RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 PLEKHF1Q96S99 279 aa14.33□□□□□ -0.12
SYVN1-204ENST00000449943 TERF2IPQ9NYB0 399 aa14.33□□□□□ -0.12
SYVN1-204ENST00000449943 FBLN1P23142 703 aa14.33□□□□□ -0.12
SYVN1-204ENST00000449943 ATF7IPQ6VMQ6 1270 aa14.33□□□□□ -0.12
SYVN1-204ENST00000449943 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
SYVN1-204ENST00000449943 FYB1O15117 783 aa14.32□□□□□ -0.12
SYVN1-204ENST00000449943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.32□□□□□ -0.12
SYVN1-204ENST00000449943 DDX19BQ9UMR2 479 aa14.32□□□□□ -0.12
SYVN1-204ENST00000449943 DIAPH1O60610 1272 aaKnown RBP14.31□□□□□ -0.12
SYVN1-204ENST00000449943 VIRMAQ69YN4 1812 aaKnown RBP14.31□□□□□ -0.12
SYVN1-204ENST00000449943 MLH3Q9UHC1 1453 aa14.31□□□□□ -0.12
SYVN1-204ENST00000449943 C22orf23Q9BZE7 217 aa14.31□□□□□ -0.12
SYVN1-204ENST00000449943 HECW2Q9P2P5 1572 aa14.31□□□□□ -0.12
SYVN1-204ENST00000449943 ABCC11Q96J66 1382 aa14.31□□□□□ -0.12
SYVN1-204ENST00000449943 C14orf37Q86TY3 774 aa14.31□□□□□ -0.12
SYVN1-204ENST00000449943 PUS7Q96PZ0 661 aaKnown RBP14.3□□□□□ -0.12
SYVN1-204ENST00000449943 USP32Q8NFA0 1604 aa14.3□□□□□ -0.12
SYVN1-204ENST00000449943 HDGFL2Q7Z4V5 671 aaPredicted RBP14.3□□□□□ -0.12
SYVN1-204ENST00000449943 CAMSAP1Q5T5Y3 1602 aa14.29□□□□□ -0.12
SYVN1-204ENST00000449943 CABP1Q9NZU7 370 aa14.29□□□□□ -0.12
SYVN1-204ENST00000449943 NEXMIFQ5QGS0 1516 aa14.29□□□□□ -0.12
SYVN1-204ENST00000449943 ARHGEF28Q8N1W1 1705 aaKnown RBP14.29□□□□□ -0.12
SYVN1-204ENST00000449943 CT47B1P0C2W7 299 aaPredicted RBP14.29□□□□□ -0.12
SYVN1-204ENST00000449943 ANTXR1Q9H6X2 564 aa14.29□□□□□ -0.12
SYVN1-204ENST00000449943 LNPKQ9C0E8 428 aa14.29□□□□□ -0.12
SYVN1-204ENST00000449943 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
SYVN1-204ENST00000449943 CDK19Q9BWU1 502 aa14.28□□□□□ -0.12
SYVN1-204ENST00000449943 HMOX1P09601 288 aa14.27□□□□□ -0.12
SYVN1-204ENST00000449943 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.12
SYVN1-204ENST00000449943 SIGLEC1Q9BZZ2 1709 aa14.27□□□□□ -0.12
SYVN1-204ENST00000449943 PRKAR2BP31323 418 aa14.27□□□□□ -0.13
SYVN1-204ENST00000449943 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
SYVN1-204ENST00000449943 FBXO31Q5XUX0 539 aaPredicted RBP14.27□□□□□ -0.13
SYVN1-204ENST00000449943 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
SYVN1-204ENST00000449943 ATAD2Q6PL18 1390 aa14.27□□□□□ -0.13
SYVN1-204ENST00000449943 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
SYVN1-204ENST00000449943 ADGRB2O60241 1585 aa14.26□□□□□ -0.13
SYVN1-204ENST00000449943 C1orf115Q9H7X2 142 aa14.26□□□□□ -0.13
SYVN1-204ENST00000449943 SLC52A1Q9NWF4 448 aa14.25□□□□□ -0.13
SYVN1-204ENST00000449943 KIF16BQ96L93 1317 aa14.25□□□□□ -0.13
SYVN1-204ENST00000449943 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
SYVN1-204ENST00000449943 HSCBQ8IWL3 235 aa14.24□□□□□ -0.13
SYVN1-204ENST00000449943 ZBTB40Q9NUA8 1239 aa14.24□□□□□ -0.13
SYVN1-204ENST00000449943 ZMYM3Q14202 1370 aa14.24□□□□□ -0.13
SYVN1-204ENST00000449943 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
SYVN1-204ENST00000449943 CFAP74Q9C0B2 1584 aa14.23□□□□□ -0.13
SYVN1-204ENST00000449943 WAPLQ7Z5K2 1190 aa14.23□□□□□ -0.13
SYVN1-204ENST00000449943 SMC5Q8IY18 1101 aa14.23□□□□□ -0.13
SYVN1-204ENST00000449943 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
SYVN1-204ENST00000449943 IL16Q14005 1332 aa14.23□□□□□ -0.13
SYVN1-204ENST00000449943 YTHDC2Q9H6S0 1430 aaKnown RBP14.23□□□□□ -0.13
SYVN1-204ENST00000449943 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
SYVN1-204ENST00000449943 PIK3C2BO00750 1634 aa14.22□□□□□ -0.13
SYVN1-204ENST00000449943 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
SYVN1-204ENST00000449943 PHACTR3Q96KR7 559 aa14.22□□□□□ -0.13
SYVN1-204ENST00000449943 MCM4P33991 863 aa14.21□□□□□ -0.13
SYVN1-204ENST00000449943 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.13
SYVN1-204ENST00000449943 PTPRMP28827 1452 aa14.21□□□□□ -0.13
SYVN1-204ENST00000449943 CHMP5Q9NZZ3 219 aa14.21□□□□□ -0.13
SYVN1-204ENST00000449943 EIF5BO60841 1220 aaKnown RBP14.2□□□□□ -0.14
SYVN1-204ENST00000449943 FCHSD2O94868 740 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 CD163L1Q9NR16 1453 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 POLKQ9UBT6 870 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 EMILIN1Q9Y6C2 1016 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 NUCB1Q02818 461 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 L1TD1Q5T7N2 865 aaKnown RBP14.2□□□□□ -0.14
SYVN1-204ENST00000449943 TSPYL6Q8N831 410 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 RSPH6AQ9H0K4 717 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
SYVN1-204ENST00000449943 DIP2CQ9Y2E4 1556 aa14.19□□□□□ -0.14
SYVN1-204ENST00000449943 ALDH1L2Q3SY69 923 aa14.19□□□□□ -0.14
SYVN1-204ENST00000449943 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
SYVN1-204ENST00000449943 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
SYVN1-204ENST00000449943 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
SYVN1-204ENST00000449943 NFE2L2Q16236 605 aa14.17□□□□□ -0.14
SYVN1-204ENST00000449943 LRRC7Q96NW7 1537 aa14.17□□□□□ -0.14
SYVN1-204ENST00000449943 HSP90AA1P07900 732 aaKnown RBP14.17□□□□□ -0.14
SYVN1-204ENST00000449943 NME9Q86XW9 330 aa14.17□□□□□ -0.14
SYVN1-204ENST00000449943 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
SYVN1-204ENST00000449943 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
SYVN1-204ENST00000449943 TRAK2O60296 914 aa14.16□□□□□ -0.14
SYVN1-204ENST00000449943 ZBTB7CA1YPR0 619 aa14.16□□□□□ -0.14
SYVN1-204ENST00000449943 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
SYVN1-204ENST00000449943 NEO1Q92859 1461 aa14.16□□□□□ -0.14
SYVN1-204ENST00000449943 MYO5BQ9ULV0 1848 aa14.16□□□□□ -0.14
SYVN1-204ENST00000449943 VAMP4O75379 141 aa14.16□□□□□ -0.14
SYVN1-204ENST00000449943 PNPLA6Q8IY17 1366 aa14.16□□□□□ -0.14
SYVN1-204ENST00000449943 MRPL50Q8N5N7 158 aaKnown RBP14.15□□□□□ -0.14
SYVN1-204ENST00000449943 RRS1Q15050 365 aaKnown RBP14.15□□□□□ -0.14
SYVN1-204ENST00000449943 MBIPQ9NS73 344 aa14.15□□□□□ -0.14
SYVN1-204ENST00000449943 FAM83GA6ND36 823 aa14.15□□□□□ -0.14
SYVN1-204ENST00000449943 ZBTB7BO15156 539 aaPredicted RBP14.15□□□□□ -0.14
SYVN1-204ENST00000449943 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
SYVN1-204ENST00000449943 PANK2Q9BZ23 570 aa14.14□□□□□ -0.15
SYVN1-204ENST00000449943 EID1Q9Y6B2 187 aa14.14□□□□□ -0.15
SYVN1-204ENST00000449943 NCKAP5LQ9HCH0 1330 aa14.14□□□□□ -0.15
SYVN1-204ENST00000449943 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
SYVN1-204ENST00000449943 MED14O60244 1454 aa14.14□□□□□ -0.15
SYVN1-204ENST00000449943 GNAI1P63096 354 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms