RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
SSXP3-201ENST00000442971 TOMM70O94826 608 aa11.98□□□□□ -0.49
SSXP3-201ENST00000442971 YBX3P16989 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
SSXP3-201ENST00000442971 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
SSXP3-201ENST00000442971 BCL11BQ9C0K0 894 aaPredicted RBP11.98□□□□□ -0.49
SSXP3-201ENST00000442971 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
SSXP3-201ENST00000442971 BTG4Q9NY30 223 aa11.97□□□□□ -0.49
SSXP3-201ENST00000442971 KIAA1210Q9ULL0 1709 aa11.97□□□□□ -0.49
SSXP3-201ENST00000442971 LRPPRCP42704 1394 aaKnown RBP11.97□□□□□ -0.49
SSXP3-201ENST00000442971 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.5
SSXP3-201ENST00000442971 RGPD4Q7Z3J3 1758 aa11.96□□□□□ -0.5
SSXP3-201ENST00000442971 PLSCR1O15162 318 aa11.95□□□□□ -0.5
SSXP3-201ENST00000442971 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
SSXP3-201ENST00000442971 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
SSXP3-201ENST00000442971 KANK1Q14678 1352 aa11.94□□□□□ -0.5
SSXP3-201ENST00000442971 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
SSXP3-201ENST00000442971 STK32BQ9NY57 414 aa11.93□□□□□ -0.5
SSXP3-201ENST00000442971 METP08581 1390 aa11.93□□□□□ -0.5
SSXP3-201ENST00000442971 LMTK2Q8IWU2 1503 aa11.92□□□□□ -0.5
SSXP3-201ENST00000442971 DUOX2Q9NRD8 1548 aa11.92□□□□□ -0.5
SSXP3-201ENST00000442971 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
SSXP3-201ENST00000442971 USP19O94966 1318 aa11.92□□□□□ -0.5
SSXP3-201ENST00000442971 SLC15A2Q16348 729 aa11.91□□□□□ -0.5
SSXP3-201ENST00000442971 RGS19P49795 217 aa11.9□□□□□ -0.5
SSXP3-201ENST00000442971 ABCA3Q99758 1704 aa11.9□□□□□ -0.5
SSXP3-201ENST00000442971 NRXN3Q9Y4C0 1643 aa11.9□□□□□ -0.5
SSXP3-201ENST00000442971 PROM2Q8N271 834 aa11.89□□□□□ -0.51
SSXP3-201ENST00000442971 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
SSXP3-201ENST00000442971 RRBP1Q9P2E9 1410 aaKnown RBP11.87□□□□□ -0.51
SSXP3-201ENST00000442971 COL14A1Q05707 1796 aaKnown RBP11.86□□□□□ -0.51
SSXP3-201ENST00000442971 ARHGEF28Q8N1W1 1705 aaKnown RBP11.86□□□□□ -0.51
SSXP3-201ENST00000442971 UBTFP17480 764 aaKnown RBP11.86□□□□□ -0.51
SSXP3-201ENST00000442971 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
SSXP3-201ENST00000442971 ABHD8Q96I13 439 aa11.86□□□□□ -0.51
SSXP3-201ENST00000442971 CCDC144AA2RUR9 1427 aa11.85□□□□□ -0.51
SSXP3-201ENST00000442971 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
SSXP3-201ENST00000442971 PDE4DIPQ5VU43 2346 aa11.85□□□□□ -0.51
SSXP3-201ENST00000442971 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
SSXP3-201ENST00000442971 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
SSXP3-201ENST00000442971 C11orf95C9JLR9 678 aaPredicted RBP11.83□□□□□ -0.52
SSXP3-201ENST00000442971 POLD1P28340 1107 aa11.83□□□□□ -0.52
SSXP3-201ENST00000442971 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
SSXP3-201ENST00000442971 FSTL1Q12841 308 aa11.82□□□□□ -0.52
SSXP3-201ENST00000442971 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
SSXP3-201ENST00000442971 ROBO2Q9HCK4 1378 aa11.81□□□□□ -0.52
SSXP3-201ENST00000442971 EEA1Q15075 1411 aa11.81□□□□□ -0.52
SSXP3-201ENST00000442971 TNRC18O15417 2968 aaPredicted RBP11.81□□□□□ -0.52
SSXP3-201ENST00000442971 TXNRD1Q16881 649 aa11.8□□□□□ -0.52
SSXP3-201ENST00000442971 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
SSXP3-201ENST00000442971 CEP162Q5TB80 1403 aa11.8□□□□□ -0.52
SSXP3-201ENST00000442971 TULP4Q9NRJ4 1543 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 PSME1Q06323 249 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 BARGINQ6ZT62 677 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 USP35Q9P2H5 1018 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
SSXP3-201ENST00000442971 TECPR2O15040 1411 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
SSXP3-201ENST00000442971 CCDC85CA6NKD9 419 aa11.78□□□□□ -0.52
SSXP3-201ENST00000442971 PTF1AQ7RTS3 328 aa11.78□□□□□ -0.52
SSXP3-201ENST00000442971 NMRK2Q9NPI5 230 aa11.78□□□□□ -0.52
SSXP3-201ENST00000442971 FOXN1O15353 648 aa11.77□□□□□ -0.53
SSXP3-201ENST00000442971 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
SSXP3-201ENST00000442971 KIF1AQ12756 1690 aa11.76□□□□□ -0.53
SSXP3-201ENST00000442971 PMFBP1Q8TBY8 1022 aa11.76□□□□□ -0.53
SSXP3-201ENST00000442971 RRP7BPQ9NSQ0 103 aa11.76□□□□□ -0.53
SSXP3-201ENST00000442971 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
SSXP3-201ENST00000442971 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
SSXP3-201ENST00000442971 OVOS2A0A0J9YW53 1432 aa11.75□□□□□ -0.53
SSXP3-201ENST00000442971 OVOS2Q6IE36 1432 aa11.75□□□□□ -0.53
SSXP3-201ENST00000442971 SBNO1A3KN83 1393 aa11.75□□□□□ -0.53
SSXP3-201ENST00000442971 SLC16A10Q8TF71 515 aa11.75□□□□□ -0.53
SSXP3-201ENST00000442971 STRN4Q9NRL3 753 aa11.75□□□□□ -0.53
SSXP3-201ENST00000442971 HFM1A2PYH4 1435 aa11.74□□□□□ -0.53
SSXP3-201ENST00000442971 PEAK1Q9H792 1746 aa11.74□□□□□ -0.53
SSXP3-201ENST00000442971 TOPAZ1Q8N9V7 1692 aa11.74□□□□□ -0.53
SSXP3-201ENST00000442971 PRAG1Q86YV5 1406 aa11.74□□□□□ -0.53
SSXP3-201ENST00000442971 PRDM11Q9NQV5 511 aa11.72□□□□□ -0.53
SSXP3-201ENST00000442971 U3KPZ7 1027 aaPredicted RBP11.71□□□□□ -0.53
SSXP3-201ENST00000442971 IQGAP3Q86VI3 1631 aa11.71□□□□□ -0.53
SSXP3-201ENST00000442971 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
SSXP3-201ENST00000442971 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
SSXP3-201ENST00000442971 TCP11L2Q8N4U5 519 aa11.69□□□□□ -0.54
SSXP3-201ENST00000442971 PARP4Q9UKK3 1724 aaKnown RBP11.69□□□□□ -0.54
SSXP3-201ENST00000442971 NAIPQ13075 1403 aa11.68□□□□□ -0.54
SSXP3-201ENST00000442971 ATP7BP35670 1465 aa11.67□□□□□ -0.54
SSXP3-201ENST00000442971 PAPPAQ13219 1627 aa11.66□□□□□ -0.54
SSXP3-201ENST00000442971 DLL1O00548 723 aa11.66□□□□□ -0.54
SSXP3-201ENST00000442971 ZNF827Q17R98 1081 aa11.66□□□□□ -0.54
SSXP3-201ENST00000442971 PHF8Q9UPP1 1060 aa11.66□□□□□ -0.54
SSXP3-201ENST00000442971 LBX1P52954 281 aa11.65□□□□□ -0.54
SSXP3-201ENST00000442971 EVA1CP58658 441 aa11.65□□□□□ -0.54
SSXP3-201ENST00000442971 CHRNA2Q15822 529 aa11.65□□□□□ -0.54
SSXP3-201ENST00000442971 PRPF38BQ5VTL8 546 aaKnown RBP11.65□□□□□ -0.54
SSXP3-201ENST00000442971 SMC1BQ8NDV3 1235 aa11.65□□□□□ -0.54
SSXP3-201ENST00000442971 AIDAQ96BJ3 306 aa11.65□□□□□ -0.54
SSXP3-201ENST00000442971 THRAP3Q9Y2W1 955 aaKnown RBP11.64□□□□□ -0.55
SSXP3-201ENST00000442971 SSH2Q76I76 1423 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms