RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
SCAP-208ENST00000448217 MIER1Q8N108 512 aa16.24■□□□□ 0.19
SCAP-208ENST00000448217 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
SCAP-208ENST00000448217 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
SCAP-208ENST00000448217 NPHP3Q7Z494 1330 aa16.22■□□□□ 0.19
SCAP-208ENST00000448217 NHSL1Q5SYE7 1610 aa16.22■□□□□ 0.19
SCAP-208ENST00000448217 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
SCAP-208ENST00000448217 CCER2I3L3R5 266 aa16.21■□□□□ 0.19
SCAP-208ENST00000448217 CC2D1BQ5T0F9 858 aaKnown RBP16.21■□□□□ 0.19
SCAP-208ENST00000448217 SBNO1A3KN83 1393 aa16.21■□□□□ 0.19
SCAP-208ENST00000448217 PXDNQ92626 1479 aa16.21■□□□□ 0.19
SCAP-208ENST00000448217 PIK3C2AO00443 1686 aa16.21■□□□□ 0.18
SCAP-208ENST00000448217 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
SCAP-208ENST00000448217 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
SCAP-208ENST00000448217 FOXO3O43524 673 aa16.2■□□□□ 0.18
SCAP-208ENST00000448217 PSME1Q06323 249 aa16.2■□□□□ 0.18
SCAP-208ENST00000448217 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
SCAP-208ENST00000448217 ALS2Q96Q42 1657 aa16.19■□□□□ 0.18
SCAP-208ENST00000448217 CERKQ8TCT0 537 aa16.19■□□□□ 0.18
SCAP-208ENST00000448217 SOS2Q07890 1332 aaPredicted RBP16.19■□□□□ 0.18
SCAP-208ENST00000448217 TOM1O60784 492 aa16.18■□□□□ 0.18
SCAP-208ENST00000448217 KRT28Q7Z3Y7 464 aa16.18■□□□□ 0.18
SCAP-208ENST00000448217 NME9Q86XW9 330 aa16.18■□□□□ 0.18
SCAP-208ENST00000448217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCAP-208ENST00000448217 MARF1Q9Y4F3 1742 aaKnown RBP16.18■□□□□ 0.18
SCAP-208ENST00000448217 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
SCAP-208ENST00000448217 ROBO1Q9Y6N7 1651 aa16.18■□□□□ 0.18
SCAP-208ENST00000448217 MORC1Q86VD1 984 aa16.17■□□□□ 0.18
SCAP-208ENST00000448217 GGNBP2Q9H3C7 697 aa16.17■□□□□ 0.18
SCAP-208ENST00000448217 AATKQ6ZMQ8 1374 aa16.16■□□□□ 0.18
SCAP-208ENST00000448217 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
SCAP-208ENST00000448217 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
SCAP-208ENST00000448217 COG3Q96JB2 828 aa16.15■□□□□ 0.18
SCAP-208ENST00000448217 TNS3Q68CZ2 1445 aa16.14■□□□□ 0.17
SCAP-208ENST00000448217 SPATA31A3Q5VYP0 1347 aa16.13■□□□□ 0.17
SCAP-208ENST00000448217 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
SCAP-208ENST00000448217 SMG6Q86US8 1419 aaKnown RBP16.12■□□□□ 0.17
SCAP-208ENST00000448217 ABTB2Q8N961 1025 aa16.12■□□□□ 0.17
SCAP-208ENST00000448217 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
SCAP-208ENST00000448217 SLIT3O75094 1523 aa16.12■□□□□ 0.17
SCAP-208ENST00000448217 USP19O94966 1318 aa16.12■□□□□ 0.17
SCAP-208ENST00000448217 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
SCAP-208ENST00000448217 ARHGEF10O15013 1369 aa16.12■□□□□ 0.17
SCAP-208ENST00000448217 NLRP6P59044 892 aa16.11■□□□□ 0.17
SCAP-208ENST00000448217 UBAP1LF5GYI3 381 aa16.1■□□□□ 0.17
SCAP-208ENST00000448217 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
SCAP-208ENST00000448217 XPCQ01831 940 aaPredicted RBP16.1■□□□□ 0.17
SCAP-208ENST00000448217 DDX17Q92841 729 aaKnown RBP16.1■□□□□ 0.17
SCAP-208ENST00000448217 CRYBG1Q9Y4K1 1723 aa16.1■□□□□ 0.17
SCAP-208ENST00000448217 INSRP06213 1382 aa16.1■□□□□ 0.17
SCAP-208ENST00000448217 CNGB1Q14028 1251 aaPredicted RBP16.09■□□□□ 0.17
SCAP-208ENST00000448217 KIF24Q5T7B8 1368 aa16.08■□□□□ 0.16
SCAP-208ENST00000448217 PNPLA6Q8IY17 1366 aa16.08■□□□□ 0.16
SCAP-208ENST00000448217 NFAT5O94916 1531 aa16.08■□□□□ 0.16
SCAP-208ENST00000448217 COL16A1Q07092 1604 aaPredicted RBP16.08■□□□□ 0.16
SCAP-208ENST00000448217 PHRF1Q9P1Y6 1649 aaKnown RBP16.08■□□□□ 0.16
SCAP-208ENST00000448217 KCNH5Q8NCM2 988 aa16.07■□□□□ 0.16
SCAP-208ENST00000448217 PHLPP1O60346 1717 aa16.06■□□□□ 0.16
SCAP-208ENST00000448217 CDK12Q9NYV4 1490 aaPredicted RBP16.06■□□□□ 0.16
SCAP-208ENST00000448217 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
SCAP-208ENST00000448217 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
SCAP-208ENST00000448217 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
SCAP-208ENST00000448217 COL22A1Q8NFW1 1626 aaPredicted RBP16.05■□□□□ 0.16
SCAP-208ENST00000448217 MTHFSP49914 203 aa16.05■□□□□ 0.16
SCAP-208ENST00000448217 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
SCAP-208ENST00000448217 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
SCAP-208ENST00000448217 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
SCAP-208ENST00000448217 GCP02774 474 aa16.03■□□□□ 0.16
SCAP-208ENST00000448217 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
SCAP-208ENST00000448217 ABCA3Q99758 1704 aa16.02■□□□□ 0.16
SCAP-208ENST00000448217 RTL1A6NKG5 1358 aa16.02■□□□□ 0.16
SCAP-208ENST00000448217 NUTM2GQ5VZR2 741 aa16.02■□□□□ 0.16
SCAP-208ENST00000448217 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
SCAP-208ENST00000448217 ABCC6O95255 1503 aa16.02■□□□□ 0.15
SCAP-208ENST00000448217 LTN1O94822 1766 aa16.02■□□□□ 0.15
SCAP-208ENST00000448217 PEAK1Q9H792 1746 aa16.02■□□□□ 0.15
SCAP-208ENST00000448217 MAP3K19Q56UN5 1328 aa16.01■□□□□ 0.15
SCAP-208ENST00000448217 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
SCAP-208ENST00000448217 SHPRHQ149N8 1683 aa16.01■□□□□ 0.15
SCAP-208ENST00000448217 CPDO75976 1380 aa16■□□□□ 0.15
SCAP-208ENST00000448217 FBLN1P23142 703 aa16■□□□□ 0.15
SCAP-208ENST00000448217 LMOD2Q6P5Q4 547 aa16■□□□□ 0.15
SCAP-208ENST00000448217 ARHGEF25Q86VW2 580 aa16■□□□□ 0.15
SCAP-208ENST00000448217 EMILIN1Q9Y6C2 1016 aa16■□□□□ 0.15
SCAP-208ENST00000448217 FLT4P35916 1363 aa16■□□□□ 0.15
SCAP-208ENST00000448217 RRS1Q15050 365 aaKnown RBP15.99■□□□□ 0.15
SCAP-208ENST00000448217 COL18A1P39060 1754 aa15.98■□□□□ 0.15
SCAP-208ENST00000448217 IP6K1Q92551 441 aa15.97■□□□□ 0.15
SCAP-208ENST00000448217 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
SCAP-208ENST00000448217 DIAPH1O60610 1272 aaKnown RBP15.95■□□□□ 0.14
SCAP-208ENST00000448217 HOXC9P31274 260 aa15.95■□□□□ 0.14
SCAP-208ENST00000448217 IL13P35225 146 aa15.94■□□□□ 0.14
SCAP-208ENST00000448217 AMPHP49418 695 aa15.94■□□□□ 0.14
SCAP-208ENST00000448217 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
SCAP-208ENST00000448217 JCADQ9P266 1359 aa15.94■□□□□ 0.14
SCAP-208ENST00000448217 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
SCAP-208ENST00000448217 SOX12O15370 315 aa15.93■□□□□ 0.14
SCAP-208ENST00000448217 HSP90AB2PQ58FF8 381 aa15.93■□□□□ 0.14
SCAP-208ENST00000448217 CABLES1Q8TDN4 633 aa15.93■□□□□ 0.14
SCAP-208ENST00000448217 LMO7Q8WWI1 1683 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms