.25■■□□□ 1.15
CCDC144A-210ENST00000456009 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
CCDC144A-210ENST00000456009 MRPL50Q8N5N7 158 aaKnown RBP22.25■■□□□ 1.15
CCDC144A-210ENST00000456009 ANTXR1Q9H6X2 564 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms