RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 EVC2Q86UK5 1308 aa21.13■□□□□ 0.97
PMS1-213ENST00000441310 DIP2BQ9P265 1576 aa21.12■□□□□ 0.97
PMS1-213ENST00000441310 CGNL1Q0VF96 1302 aa21.11■□□□□ 0.97
PMS1-213ENST00000441310 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
PMS1-213ENST00000441310 ARHGAP31Q2M1Z3 1444 aa21.1■□□□□ 0.97
PMS1-213ENST00000441310 ISY1Q9ULR0 285 aaKnown RBP21.1■□□□□ 0.97
PMS1-213ENST00000441310 NEXMIFQ5QGS0 1516 aa21.1■□□□□ 0.97
PMS1-213ENST00000441310 SBNO2Q9Y2G9 1366 aa21.1■□□□□ 0.97
PMS1-213ENST00000441310 ESF1Q9H501 851 aaKnown RBP21.1■□□□□ 0.97
PMS1-213ENST00000441310 R3HCC1Q9Y3T6 440 aaKnown RBP21.1■□□□□ 0.97
PMS1-213ENST00000441310 RRP7AQ9Y3A4 280 aaKnown RBP21.09■□□□□ 0.97
PMS1-213ENST00000441310 GLI2P10070 1586 aa21.09■□□□□ 0.97
PMS1-213ENST00000441310 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
PMS1-213ENST00000441310 OFD1O75665 1012 aa21.08■□□□□ 0.97
PMS1-213ENST00000441310 MSNP26038 577 aaKnown RBP21.08■□□□□ 0.97
PMS1-213ENST00000441310 MYO5BQ9ULV0 1848 aa21.08■□□□□ 0.96
PMS1-213ENST00000441310 C22orf23Q9BZE7 217 aa21.08■□□□□ 0.96
PMS1-213ENST00000441310 NPC1L1Q9UHC9 1359 aa21.08■□□□□ 0.96
PMS1-213ENST00000441310 PIK3C2BO00750 1634 aa21.07■□□□□ 0.96
PMS1-213ENST00000441310 MTHFSP49914 203 aa21.07■□□□□ 0.96
PMS1-213ENST00000441310 ZSCAN30Q86W11 494 aa21.07■□□□□ 0.96
PMS1-213ENST00000441310 SETBP1Q9Y6X0 1596 aa21.07■□□□□ 0.96
PMS1-213ENST00000441310 QRICH2Q9H0J4 1663 aa21.07■□□□□ 0.96
PMS1-213ENST00000441310 WAPLQ7Z5K2 1190 aa21.06■□□□□ 0.96
PMS1-213ENST00000441310 PRDM10Q9NQV6 1147 aa21.06■□□□□ 0.96
PMS1-213ENST00000441310 HSCBQ8IWL3 235 aa21.06■□□□□ 0.96
PMS1-213ENST00000441310 ZHX1Q9UKY1 873 aaPredicted RBP21.06■□□□□ 0.96
PMS1-213ENST00000441310 DMRT2Q9Y5R5 561 aa21.06■□□□□ 0.96
PMS1-213ENST00000441310 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.05■□□□□ 0.96
PMS1-213ENST00000441310 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
PMS1-213ENST00000441310 NKTRP30414 1462 aaKnown RBP21.05■□□□□ 0.96
PMS1-213ENST00000441310 CCDC173Q0VFZ6 552 aa21.03■□□□□ 0.96
PMS1-213ENST00000441310 PDE3AQ14432 1141 aa21.03■□□□□ 0.96
PMS1-213ENST00000441310 TNPO1Q92973 898 aaKnown RBP21.03■□□□□ 0.96
PMS1-213ENST00000441310 TRMT2AQ8IZ69 625 aaKnown RBP21.03■□□□□ 0.96
PMS1-213ENST00000441310 PCDHB15Q9Y5E8 787 aa21.03■□□□□ 0.96
PMS1-213ENST00000441310 NASPP49321 788 aaPredicted RBP21.02■□□□□ 0.96
PMS1-213ENST00000441310 ZNF692Q9BU19 519 aaPredicted RBP21.02■□□□□ 0.96
PMS1-213ENST00000441310 PREX1Q8TCU6 1659 aa21.02■□□□□ 0.96
PMS1-213ENST00000441310 ANP32BQ92688 251 aaKnown RBP21.02■□□□□ 0.95
PMS1-213ENST00000441310 FGD1P98174 961 aa21.01■□□□□ 0.95
PMS1-213ENST00000441310 PMFBP1Q8TBY8 1022 aa21.01■□□□□ 0.95
PMS1-213ENST00000441310 MAP7D2Q96T17 732 aa21.01■□□□□ 0.95
PMS1-213ENST00000441310 MYO3AQ8NEV4 1616 aa21■□□□□ 0.95
PMS1-213ENST00000441310 TULP4Q9NRJ4 1543 aa21■□□□□ 0.95
PMS1-213ENST00000441310 CDK19Q9BWU1 502 aa20.99■□□□□ 0.95
PMS1-213ENST00000441310 TNNQ9UQP3 1299 aa20.99■□□□□ 0.95
PMS1-213ENST00000441310 UQCRHLA0A096LP55 91 aa20.99■□□□□ 0.95
PMS1-213ENST00000441310 E9PSI1 815 aa20.99■□□□□ 0.95
PMS1-213ENST00000441310 UQCRHP07919 91 aa20.99■□□□□ 0.95
PMS1-213ENST00000441310 FOXD4L1Q9NU39 408 aa20.99■□□□□ 0.95
PMS1-213ENST00000441310 TMEM131LA2VDJ0 1609 aa20.98■□□□□ 0.95
PMS1-213ENST00000441310 GBP4Q96PP9 640 aa20.98■□□□□ 0.95
PMS1-213ENST00000441310 CABP1Q9NZU7 370 aa20.98■□□□□ 0.95
PMS1-213ENST00000441310 YTHDC2Q9H6S0 1430 aaKnown RBP20.98■□□□□ 0.95
PMS1-213ENST00000441310 FBLN1P23142 703 aa20.97■□□□□ 0.95
PMS1-213ENST00000441310 PPP1R9BQ96SB3 815 aa20.97■□□□□ 0.95
PMS1-213ENST00000441310 ZC3H13Q5T200 1668 aaKnown RBP20.96■□□□□ 0.95
PMS1-213ENST00000441310 U2AF1L5P0DN76 240 aaPredicted RBP20.96■□□□□ 0.95
PMS1-213ENST00000441310 U2AF1Q01081 240 aaKnown RBP eCLIP20.96■□□□□ 0.95
PMS1-213ENST00000441310 XPCQ01831 940 aaPredicted RBP20.96■□□□□ 0.95
PMS1-213ENST00000441310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.96■□□□□ 0.95
PMS1-213ENST00000441310 A0A1W2PP64 1363 aa20.96■□□□□ 0.95
PMS1-213ENST00000441310 SMAP1Q8IYB5 467 aaPredicted RBP20.96■□□□□ 0.95
PMS1-213ENST00000441310 CLTCQ00610 1675 aaKnown RBP20.95■□□□□ 0.94
PMS1-213ENST00000441310 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.94
PMS1-213ENST00000441310 ANKRD36BQ8N2N9 1353 aa20.95■□□□□ 0.94
PMS1-213ENST00000441310 TXNDC2Q86VQ3 553 aa20.95■□□□□ 0.94
PMS1-213ENST00000441310 U2SURPO15042 1029 aaKnown RBP20.94■□□□□ 0.94
PMS1-213ENST00000441310 CEBPAP49715 358 aaPredicted RBP20.94■□□□□ 0.94
PMS1-213ENST00000441310 BCL2L13Q9BXK5 485 aa20.94■□□□□ 0.94
PMS1-213ENST00000441310 SKOR2Q2VWA4 1001 aaPredicted RBP20.94■□□□□ 0.94
PMS1-213ENST00000441310 TCP11L2Q8N4U5 519 aa20.94■□□□□ 0.94
PMS1-213ENST00000441310 ZFYVE9O95405 1425 aa20.94■□□□□ 0.94
PMS1-213ENST00000441310 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
PMS1-213ENST00000441310 RLBP1P12271 317 aa20.93■□□□□ 0.94
PMS1-213ENST00000441310 CFAP53Q96M91 514 aa20.93■□□□□ 0.94
PMS1-213ENST00000441310 TERF1P54274 439 aa20.93■□□□□ 0.94
PMS1-213ENST00000441310 POLR3AO14802 1390 aaPredicted RBP20.93■□□□□ 0.94
PMS1-213ENST00000441310 ZMYM3Q14202 1370 aa20.93■□□□□ 0.94
PMS1-213ENST00000441310 RIMS2Q9UQ26 1411 aa20.92■□□□□ 0.94
PMS1-213ENST00000441310 RWDD1Q9H446 243 aaPredicted RBP20.92■□□□□ 0.94
PMS1-213ENST00000441310 WWC1Q8IX03 1113 aa20.91■□□□□ 0.94
PMS1-213ENST00000441310 TERF2IPQ9NYB0 399 aa20.91■□□□□ 0.94
PMS1-213ENST00000441310 FYB1O15117 783 aa20.91■□□□□ 0.94
PMS1-213ENST00000441310 NCKAP5LQ9HCH0 1330 aa20.9■□□□□ 0.94
PMS1-213ENST00000441310 PTPRMP28827 1452 aa20.9■□□□□ 0.94
PMS1-213ENST00000441310 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
PMS1-213ENST00000441310 A2ML1A8K2U0 1454 aa20.9■□□□□ 0.94
PMS1-213ENST00000441310 DDIT3P35638 169 aa20.89■□□□□ 0.94
PMS1-213ENST00000441310 RUNDC1Q96C34 613 aa20.89■□□□□ 0.93
PMS1-213ENST00000441310 ALKQ9UM73 1620 aa20.89■□□□□ 0.93
PMS1-213ENST00000441310 NUTM2FA1L443 756 aa20.89■□□□□ 0.93
PMS1-213ENST00000441310 RAB3GAP1Q15042 981 aa20.88■□□□□ 0.93
PMS1-213ENST00000441310 DDX49Q9Y6V7 483 aaKnown RBP20.88■□□□□ 0.93
PMS1-213ENST00000441310 HDGFL2Q7Z4V5 671 aaPredicted RBP20.87■□□□□ 0.93
PMS1-213ENST00000441310 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
PMS1-213ENST00000441310 PUS7Q96PZ0 661 aaKnown RBP20.87■□□□□ 0.93
PMS1-213ENST00000441310 ZBTB7CA1YPR0 619 aa20.86■□□□□ 0.93
PMS1-213ENST00000441310 NCLP19338 710 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms