RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 ZMYND15Q9H091 742 aa9.66□□□□□ -0.86
KARSP1-201ENST00000451871 LRRC9Q6ZRR7 1453 aa9.66□□□□□ -0.86
KARSP1-201ENST00000451871 EVI5O60447 810 aa9.65□□□□□ -0.86
KARSP1-201ENST00000451871 YY1P25490 414 aa9.65□□□□□ -0.86
KARSP1-201ENST00000451871 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.86
KARSP1-201ENST00000451871 ATAD2Q6PL18 1390 aa9.65□□□□□ -0.86
KARSP1-201ENST00000451871 KCNA6P17658 529 aa9.65□□□□□ -0.87
KARSP1-201ENST00000451871 PROSER2Q86WR7 435 aaPredicted RBP9.65□□□□□ -0.87
KARSP1-201ENST00000451871 SLAIN2Q9P270 581 aa9.65□□□□□ -0.87
KARSP1-201ENST00000451871 NCOA2Q15596 1464 aa9.64□□□□□ -0.87
KARSP1-201ENST00000451871 ARHGAP23Q9P227 1491 aa9.64□□□□□ -0.87
KARSP1-201ENST00000451871 TBC1D12O60347 775 aa9.64□□□□□ -0.87
KARSP1-201ENST00000451871 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
KARSP1-201ENST00000451871 EID1Q9Y6B2 187 aa9.64□□□□□ -0.87
KARSP1-201ENST00000451871 SLIT1O75093 1534 aa9.64□□□□□ -0.87
KARSP1-201ENST00000451871 MAP3K1Q13233 1512 aa9.64□□□□□ -0.87
KARSP1-201ENST00000451871 ERVK-7P63135 1459 aa9.64□□□□□ -0.87
KARSP1-201ENST00000451871 SPATA31A6Q5VVP1 1343 aa9.64□□□□□ -0.87
KARSP1-201ENST00000451871 NHSL1Q5SYE7 1610 aa9.63□□□□□ -0.87
KARSP1-201ENST00000451871 FYCO1Q9BQS8 1478 aa9.62□□□□□ -0.87
KARSP1-201ENST00000451871 EP400Q96L91 3159 aa9.62□□□□□ -0.87
KARSP1-201ENST00000451871 NUTM2FA1L443 756 aa9.62□□□□□ -0.87
KARSP1-201ENST00000451871 SLC34A2O95436 690 aa9.62□□□□□ -0.87
KARSP1-201ENST00000451871 MSH6P52701 1360 aa9.61□□□□□ -0.87
KARSP1-201ENST00000451871 TRIM66O15016 1216 aa9.61□□□□□ -0.87
KARSP1-201ENST00000451871 ABCC3O15438 1527 aa9.61□□□□□ -0.87
KARSP1-201ENST00000451871 FGD6Q6ZV73 1430 aa9.61□□□□□ -0.87
KARSP1-201ENST00000451871 SENP3-EIF4A1A0A087X0R7 540 aa9.6□□□□□ -0.87
KARSP1-201ENST00000451871 PDE4DQ08499 809 aa9.6□□□□□ -0.87
KARSP1-201ENST00000451871 RSPH4AQ5TD94 716 aa9.6□□□□□ -0.87
KARSP1-201ENST00000451871 PRDM15P57071 1507 aaPredicted RBP9.6□□□□□ -0.87
KARSP1-201ENST00000451871 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
KARSP1-201ENST00000451871 ARID3AQ99856 593 aa9.6□□□□□ -0.87
KARSP1-201ENST00000451871 RSPH6AQ9H0K4 717 aa9.6□□□□□ -0.87
KARSP1-201ENST00000451871 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
KARSP1-201ENST00000451871 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.6□□□□□ -0.87
KARSP1-201ENST00000451871 TIAM1Q13009 1591 aa9.59□□□□□ -0.87
KARSP1-201ENST00000451871 CCDC141Q6ZP82 1450 aa9.59□□□□□ -0.87
KARSP1-201ENST00000451871 MTUS2Q5JR59 1369 aa9.59□□□□□ -0.87
KARSP1-201ENST00000451871 TRIM26Q12899 539 aaPredicted RBP9.58□□□□□ -0.88
KARSP1-201ENST00000451871 AFF2P51816 1311 aa9.58□□□□□ -0.88
KARSP1-201ENST00000451871 TMEM2Q9UHN6 1383 aa9.58□□□□□ -0.88
KARSP1-201ENST00000451871 FECHP22830 423 aa9.58□□□□□ -0.88
KARSP1-201ENST00000451871 TET3O43151 1660 aa9.57□□□□□ -0.88
KARSP1-201ENST00000451871 CEP152O94986 1710 aa9.57□□□□□ -0.88
KARSP1-201ENST00000451871 NWD1Q149M9 1564 aa9.57□□□□□ -0.88
KARSP1-201ENST00000451871 NKTRP30414 1462 aaKnown RBP9.57□□□□□ -0.88
KARSP1-201ENST00000451871 POTEJP0CG39 1038 aa9.57□□□□□ -0.88
KARSP1-201ENST00000451871 TSPY4P0CV99 314 aa9.57□□□□□ -0.88
KARSP1-201ENST00000451871 TSPY10P0CW01 314 aa9.57□□□□□ -0.88
KARSP1-201ENST00000451871 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
KARSP1-201ENST00000451871 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
KARSP1-201ENST00000451871 FAM117AQ9C073 453 aa9.55□□□□□ -0.88
KARSP1-201ENST00000451871 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
KARSP1-201ENST00000451871 PIK3C2BO00750 1634 aa9.55□□□□□ -0.88
KARSP1-201ENST00000451871 GNPATO15228 680 aa9.55□□□□□ -0.88
KARSP1-201ENST00000451871 CAMSAP2Q08AD1 1489 aa9.54□□□□□ -0.88
KARSP1-201ENST00000451871 KDM5AP29375 1690 aaKnown RBP9.54□□□□□ -0.88
KARSP1-201ENST00000451871 PTGDRQ13258 359 aa9.54□□□□□ -0.88
KARSP1-201ENST00000451871 PCDHGA4Q9Y5G9 962 aa9.54□□□□□ -0.88
KARSP1-201ENST00000451871 AHDC1Q5TGY3 1603 aaPredicted RBP9.54□□□□□ -0.88
KARSP1-201ENST00000451871 MROH1Q8NDA8 1641 aa9.54□□□□□ -0.88
KARSP1-201ENST00000451871 CHD2O14647 1828 aaKnown RBP9.53□□□□□ -0.88
KARSP1-201ENST00000451871 POTEB2H3BUK9 544 aa9.53□□□□□ -0.88
KARSP1-201ENST00000451871 MAP2K5Q13163 448 aa9.53□□□□□ -0.88
KARSP1-201ENST00000451871 HIC1Q14526 733 aa9.53□□□□□ -0.88
KARSP1-201ENST00000451871 CCDC125Q86Z20 511 aa9.53□□□□□ -0.88
KARSP1-201ENST00000451871 CCDC102AQ96A19 550 aa9.53□□□□□ -0.88
KARSP1-201ENST00000451871 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
KARSP1-201ENST00000451871 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.88
KARSP1-201ENST00000451871 IRF6O14896 467 aa9.52□□□□□ -0.88
KARSP1-201ENST00000451871 FCHSD2O94868 740 aa9.52□□□□□ -0.88
KARSP1-201ENST00000451871 ARHGAP31Q2M1Z3 1444 aa9.52□□□□□ -0.88
KARSP1-201ENST00000451871 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.88
KARSP1-201ENST00000451871 EIF2AK4Q9P2K8 1649 aaKnown RBP9.52□□□□□ -0.89
KARSP1-201ENST00000451871 CEP162Q5TB80 1403 aa9.52□□□□□ -0.89
KARSP1-201ENST00000451871 HRCP23327 699 aa9.52□□□□□ -0.89
KARSP1-201ENST00000451871 IDI1Q13907 227 aa9.52□□□□□ -0.89
KARSP1-201ENST00000451871 PCDHGA10Q9Y5H3 936 aa9.52□□□□□ -0.89
KARSP1-201ENST00000451871 ARHGEF5Q12774 1597 aa9.51□□□□□ -0.89
KARSP1-201ENST00000451871 EFCAB6Q5THR3 1501 aa9.51□□□□□ -0.89
KARSP1-201ENST00000451871 PHF14O94880 888 aa9.51□□□□□ -0.89
KARSP1-201ENST00000451871 DIP2AQ14689 1571 aa9.51□□□□□ -0.89
KARSP1-201ENST00000451871 NCOA3Q9Y6Q9 1424 aa9.51□□□□□ -0.89
KARSP1-201ENST00000451871 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
KARSP1-201ENST00000451871 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
KARSP1-201ENST00000451871 C8orf37Q96NL8 207 aa9.5□□□□□ -0.89
KARSP1-201ENST00000451871 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
KARSP1-201ENST00000451871 EHBP1L1Q8N3D4 1523 aa9.5□□□□□ -0.89
KARSP1-201ENST00000451871 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.5□□□□□ -0.89
KARSP1-201ENST00000451871 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
KARSP1-201ENST00000451871 PLEKHG3A1L390 1219 aa9.49□□□□□ -0.89
KARSP1-201ENST00000451871 ATF3P18847 181 aa9.49□□□□□ -0.89
KARSP1-201ENST00000451871 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
KARSP1-201ENST00000451871 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
KARSP1-201ENST00000451871 MAST1Q9Y2H9 1570 aa9.48□□□□□ -0.89
KARSP1-201ENST00000451871 BCL9LQ86UU0 1499 aa9.48□□□□□ -0.89
KARSP1-201ENST00000451871 MAP3K7O43318 606 aa9.47□□□□□ -0.89
KARSP1-201ENST00000451871 EPAS1Q99814 870 aa9.47□□□□□ -0.89
KARSP1-201ENST00000451871 HOXB3P14651 431 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms