RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
HLA-DQB2-231ENST00000435145 KIF20BQ96Q89 1820 aa20.69■□□□□ 0.9
HLA-DQB2-231ENST00000435145 ZMYM3Q14202 1370 aa20.69■□□□□ 0.9
HLA-DQB2-231ENST00000435145 PPM1GO15355 546 aaPredicted RBP20.68■□□□□ 0.9
HLA-DQB2-231ENST00000435145 TMPOP42166 694 aaKnown RBP20.68■□□□□ 0.9
HLA-DQB2-231ENST00000435145 FAM69CQ0P6D2 419 aa20.68■□□□□ 0.9
HLA-DQB2-231ENST00000435145 CDK19Q9BWU1 502 aa20.68■□□□□ 0.9
HLA-DQB2-231ENST00000435145 IL16Q14005 1332 aa20.68■□□□□ 0.9
HLA-DQB2-231ENST00000435145 HDGFL2Q7Z4V5 671 aaPredicted RBP20.68■□□□□ 0.9
HLA-DQB2-231ENST00000435145 PMFBP1Q8TBY8 1022 aa20.68■□□□□ 0.9
HLA-DQB2-231ENST00000435145 TRIM35Q9UPQ4 493 aa20.68■□□□□ 0.9
HLA-DQB2-231ENST00000435145 ATP7BP35670 1465 aa20.67■□□□□ 0.9
HLA-DQB2-231ENST00000435145 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
HLA-DQB2-231ENST00000435145 PCDHB15Q9Y5E8 787 aa20.66■□□□□ 0.9
HLA-DQB2-231ENST00000435145 RIMS2Q9UQ26 1411 aa20.65■□□□□ 0.9
HLA-DQB2-231ENST00000435145 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
HLA-DQB2-231ENST00000435145 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
HLA-DQB2-231ENST00000435145 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
HLA-DQB2-231ENST00000435145 BCL2L13Q9BXK5 485 aa20.64■□□□□ 0.89
HLA-DQB2-231ENST00000435145 CABP1Q9NZU7 370 aa20.64■□□□□ 0.89
HLA-DQB2-231ENST00000435145 STAG3Q9UJ98 1225 aa20.63■□□□□ 0.89
HLA-DQB2-231ENST00000435145 DIAPH1O60610 1272 aaKnown RBP20.62■□□□□ 0.89
HLA-DQB2-231ENST00000435145 MVPQ14764 893 aaKnown RBP20.62■□□□□ 0.89
HLA-DQB2-231ENST00000435145 ZKSCAN2Q63HK3 967 aa20.62■□□□□ 0.89
HLA-DQB2-231ENST00000435145 NRXN3Q9Y4C0 1643 aa20.62■□□□□ 0.89
HLA-DQB2-231ENST00000435145 USP19O94966 1318 aa20.61■□□□□ 0.89
HLA-DQB2-231ENST00000435145 TSR2Q969E8 191 aaKnown RBP20.61■□□□□ 0.89
HLA-DQB2-231ENST00000435145 PNNQ9H307 717 aaKnown RBP20.6■□□□□ 0.89
HLA-DQB2-231ENST00000435145 NEFMP07197 916 aa20.6■□□□□ 0.89
HLA-DQB2-231ENST00000435145 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
HLA-DQB2-231ENST00000435145 TSPOAP1O95153 1857 aa20.59■□□□□ 0.89
HLA-DQB2-231ENST00000435145 DZIP1LQ8IYY4 767 aaKnown RBP20.59■□□□□ 0.89
HLA-DQB2-231ENST00000435145 LRRC7Q96NW7 1537 aa20.59■□□□□ 0.89
HLA-DQB2-231ENST00000435145 CPSF1Q10570 1443 aaKnown RBP20.58■□□□□ 0.89
HLA-DQB2-231ENST00000435145 FAM135BQ49AJ0 1406 aa20.58■□□□□ 0.88
HLA-DQB2-231ENST00000435145 FCHSD2O94868 740 aa20.58■□□□□ 0.88
HLA-DQB2-231ENST00000435145 RWDD1Q9H446 243 aaPredicted RBP20.58■□□□□ 0.88
HLA-DQB2-231ENST00000435145 WAPLQ7Z5K2 1190 aa20.57■□□□□ 0.88
HLA-DQB2-231ENST00000435145 RIPK4P57078 832 aa20.56■□□□□ 0.88
HLA-DQB2-231ENST00000435145 SSH1Q8WYL5 1049 aa20.56■□□□□ 0.88
HLA-DQB2-231ENST00000435145 POLKQ9UBT6 870 aa20.56■□□□□ 0.88
HLA-DQB2-231ENST00000435145 EDC4Q6P2E9 1401 aaKnown RBP20.55■□□□□ 0.88
HLA-DQB2-231ENST00000435145 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
HLA-DQB2-231ENST00000435145 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
HLA-DQB2-231ENST00000435145 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
HLA-DQB2-231ENST00000435145 KNDC1Q76NI1 1749 aa20.55■□□□□ 0.88
HLA-DQB2-231ENST00000435145 TRIM27P14373 513 aa20.54■□□□□ 0.88
HLA-DQB2-231ENST00000435145 SLC4A3P48751 1232 aa20.54■□□□□ 0.88
HLA-DQB2-231ENST00000435145 TECPR2O15040 1411 aa20.54■□□□□ 0.88
HLA-DQB2-231ENST00000435145 PPIP5K1Q6PFW1 1433 aa20.54■□□□□ 0.88
HLA-DQB2-231ENST00000435145 FTSJ3Q8IY81 847 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB2-231ENST00000435145 DAXXQ9UER7 740 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB2-231ENST00000435145 ATF7IPQ6VMQ6 1270 aa20.53■□□□□ 0.88
HLA-DQB2-231ENST00000435145 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.53■□□□□ 0.88
HLA-DQB2-231ENST00000435145 SIRT1Q96EB6 747 aa20.53■□□□□ 0.88
HLA-DQB2-231ENST00000435145 WASLO00401 505 aaPredicted RBP20.52■□□□□ 0.88
HLA-DQB2-231ENST00000435145 SEC24BO95487 1268 aa20.52■□□□□ 0.88
HLA-DQB2-231ENST00000435145 METP08581 1390 aa20.52■□□□□ 0.87
HLA-DQB2-231ENST00000435145 HDAC1Q13547 482 aaPredicted RBP20.51■□□□□ 0.87
HLA-DQB2-231ENST00000435145 CDK12Q9NYV4 1490 aaPredicted RBP20.51■□□□□ 0.87
HLA-DQB2-231ENST00000435145 AATKQ6ZMQ8 1374 aa20.51■□□□□ 0.87
HLA-DQB2-231ENST00000435145 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.51■□□□□ 0.87
HLA-DQB2-231ENST00000435145 DDX19BQ9UMR2 479 aa20.51■□□□□ 0.87
HLA-DQB2-231ENST00000435145 ALDH1L2Q3SY69 923 aa20.5■□□□□ 0.87
HLA-DQB2-231ENST00000435145 CPS1P31327 1500 aa20.5■□□□□ 0.87
HLA-DQB2-231ENST00000435145 BRPF1P55201 1214 aaPredicted RBP20.49■□□□□ 0.87
HLA-DQB2-231ENST00000435145 KIF16BQ96L93 1317 aa20.49■□□□□ 0.87
HLA-DQB2-231ENST00000435145 PRKAR2BP31323 418 aa20.49■□□□□ 0.87
HLA-DQB2-231ENST00000435145 NFKBIBQ15653 356 aa20.49■□□□□ 0.87
HLA-DQB2-231ENST00000435145 MON2Q7Z3U7 1717 aa20.49■□□□□ 0.87
HLA-DQB2-231ENST00000435145 MAP2P11137 1827 aaKnown RBP20.49■□□□□ 0.87
HLA-DQB2-231ENST00000435145 ZNF428Q96B54 188 aa20.48■□□□□ 0.87
HLA-DQB2-231ENST00000435145 NOB1Q9ULX3 412 aaKnown RBP20.48■□□□□ 0.87
HLA-DQB2-231ENST00000435145 IL13P35225 146 aa20.46■□□□□ 0.87
HLA-DQB2-231ENST00000435145 NFE2L2Q16236 605 aa20.46■□□□□ 0.87
HLA-DQB2-231ENST00000435145 IPO8O15397 1037 aaKnown RBP20.46■□□□□ 0.87
HLA-DQB2-231ENST00000435145 FBLN1P23142 703 aa20.46■□□□□ 0.87
HLA-DQB2-231ENST00000435145 MLECQ14165 292 aa20.45■□□□□ 0.86
HLA-DQB2-231ENST00000435145 ZBTB40Q9NUA8 1239 aa20.45■□□□□ 0.86
HLA-DQB2-231ENST00000435145 SMC5Q8IY18 1101 aa20.44■□□□□ 0.86
HLA-DQB2-231ENST00000435145 AKAP12Q02952 1782 aa20.44■□□□□ 0.86
HLA-DQB2-231ENST00000435145 C3P01024 1663 aa20.44■□□□□ 0.86
HLA-DQB2-231ENST00000435145 NME9Q86XW9 330 aa20.44■□□□□ 0.86
HLA-DQB2-231ENST00000435145 ITPRIPQ8IWB1 547 aa20.44■□□□□ 0.86
HLA-DQB2-231ENST00000435145 TMEM57Q8N5G2 664 aa20.44■□□□□ 0.86
HLA-DQB2-231ENST00000435145 PHACTR3Q96KR7 559 aa20.44■□□□□ 0.86
HLA-DQB2-231ENST00000435145 NUDT16Q96DE0 195 aaKnown RBP20.43■□□□□ 0.86
HLA-DQB2-231ENST00000435145 TBC1D32Q96NH3 1257 aa20.43■□□□□ 0.86
HLA-DQB2-231ENST00000435145 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
HLA-DQB2-231ENST00000435145 EMILIN1Q9Y6C2 1016 aa20.43■□□□□ 0.86
HLA-DQB2-231ENST00000435145 TXNDC2Q86VQ3 553 aa20.43■□□□□ 0.86
HLA-DQB2-231ENST00000435145 CCDC61Q9Y6R9 512 aa20.43■□□□□ 0.86
HLA-DQB2-231ENST00000435145 CALD1Q05682 793 aaKnown RBP20.42■□□□□ 0.86
HLA-DQB2-231ENST00000435145 KIF13AQ9H1H9 1805 aa20.41■□□□□ 0.86
HLA-DQB2-231ENST00000435145 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
HLA-DQB2-231ENST00000435145 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
HLA-DQB2-231ENST00000435145 TNRQ92752 1358 aa20.41■□□□□ 0.86
HLA-DQB2-231ENST00000435145 PIK3R4Q99570 1358 aa20.41■□□□□ 0.86
HLA-DQB2-231ENST00000435145 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
HLA-DQB2-231ENST00000435145 TMEM2Q9UHN6 1383 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms