RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 MAP2P11137 1827 aaKnown RBP24.32■■□□□ 1.48
LRCH3-207ENST00000441090 NPM2Q86SE8 214 aaKnown RBP24.32■■□□□ 1.48
LRCH3-207ENST00000441090 METP08581 1390 aa24.31■■□□□ 1.48
LRCH3-207ENST00000441090 PANK1Q8TE04 598 aa24.31■■□□□ 1.48
LRCH3-207ENST00000441090 TMPOP42166 694 aaKnown RBP24.3■■□□□ 1.48
LRCH3-207ENST00000441090 UBR1Q8IWV7 1749 aa24.3■■□□□ 1.48
LRCH3-207ENST00000441090 DIAPH1O60610 1272 aaKnown RBP24.3■■□□□ 1.48
LRCH3-207ENST00000441090 CLUAP1Q96AJ1 413 aa24.3■■□□□ 1.48
LRCH3-207ENST00000441090 COG6Q9Y2V7 657 aa24.3■■□□□ 1.48
LRCH3-207ENST00000441090 TECPR2O15040 1411 aa24.29■■□□□ 1.48
LRCH3-207ENST00000441090 FRAT1Q92837 279 aaPredicted RBP24.29■■□□□ 1.48
LRCH3-207ENST00000441090 MAPK8IP3Q9UPT6 1336 aa24.29■■□□□ 1.48
LRCH3-207ENST00000441090 CPS1P31327 1500 aa24.28■■□□□ 1.48
LRCH3-207ENST00000441090 CPSF1Q10570 1443 aaKnown RBP24.28■■□□□ 1.48
LRCH3-207ENST00000441090 FAM135BQ49AJ0 1406 aa24.28■■□□□ 1.48
LRCH3-207ENST00000441090 AAMPQ13685 434 aa24.28■■□□□ 1.48
LRCH3-207ENST00000441090 WASLO00401 505 aaPredicted RBP24.27■■□□□ 1.48
LRCH3-207ENST00000441090 CT47B1P0C2W7 299 aaPredicted RBP24.27■■□□□ 1.48
LRCH3-207ENST00000441090 TRIM35Q9UPQ4 493 aa24.27■■□□□ 1.48
LRCH3-207ENST00000441090 TNRQ92752 1358 aa24.27■■□□□ 1.48
LRCH3-207ENST00000441090 MON2Q7Z3U7 1717 aa24.27■■□□□ 1.48
LRCH3-207ENST00000441090 EDC4Q6P2E9 1401 aaKnown RBP24.26■■□□□ 1.47
LRCH3-207ENST00000441090 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
LRCH3-207ENST00000441090 PNNQ9H307 717 aaKnown RBP24.26■■□□□ 1.47
LRCH3-207ENST00000441090 VIRMAQ69YN4 1812 aaKnown RBP24.26■■□□□ 1.47
LRCH3-207ENST00000441090 PPIP5K1Q6PFW1 1433 aa24.26■■□□□ 1.47
LRCH3-207ENST00000441090 IGHDP01880 384 aa24.25■■□□□ 1.47
LRCH3-207ENST00000441090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.25■■□□□ 1.47
LRCH3-207ENST00000441090 SIRT1Q96EB6 747 aa24.25■■□□□ 1.47
LRCH3-207ENST00000441090 FAM161AQ3B820 660 aa24.25■■□□□ 1.47
LRCH3-207ENST00000441090 LRRC7Q96NW7 1537 aa24.25■■□□□ 1.47
LRCH3-207ENST00000441090 AKAP12Q02952 1782 aa24.25■■□□□ 1.47
LRCH3-207ENST00000441090 IL16Q14005 1332 aa24.24■■□□□ 1.47
LRCH3-207ENST00000441090 BCL2L13Q9BXK5 485 aa24.23■■□□□ 1.47
LRCH3-207ENST00000441090 ITSN1Q15811 1721 aa24.23■■□□□ 1.47
LRCH3-207ENST00000441090 POLKQ9UBT6 870 aa24.22■■□□□ 1.47
LRCH3-207ENST00000441090 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
LRCH3-207ENST00000441090 RLBP1P12271 317 aa24.22■■□□□ 1.47
LRCH3-207ENST00000441090 C8orf34Q49A92 452 aa24.22■■□□□ 1.47
LRCH3-207ENST00000441090 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
LRCH3-207ENST00000441090 RGS3P49796 1198 aa24.21■■□□□ 1.47
LRCH3-207ENST00000441090 TSR2Q969E8 191 aaKnown RBP24.21■■□□□ 1.47
LRCH3-207ENST00000441090 FCHSD2O94868 740 aa24.2■■□□□ 1.47
LRCH3-207ENST00000441090 TNNQ9UQP3 1299 aa24.2■■□□□ 1.46
LRCH3-207ENST00000441090 RIPK4P57078 832 aa24.19■■□□□ 1.46
LRCH3-207ENST00000441090 C3P01024 1663 aa24.19■■□□□ 1.46
LRCH3-207ENST00000441090 EXOSC9Q06265 439 aaKnown RBP24.18■■□□□ 1.46
LRCH3-207ENST00000441090 NUDT16Q96DE0 195 aaKnown RBP24.18■■□□□ 1.46
LRCH3-207ENST00000441090 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
LRCH3-207ENST00000441090 CDK12Q9NYV4 1490 aaPredicted RBP24.17■■□□□ 1.46
LRCH3-207ENST00000441090 ZKSCAN2Q63HK3 967 aa24.17■■□□□ 1.46
LRCH3-207ENST00000441090 RSPH6AQ9H0K4 717 aa24.17■■□□□ 1.46
LRCH3-207ENST00000441090 AATKQ6ZMQ8 1374 aa24.16■■□□□ 1.46
LRCH3-207ENST00000441090 FBLN1P23142 703 aa24.16■■□□□ 1.46
LRCH3-207ENST00000441090 DDRGK1Q96HY6 314 aa24.16■■□□□ 1.46
LRCH3-207ENST00000441090 CCDC61Q9Y6R9 512 aa24.16■■□□□ 1.46
LRCH3-207ENST00000441090 ADAMTS13Q76LX8 1427 aa24.15■■□□□ 1.46
LRCH3-207ENST00000441090 PPM1GO15355 546 aaPredicted RBP24.14■■□□□ 1.45
LRCH3-207ENST00000441090 NME9Q86XW9 330 aa24.14■■□□□ 1.45
LRCH3-207ENST00000441090 MVPQ14764 893 aaKnown RBP24.13■■□□□ 1.45
LRCH3-207ENST00000441090 PCDHB15Q9Y5E8 787 aa24.13■■□□□ 1.45
LRCH3-207ENST00000441090 PRKAR2BP31323 418 aa24.13■■□□□ 1.45
LRCH3-207ENST00000441090 SMC4Q9NTJ3 1288 aa24.12■■□□□ 1.45
LRCH3-207ENST00000441090 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.12■■□□□ 1.45
LRCH3-207ENST00000441090 TOPAZ1Q8N9V7 1692 aa24.12■■□□□ 1.45
LRCH3-207ENST00000441090 DZIP1LQ8IYY4 767 aaKnown RBP24.11■■□□□ 1.45
LRCH3-207ENST00000441090 ROBO2Q9HCK4 1378 aa24.11■■□□□ 1.45
LRCH3-207ENST00000441090 NEFMP07197 916 aa24.11■■□□□ 1.45
LRCH3-207ENST00000441090 EMILIN1Q9Y6C2 1016 aa24.11■■□□□ 1.45
LRCH3-207ENST00000441090 PLEKHG1Q9ULL1 1385 aa24.11■■□□□ 1.45
LRCH3-207ENST00000441090 SSH1Q8WYL5 1049 aa24.1■■□□□ 1.45
LRCH3-207ENST00000441090 NCKAP5LQ9HCH0 1330 aa24.1■■□□□ 1.45
LRCH3-207ENST00000441090 NRKQ7Z2Y5 1582 aa24.1■■□□□ 1.45
LRCH3-207ENST00000441090 NBR1Q14596 966 aa24.1■■□□□ 1.45
LRCH3-207ENST00000441090 FTSJ3Q8IY81 847 aaKnown RBP24.1■■□□□ 1.45
LRCH3-207ENST00000441090 IL13P35225 146 aa24.09■■□□□ 1.45
LRCH3-207ENST00000441090 COG3Q96JB2 828 aa24.09■■□□□ 1.45
LRCH3-207ENST00000441090 PRR36Q9H6K5 1346 aa24.09■■□□□ 1.45
LRCH3-207ENST00000441090 DLG5Q8TDM6 1919 aa24.09■■□□□ 1.45
LRCH3-207ENST00000441090 ZNF692Q9BU19 519 aaPredicted RBP24.08■■□□□ 1.45
LRCH3-207ENST00000441090 ZRANB1Q9UGI0 708 aa24.08■■□□□ 1.45
LRCH3-207ENST00000441090 TRIM27P14373 513 aa24.07■■□□□ 1.44
LRCH3-207ENST00000441090 NFE2L2Q16236 605 aa24.07■■□□□ 1.44
LRCH3-207ENST00000441090 RWDD1Q9H446 243 aaPredicted RBP24.06■■□□□ 1.44
LRCH3-207ENST00000441090 HMOX1P09601 288 aa24.05■■□□□ 1.44
LRCH3-207ENST00000441090 LTKP29376 864 aa24.05■■□□□ 1.44
LRCH3-207ENST00000441090 ATF7IPQ6VMQ6 1270 aa24.05■■□□□ 1.44
LRCH3-207ENST00000441090 PHACTR3Q96KR7 559 aa24.05■■□□□ 1.44
LRCH3-207ENST00000441090 KIF16BQ96L93 1317 aa24.03■■□□□ 1.44
LRCH3-207ENST00000441090 ALDH1L2Q3SY69 923 aa24.03■■□□□ 1.44
LRCH3-207ENST00000441090 NOB1Q9ULX3 412 aaKnown RBP24.03■■□□□ 1.44
LRCH3-207ENST00000441090 DDX19BQ9UMR2 479 aa24.03■■□□□ 1.44
LRCH3-207ENST00000441090 SLIT1O75093 1534 aa24.01■■□□□ 1.43
LRCH3-207ENST00000441090 CALD1Q05682 793 aaKnown RBP24.01■■□□□ 1.43
LRCH3-207ENST00000441090 ZNF428Q96B54 188 aa24.01■■□□□ 1.43
LRCH3-207ENST00000441090 NALCNQ8IZF0 1738 aa24.01■■□□□ 1.43
LRCH3-207ENST00000441090 PDZRN3Q9UPQ7 1066 aa24.01■■□□□ 1.43
LRCH3-207ENST00000441090 RRS1Q15050 365 aaKnown RBP24■■□□□ 1.43
LRCH3-207ENST00000441090 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
LRCH3-207ENST00000441090 IPO8O15397 1037 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms