RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KCNH5Q8NCM2 988 aa9.8□□□□□ -0.84
CDC42BPA-208ENST00000442054 TRPM2O94759 1503 aa9.8□□□□□ -0.84
CDC42BPA-208ENST00000442054 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-208ENST00000442054 GGNBP2Q9H3C7 697 aa9.79□□□□□ -0.84
CDC42BPA-208ENST00000442054 BRD4O60885 1362 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-208ENST00000442054 CC2D1BQ5T0F9 858 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-208ENST00000442054 RAPGEF4Q8WZA2 1011 aa9.79□□□□□ -0.84
CDC42BPA-208ENST00000442054 U2SURPO15042 1029 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-208ENST00000442054 CFAP53Q96M91 514 aa9.79□□□□□ -0.84
CDC42BPA-208ENST00000442054 RBM6P78332 1123 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 MRS2Q9HD23 443 aa9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 ATAD2Q6PL18 1390 aa9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 IRX6P78412 446 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 SIRT1Q96EB6 747 aa9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 TESK2Q96S53 571 aa9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 CLTCL1P53675 1640 aa9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 NEFLP07196 543 aa9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 FAM98CQ17RN3 349 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 KLHL34Q8N239 644 aa9.78□□□□□ -0.84
CDC42BPA-208ENST00000442054 DDX54Q8TDD1 881 aaKnown RBP9.77□□□□□ -0.84
CDC42BPA-208ENST00000442054 ADGRL3Q9HAR2 1447 aa9.77□□□□□ -0.84
CDC42BPA-208ENST00000442054 LRRC7Q96NW7 1537 aa9.77□□□□□ -0.85
CDC42BPA-208ENST00000442054 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
CDC42BPA-208ENST00000442054 MROH2AA6NES4 1674 aa9.77□□□□□ -0.85
CDC42BPA-208ENST00000442054 ARHGEF10O15013 1369 aa9.77□□□□□ -0.85
CDC42BPA-208ENST00000442054 NUDCQ9Y266 331 aa9.76□□□□□ -0.85
CDC42BPA-208ENST00000442054 FAM135BQ49AJ0 1406 aa9.75□□□□□ -0.85
CDC42BPA-208ENST00000442054 SYNMO15061 1565 aa9.75□□□□□ -0.85
CDC42BPA-208ENST00000442054 ARHGAP23Q9P227 1491 aa9.75□□□□□ -0.85
CDC42BPA-208ENST00000442054 GCP02774 474 aa9.75□□□□□ -0.85
CDC42BPA-208ENST00000442054 CGNL1Q0VF96 1302 aa9.75□□□□□ -0.85
CDC42BPA-208ENST00000442054 ZFYVE9O95405 1425 aa9.75□□□□□ -0.85
CDC42BPA-208ENST00000442054 NKTRP30414 1462 aaKnown RBP9.75□□□□□ -0.85
CDC42BPA-208ENST00000442054 EXOC5O00471 708 aa9.75□□□□□ -0.85
CDC42BPA-208ENST00000442054 NPHP1O15259 732 aa9.74□□□□□ -0.85
CDC42BPA-208ENST00000442054 FAM9BQ8IZU0 186 aa9.74□□□□□ -0.85
CDC42BPA-208ENST00000442054 SLIT1O75093 1534 aa9.74□□□□□ -0.85
CDC42BPA-208ENST00000442054 MED14O60244 1454 aa9.74□□□□□ -0.85
CDC42BPA-208ENST00000442054 NME9Q86XW9 330 aa9.74□□□□□ -0.85
CDC42BPA-208ENST00000442054 BAG6P46379 1132 aa9.73□□□□□ -0.85
CDC42BPA-208ENST00000442054 UNC5CLQ8IV45 518 aa9.73□□□□□ -0.85
CDC42BPA-208ENST00000442054 PANK3Q9H999 370 aa9.73□□□□□ -0.85
CDC42BPA-208ENST00000442054 MYBBP1AQ9BQG0 1328 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-208ENST00000442054 DDB1Q16531 1140 aa9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 SPATA31A3Q5VYP0 1347 aa9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 PPP1R1BQ9UD71 204 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 NRXN1Q9ULB1 1477 aa9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 PPIP5K1Q6PFW1 1433 aa9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 BCL11BQ9C0K0 894 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 BCL11AQ9H165 835 aa9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 SIGLEC1Q9BZZ2 1709 aa9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 NCOA3Q9Y6Q9 1424 aa9.72□□□□□ -0.85
CDC42BPA-208ENST00000442054 TTC21BQ7Z4L5 1316 aa9.71□□□□□ -0.85
CDC42BPA-208ENST00000442054 TATP17735 454 aaPredicted RBP9.71□□□□□ -0.85
CDC42BPA-208ENST00000442054 PTPRUQ92729 1446 aa9.71□□□□□ -0.86
CDC42BPA-208ENST00000442054 B4GALNT3Q6L9W6 998 aa9.71□□□□□ -0.86
CDC42BPA-208ENST00000442054 SEPT12Q8IYM1 358 aa9.71□□□□□ -0.86
CDC42BPA-208ENST00000442054 ZNF330Q9Y3S2 320 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPA-208ENST00000442054 KIF1BO60333 1816 aa9.7□□□□□ -0.86
CDC42BPA-208ENST00000442054 RRS1Q15050 365 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-208ENST00000442054 GJD4Q96KN9 370 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPA-208ENST00000442054 SHPRHQ149N8 1683 aa9.7□□□□□ -0.86
CDC42BPA-208ENST00000442054 RALBP1Q15311 655 aa9.7□□□□□ -0.86
CDC42BPA-208ENST00000442054 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
CDC42BPA-208ENST00000442054 KRT27Q7Z3Y8 459 aa9.7□□□□□ -0.86
CDC42BPA-208ENST00000442054 WDR43Q15061 677 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDC42BPA-208ENST00000442054 VIRMAQ69YN4 1812 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-208ENST00000442054 C1orf141Q5JVX7 400 aa9.69□□□□□ -0.86
CDC42BPA-208ENST00000442054 FAM182BQ5T319 152 aa9.69□□□□□ -0.86
CDC42BPA-208ENST00000442054 POTEAQ6S8J7 498 aa9.69□□□□□ -0.86
CDC42BPA-208ENST00000442054 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
CDC42BPA-208ENST00000442054 PLEKHG3A1L390 1219 aa9.68□□□□□ -0.86
CDC42BPA-208ENST00000442054 TTC21AQ8NDW8 1320 aa9.68□□□□□ -0.86
CDC42BPA-208ENST00000442054 APBA3O96018 575 aa9.68□□□□□ -0.86
CDC42BPA-208ENST00000442054 PIK3C2GO75747 1445 aa9.68□□□□□ -0.86
CDC42BPA-208ENST00000442054 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
CDC42BPA-208ENST00000442054 TCP11L2Q8N4U5 519 aa9.68□□□□□ -0.86
CDC42BPA-208ENST00000442054 ZNF521Q96K83 1311 aa9.68□□□□□ -0.86
CDC42BPA-208ENST00000442054 ALKQ9UM73 1620 aa9.68□□□□□ -0.86
CDC42BPA-208ENST00000442054 SOS2Q07890 1332 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-208ENST00000442054 ANKRD24Q8TF21 1146 aa9.67□□□□□ -0.86
CDC42BPA-208ENST00000442054 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-208ENST00000442054 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
CDC42BPA-208ENST00000442054 PRR36Q9H6K5 1346 aa9.67□□□□□ -0.86
CDC42BPA-208ENST00000442054 KIAA0232Q92628 1395 aa9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 MYOM2P54296 1465 aa9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 PPLO60437 1756 aa9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 SOCS7O14512 581 aa9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 MAPK8IP3Q9UPT6 1336 aa9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 KDM5AP29375 1690 aaKnown RBP9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 U2AF1L5P0DN76 240 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 U2AF1Q01081 240 aaKnown RBP eCLIP9.66□□□□□ -0.867e-7■■■■□ 23.3
CDC42BPA-208ENST00000442054 ACSBG1Q96GR2 724 aa9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 PTCH1Q13635 1447 aa9.66□□□□□ -0.86
CDC42BPA-208ENST00000442054 USP32Q8NFA0 1604 aa9.65□□□□□ -0.86
CDC42BPA-208ENST00000442054 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.86
CDC42BPA-208ENST00000442054 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
CDC42BPA-208ENST00000442054 LARP1Q6PKG0 1096 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-208ENST00000442054 DCCP43146 1447 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms