RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
SF1-211ENST00000448404 TRIM35Q9UPQ4 493 aa19.17■□□□□ 0.66
SF1-211ENST00000448404 IQSEC2Q5JU85 1478 aa19.17■□□□□ 0.66
SF1-211ENST00000448404 TMPOP42166 694 aaKnown RBP19.16■□□□□ 0.66
SF1-211ENST00000448404 ARHGEF40Q8TER5 1519 aa19.16■□□□□ 0.66
SF1-211ENST00000448404 CENPQQ7L2Z9 268 aaPredicted RBP19.15■□□□□ 0.66
SF1-211ENST00000448404 RIPK4P57078 832 aa19.15■□□□□ 0.66
SF1-211ENST00000448404 POLKQ9UBT6 870 aa19.15■□□□□ 0.66
SF1-211ENST00000448404 NLRP1Q9C000 1473 aa19.15■□□□□ 0.66
SF1-211ENST00000448404 DIAPH1O60610 1272 aaKnown RBP19.15■□□□□ 0.66
SF1-211ENST00000448404 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
SF1-211ENST00000448404 ZBTB47Q9UFB7 747 aaPredicted RBP19.15■□□□□ 0.66
SF1-211ENST00000448404 PCDHB15Q9Y5E8 787 aa19.14■□□□□ 0.65
SF1-211ENST00000448404 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.65
SF1-211ENST00000448404 LTKP29376 864 aa19.13■□□□□ 0.65
SF1-211ENST00000448404 PUS7Q96PZ0 661 aaKnown RBP19.13■□□□□ 0.65
SF1-211ENST00000448404 PRKAR2BP31323 418 aa19.13■□□□□ 0.65
SF1-211ENST00000448404 WASLO00401 505 aaPredicted RBP19.12■□□□□ 0.65
SF1-211ENST00000448404 NUDT16Q96DE0 195 aaKnown RBP19.12■□□□□ 0.65
SF1-211ENST00000448404 ELL2O00472 640 aaPredicted RBP19.12■□□□□ 0.65
SF1-211ENST00000448404 WDR63Q8IWG1 891 aa19.11■□□□□ 0.65
SF1-211ENST00000448404 NSD2O96028 1365 aa19.1■□□□□ 0.65
SF1-211ENST00000448404 PRR36Q9H6K5 1346 aa19.1■□□□□ 0.65
SF1-211ENST00000448404 PPIP5K1Q6PFW1 1433 aa19.09■□□□□ 0.65
SF1-211ENST00000448404 MS4A1P11836 297 aa19.09■□□□□ 0.65
SF1-211ENST00000448404 C8orf34Q49A92 452 aa19.09■□□□□ 0.65
SF1-211ENST00000448404 SSH1Q8WYL5 1049 aa19.09■□□□□ 0.65
SF1-211ENST00000448404 SMC4Q9NTJ3 1288 aa19.09■□□□□ 0.65
SF1-211ENST00000448404 COL3A1P02461 1466 aaPredicted RBP19.08■□□□□ 0.64
SF1-211ENST00000448404 USP32Q8NFA0 1604 aa19.08■□□□□ 0.64
SF1-211ENST00000448404 SPATA31D1Q6ZQQ2 1576 aa19.07■□□□□ 0.64
SF1-211ENST00000448404 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
SF1-211ENST00000448404 DCTN1Q14203 1278 aa19.07■□□□□ 0.64
SF1-211ENST00000448404 MYH16Q9H6N6 1097 aa19.07■□□□□ 0.64
SF1-211ENST00000448404 KIF13AQ9H1H9 1805 aa19.06■□□□□ 0.64
SF1-211ENST00000448404 FAM83GA6ND36 823 aa19.06■□□□□ 0.64
SF1-211ENST00000448404 RBM33Q96EV2 1170 aaKnown RBP19.06■□□□□ 0.64
SF1-211ENST00000448404 TNRQ92752 1358 aa19.06■□□□□ 0.64
SF1-211ENST00000448404 AGLP35573 1532 aa19.06■□□□□ 0.64
SF1-211ENST00000448404 PDE3AQ14432 1141 aa19.06■□□□□ 0.64
SF1-211ENST00000448404 PMFBP1Q8TBY8 1022 aa19.05■□□□□ 0.64
SF1-211ENST00000448404 SEC24BO95487 1268 aa19.04■□□□□ 0.64
SF1-211ENST00000448404 CCDC27Q2M243 656 aa19.04■□□□□ 0.64
SF1-211ENST00000448404 RSPH6AQ9H0K4 717 aa19.04■□□□□ 0.64
SF1-211ENST00000448404 NINLQ9Y2I6 1382 aa19.04■□□□□ 0.64
SF1-211ENST00000448404 NGEFQ8N5V2 710 aa19.04■□□□□ 0.64
SF1-211ENST00000448404 ANO8Q9HCE9 1232 aaPredicted RBP19.04■□□□□ 0.64
SF1-211ENST00000448404 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
SF1-211ENST00000448404 TRIM27P14373 513 aa19.03■□□□□ 0.64
SF1-211ENST00000448404 AEBP1Q8IUX7 1158 aa19.03■□□□□ 0.64
SF1-211ENST00000448404 NRXN3Q9Y4C0 1643 aa19.03■□□□□ 0.64
SF1-211ENST00000448404 CPS1P31327 1500 aa19.03■□□□□ 0.64
SF1-211ENST00000448404 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
SF1-211ENST00000448404 NOB1Q9ULX3 412 aaKnown RBP19.03■□□□□ 0.64
SF1-211ENST00000448404 CCDC61Q9Y6R9 512 aa19.02■□□□□ 0.64
SF1-211ENST00000448404 TSPYL6Q8N831 410 aa19.02■□□□□ 0.63
SF1-211ENST00000448404 ITPRIPQ8IWB1 547 aa19.01■□□□□ 0.63
SF1-211ENST00000448404 FAM161AQ3B820 660 aa19■□□□□ 0.63
SF1-211ENST00000448404 TMEM2Q9UHN6 1383 aa19■□□□□ 0.63
SF1-211ENST00000448404 PLEKHG5O94827 1062 aa19■□□□□ 0.63
SF1-211ENST00000448404 ABCF1Q8NE71 845 aaKnown RBP eCLIP19■□□□□ 0.63
SF1-211ENST00000448404 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
SF1-211ENST00000448404 COG3Q96JB2 828 aa18.99■□□□□ 0.63
SF1-211ENST00000448404 SETD1AO15047 1707 aaKnown RBP18.99■□□□□ 0.63
SF1-211ENST00000448404 PNPLA6Q8IY17 1366 aa18.99■□□□□ 0.63
SF1-211ENST00000448404 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
SF1-211ENST00000448404 ZKSCAN2Q63HK3 967 aa18.98■□□□□ 0.63
SF1-211ENST00000448404 DZIP1LQ8IYY4 767 aaKnown RBP18.98■□□□□ 0.63
SF1-211ENST00000448404 IL13P35225 146 aa18.98■□□□□ 0.63
SF1-211ENST00000448404 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
SF1-211ENST00000448404 ACEP12821 1306 aa18.97■□□□□ 0.63
SF1-211ENST00000448404 TMEM57Q8N5G2 664 aa18.97■□□□□ 0.63
SF1-211ENST00000448404 PDZRN3Q9UPQ7 1066 aa18.97■□□□□ 0.63
SF1-211ENST00000448404 MVPQ14764 893 aaKnown RBP18.97■□□□□ 0.63
SF1-211ENST00000448404 KRT24Q2M2I5 525 aa18.97■□□□□ 0.63
SF1-211ENST00000448404 ADGRB2O60241 1585 aa18.97■□□□□ 0.63
SF1-211ENST00000448404 REREQ9P2R6 1566 aa18.97■□□□□ 0.63
SF1-211ENST00000448404 CPSF1Q10570 1443 aaKnown RBP18.96■□□□□ 0.63
SF1-211ENST00000448404 FCHSD2O94868 740 aa18.96■□□□□ 0.63
SF1-211ENST00000448404 HSP90AB2PQ58FF8 381 aa18.95■□□□□ 0.62
SF1-211ENST00000448404 C1orf115Q9H7X2 142 aa18.95■□□□□ 0.62
SF1-211ENST00000448404 MAP2P11137 1827 aaKnown RBP18.95■□□□□ 0.62
SF1-211ENST00000448404 ADAMTS13Q76LX8 1427 aa18.95■□□□□ 0.62
SF1-211ENST00000448404 AMOTL2Q9Y2J4 779 aa18.94■□□□□ 0.62
SF1-211ENST00000448404 PTPRUQ92729 1446 aa18.93■□□□□ 0.62
SF1-211ENST00000448404 SULT6B1Q6IMI4 303 aa18.93■□□□□ 0.62
SF1-211ENST00000448404 ATF7IPQ6VMQ6 1270 aa18.93■□□□□ 0.62
SF1-211ENST00000448404 NFE2L2Q16236 605 aa18.92■□□□□ 0.62
SF1-211ENST00000448404 EDC4Q6P2E9 1401 aaKnown RBP18.92■□□□□ 0.62
SF1-211ENST00000448404 ATP7BP35670 1465 aa18.92■□□□□ 0.62
SF1-211ENST00000448404 KIF20BQ96Q89 1820 aa18.91■□□□□ 0.62
SF1-211ENST00000448404 NEFMP07197 916 aa18.91■□□□□ 0.62
SF1-211ENST00000448404 MBIPQ9NS73 344 aa18.91■□□□□ 0.62
SF1-211ENST00000448404 DLC1Q96QB1 1528 aa18.91■□□□□ 0.62
SF1-211ENST00000448404 MED14O60244 1454 aa18.91■□□□□ 0.62
SF1-211ENST00000448404 C8orf58Q8NAV2 365 aa18.91■□□□□ 0.62
SF1-211ENST00000448404 MIS18AQ9NYP9 233 aa18.91■□□□□ 0.62
SF1-211ENST00000448404 TTC21BQ7Z4L5 1316 aa18.91■□□□□ 0.62
SF1-211ENST00000448404 HDGFP51858 240 aaKnown RBP18.9■□□□□ 0.62
SF1-211ENST00000448404 EIF4A2Q14240 407 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms