RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
NR1I3-211ENST00000442691 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
NR1I3-211ENST00000442691 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
NR1I3-211ENST00000442691 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
NR1I3-211ENST00000442691 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
NR1I3-211ENST00000442691 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
NR1I3-211ENST00000442691 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
NR1I3-211ENST00000442691 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
NR1I3-211ENST00000442691 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
NR1I3-211ENST00000442691 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
NR1I3-211ENST00000442691 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
NR1I3-211ENST00000442691 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
NR1I3-211ENST00000442691 DCCP43146 1447 aa12.31□□□□□ -0.44
NR1I3-211ENST00000442691 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
NR1I3-211ENST00000442691 RGL2O15211 777 aa12.31□□□□□ -0.44
NR1I3-211ENST00000442691 PLCB2Q00722 1185 aa12.31□□□□□ -0.44
NR1I3-211ENST00000442691 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
NR1I3-211ENST00000442691 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
NR1I3-211ENST00000442691 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
NR1I3-211ENST00000442691 NUBP1P53384 320 aa12.3□□□□□ -0.44
NR1I3-211ENST00000442691 GSE1Q14687 1217 aa12.3□□□□□ -0.44
NR1I3-211ENST00000442691 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
NR1I3-211ENST00000442691 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
NR1I3-211ENST00000442691 FMN2Q9NZ56 1722 aa12.29□□□□□ -0.44
NR1I3-211ENST00000442691 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
NR1I3-211ENST00000442691 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
NR1I3-211ENST00000442691 MON2Q7Z3U7 1717 aa12.28□□□□□ -0.44
NR1I3-211ENST00000442691 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-211ENST00000442691 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-211ENST00000442691 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
NR1I3-211ENST00000442691 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
NR1I3-211ENST00000442691 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
NR1I3-211ENST00000442691 DCAF8Q5TAQ9 597 aa12.27□□□□□ -0.45
NR1I3-211ENST00000442691 MRS2Q9HD23 443 aa12.27□□□□□ -0.45
NR1I3-211ENST00000442691 AKAP12Q02952 1782 aa12.26□□□□□ -0.45
NR1I3-211ENST00000442691 STRCQ7RTU9 1775 aa12.26□□□□□ -0.45
NR1I3-211ENST00000442691 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
NR1I3-211ENST00000442691 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
NR1I3-211ENST00000442691 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
NR1I3-211ENST00000442691 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
NR1I3-211ENST00000442691 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
NR1I3-211ENST00000442691 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
NR1I3-211ENST00000442691 USP6P35125 1406 aa12.23□□□□□ -0.45
NR1I3-211ENST00000442691 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
NR1I3-211ENST00000442691 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
NR1I3-211ENST00000442691 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
NR1I3-211ENST00000442691 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
NR1I3-211ENST00000442691 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
NR1I3-211ENST00000442691 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-211ENST00000442691 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
NR1I3-211ENST00000442691 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
NR1I3-211ENST00000442691 KIF1AQ12756 1690 aa12.21□□□□□ -0.45
NR1I3-211ENST00000442691 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
NR1I3-211ENST00000442691 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
NR1I3-211ENST00000442691 FYB1O15117 783 aa12.2□□□□□ -0.46
NR1I3-211ENST00000442691 HSPA2P54652 639 aa12.2□□□□□ -0.46
NR1I3-211ENST00000442691 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-211ENST00000442691 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-211ENST00000442691 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NR1I3-211ENST00000442691 ACEP12821 1306 aa12.19□□□□□ -0.46
NR1I3-211ENST00000442691 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
NR1I3-211ENST00000442691 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
NR1I3-211ENST00000442691 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
NR1I3-211ENST00000442691 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
NR1I3-211ENST00000442691 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
NR1I3-211ENST00000442691 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
NR1I3-211ENST00000442691 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
NR1I3-211ENST00000442691 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
NR1I3-211ENST00000442691 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
NR1I3-211ENST00000442691 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-211ENST00000442691 MST1RQ04912 1400 aa12.17□□□□□ -0.46
NR1I3-211ENST00000442691 MSH6P52701 1360 aa12.17□□□□□ -0.46
NR1I3-211ENST00000442691 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
NR1I3-211ENST00000442691 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
NR1I3-211ENST00000442691 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
NR1I3-211ENST00000442691 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
NR1I3-211ENST00000442691 HAP1P54257 671 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-211ENST00000442691 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
NR1I3-211ENST00000442691 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
NR1I3-211ENST00000442691 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
NR1I3-211ENST00000442691 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-211ENST00000442691 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
NR1I3-211ENST00000442691 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
NR1I3-211ENST00000442691 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
NR1I3-211ENST00000442691 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
NR1I3-211ENST00000442691 COG3Q96JB2 828 aa12.14□□□□□ -0.47
NR1I3-211ENST00000442691 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
NR1I3-211ENST00000442691 ATF3P18847 181 aa12.13□□□□□ -0.47
NR1I3-211ENST00000442691 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
NR1I3-211ENST00000442691 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
NR1I3-211ENST00000442691 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-211ENST00000442691 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-211ENST00000442691 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-211ENST00000442691 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
NR1I3-211ENST00000442691 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
NR1I3-211ENST00000442691 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-211ENST00000442691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR1I3-211ENST00000442691 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
NR1I3-211ENST00000442691 MTHFSP49914 203 aa12.1□□□□□ -0.47
NR1I3-211ENST00000442691 NME9Q86XW9 330 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms