RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 TMPOP42166 694 aaKnown RBP31.98■■■□□ 2.71
LMBR1-209ENST00000434453 KIF20BQ96Q89 1820 aa31.98■■■□□ 2.71
LMBR1-209ENST00000434453 TSR2Q969E8 191 aaKnown RBP31.97■■■□□ 2.71
LMBR1-209ENST00000434453 USP19O94966 1318 aa31.97■■■□□ 2.71
LMBR1-209ENST00000434453 CDK19Q9BWU1 502 aa31.95■■■□□ 2.71
LMBR1-209ENST00000434453 PMFBP1Q8TBY8 1022 aa31.94■■■□□ 2.7
LMBR1-209ENST00000434453 PNPLA6Q8IY17 1366 aa31.93■■■□□ 2.7
LMBR1-209ENST00000434453 SETD1AO15047 1707 aaKnown RBP31.93■■■□□ 2.7
LMBR1-209ENST00000434453 DIP2BQ9P265 1576 aa31.92■■■□□ 2.7
LMBR1-209ENST00000434453 REREQ9P2R6 1566 aa31.92■■■□□ 2.7
LMBR1-209ENST00000434453 TSPOAP1O95153 1857 aa31.91■■■□□ 2.7
LMBR1-209ENST00000434453 CABP1Q9NZU7 370 aa31.91■■■□□ 2.7
LMBR1-209ENST00000434453 CT47B1P0C2W7 299 aaPredicted RBP31.91■■■□□ 2.7
LMBR1-209ENST00000434453 SEC24BO95487 1268 aa31.9■■■□□ 2.7
LMBR1-209ENST00000434453 EXOSC9Q06265 439 aaKnown RBP31.9■■■□□ 2.7
LMBR1-209ENST00000434453 MVPQ14764 893 aaKnown RBP31.9■■■□□ 2.7
LMBR1-209ENST00000434453 A2ML1A8K2U0 1454 aa31.89■■■□□ 2.7
LMBR1-209ENST00000434453 HDGFL2Q7Z4V5 671 aaPredicted RBP31.89■■■□□ 2.7
LMBR1-209ENST00000434453 AGLP35573 1532 aa31.88■■■□□ 2.69
LMBR1-209ENST00000434453 FAM69CQ0P6D2 419 aa31.88■■■□□ 2.69
LMBR1-209ENST00000434453 DLC1Q96QB1 1528 aa31.87■■■□□ 2.69
LMBR1-209ENST00000434453 ZKSCAN2Q63HK3 967 aa31.87■■■□□ 2.69
LMBR1-209ENST00000434453 STAG3Q9UJ98 1225 aa31.87■■■□□ 2.69
LMBR1-209ENST00000434453 SPATA31D1Q6ZQQ2 1576 aa31.86■■■□□ 2.69
LMBR1-209ENST00000434453 DIAPH1O60610 1272 aaKnown RBP31.85■■■□□ 2.69
LMBR1-209ENST00000434453 CDC42BPGQ6DT37 1551 aa31.85■■■□□ 2.69
LMBR1-209ENST00000434453 DAXXQ9UER7 740 aaPredicted RBP31.85■■■□□ 2.69
LMBR1-209ENST00000434453 PDZRN3Q9UPQ7 1066 aa31.85■■■□□ 2.69
LMBR1-209ENST00000434453 IL16Q14005 1332 aa31.84■■■□□ 2.69
LMBR1-209ENST00000434453 DZIP1LQ8IYY4 767 aaKnown RBP31.84■■■□□ 2.69
LMBR1-209ENST00000434453 WAPLQ7Z5K2 1190 aa31.83■■■□□ 2.69
LMBR1-209ENST00000434453 SSH1Q8WYL5 1049 aa31.83■■■□□ 2.69
LMBR1-209ENST00000434453 RIPK4P57078 832 aa31.82■■■□□ 2.68
LMBR1-209ENST00000434453 NFKBIBQ15653 356 aa31.82■■■□□ 2.68
LMBR1-209ENST00000434453 SMC4Q9NTJ3 1288 aa31.82■■■□□ 2.68
LMBR1-209ENST00000434453 LRRC7Q96NW7 1537 aa31.82■■■□□ 2.68
LMBR1-209ENST00000434453 TRIM27P14373 513 aa31.81■■■□□ 2.68
LMBR1-209ENST00000434453 ZMYM3Q14202 1370 aa31.81■■■□□ 2.68
LMBR1-209ENST00000434453 RWDD1Q9H446 243 aaPredicted RBP31.81■■■□□ 2.68
LMBR1-209ENST00000434453 PPP6R1Q9UPN7 881 aa31.81■■■□□ 2.68
LMBR1-209ENST00000434453 MAP2P11137 1827 aaKnown RBP31.81■■■□□ 2.68
LMBR1-209ENST00000434453 RIMS2Q9UQ26 1411 aa31.8■■■□□ 2.68
LMBR1-209ENST00000434453 ATP7BP35670 1465 aa31.8■■■□□ 2.68
LMBR1-209ENST00000434453 FBLN1P23142 703 aa31.79■■■□□ 2.68
LMBR1-209ENST00000434453 FTSJ3Q8IY81 847 aaKnown RBP31.79■■■□□ 2.68
LMBR1-209ENST00000434453 NRXN3Q9Y4C0 1643 aa31.78■■■□□ 2.68
LMBR1-209ENST00000434453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.77■■■□□ 2.682e-6■■□□□ 12.3
LMBR1-209ENST00000434453 POLKQ9UBT6 870 aa31.77■■■□□ 2.68
LMBR1-209ENST00000434453 FCHSD2O94868 740 aa31.75■■■□□ 2.67
LMBR1-209ENST00000434453 FAM135BQ49AJ0 1406 aa31.74■■■□□ 2.67
LMBR1-209ENST00000434453 ATF7IPQ6VMQ6 1270 aa31.74■■■□□ 2.67
LMBR1-209ENST00000434453 RSPH6AQ9H0K4 717 aa31.74■■■□□ 2.67
LMBR1-209ENST00000434453 PNNQ9H307 717 aaKnown RBP31.72■■■□□ 2.67
LMBR1-209ENST00000434453 NOB1Q9ULX3 412 aaKnown RBP31.72■■■□□ 2.67
LMBR1-209ENST00000434453 CPSF1Q10570 1443 aaKnown RBP31.71■■■□□ 2.67
LMBR1-209ENST00000434453 PRKAR2BP31323 418 aa31.69■■■□□ 2.66
LMBR1-209ENST00000434453 HDAC1Q13547 482 aaPredicted RBP31.68■■■□□ 2.66
LMBR1-209ENST00000434453 ITPRIPQ8IWB1 547 aa31.68■■■□□ 2.66
LMBR1-209ENST00000434453 DDX19BQ9UMR2 479 aa31.68■■■□□ 2.66
LMBR1-209ENST00000434453 METP08581 1390 aa31.67■■■□□ 2.66
LMBR1-209ENST00000434453 MLECQ14165 292 aa31.67■■■□□ 2.66
LMBR1-209ENST00000434453 TMEM57Q8N5G2 664 aa31.66■■■□□ 2.66
LMBR1-209ENST00000434453 EDC4Q6P2E9 1401 aaKnown RBP31.65■■■□□ 2.66
LMBR1-209ENST00000434453 PHACTR3Q96KR7 559 aa31.65■■■□□ 2.66
LMBR1-209ENST00000434453 PPIP5K1Q6PFW1 1433 aa31.64■■■□□ 2.66
LMBR1-209ENST00000434453 WASLO00401 505 aaPredicted RBP31.64■■■□□ 2.66
LMBR1-209ENST00000434453 TBC1D32Q96NH3 1257 aa31.64■■■□□ 2.66
LMBR1-209ENST00000434453 EMILIN1Q9Y6C2 1016 aa31.64■■■□□ 2.66
LMBR1-209ENST00000434453 ZBTB40Q9NUA8 1239 aa31.63■■■□□ 2.65
LMBR1-209ENST00000434453 KIF16BQ96L93 1317 aa31.62■■■□□ 2.65
LMBR1-209ENST00000434453 NME9Q86XW9 330 aa31.62■■■□□ 2.65
LMBR1-209ENST00000434453 ALDH1L2Q3SY69 923 aa31.61■■■□□ 2.65
LMBR1-209ENST00000434453 ZRANB1Q9UGI0 708 aa31.61■■■□□ 2.65
LMBR1-209ENST00000434453 HMOX1P09601 288 aa31.61■■■□□ 2.65
LMBR1-209ENST00000434453 MON2Q7Z3U7 1717 aa31.61■■■□□ 2.65
LMBR1-209ENST00000434453 FRAT2O75474 233 aaPredicted RBP31.6■■■□□ 2.65
LMBR1-209ENST00000434453 IL13P35225 146 aa31.6■■■□□ 2.65
LMBR1-209ENST00000434453 KNDC1Q76NI1 1749 aa31.6■■■□□ 2.65
LMBR1-209ENST00000434453 CDK12Q9NYV4 1490 aaPredicted RBP31.59■■■□□ 2.65
LMBR1-209ENST00000434453 NFE2L2Q16236 605 aa31.59■■■□□ 2.65
LMBR1-209ENST00000434453 SMC5Q8IY18 1101 aa31.59■■■□□ 2.65
LMBR1-209ENST00000434453 CPS1P31327 1500 aa31.59■■■□□ 2.65
LMBR1-209ENST00000434453 TXNDC2Q86VQ3 553 aa31.59■■■□□ 2.65
LMBR1-209ENST00000434453 DLG5Q8TDM6 1919 aa31.58■■■□□ 2.65
LMBR1-209ENST00000434453 THUMPD2Q9BTF0 503 aaKnown RBP31.58■■■□□ 2.65
LMBR1-209ENST00000434453 NCKAP5LQ9HCH0 1330 aa31.57■■■□□ 2.64
LMBR1-209ENST00000434453 IPO8O15397 1037 aaKnown RBP31.57■■■□□ 2.64
LMBR1-209ENST00000434453 BRPF1P55201 1214 aaPredicted RBP31.56■■■□□ 2.64
LMBR1-209ENST00000434453 GSE1Q14687 1217 aa31.56■■■□□ 2.64
LMBR1-209ENST00000434453 AKAP12Q02952 1782 aa31.56■■■□□ 2.64
LMBR1-209ENST00000434453 AATKQ6ZMQ8 1374 aa31.56■■■□□ 2.64
LMBR1-209ENST00000434453 NUDT16Q96DE0 195 aaKnown RBP31.55■■■□□ 2.64
LMBR1-209ENST00000434453 TECPR2O15040 1411 aa31.54■■■□□ 2.64
LMBR1-209ENST00000434453 BECN1Q14457 450 aa31.54■■■□□ 2.64
LMBR1-209ENST00000434453 UPF2Q9HAU5 1272 aaKnown RBP31.54■■■□□ 2.64
LMBR1-209ENST00000434453 C3P01024 1663 aa31.54■■■□□ 2.64
LMBR1-209ENST00000434453 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.53■■■□□ 2.64
LMBR1-209ENST00000434453 ZNF428Q96B54 188 aa31.52■■■□□ 2.64
LMBR1-209ENST00000434453 VAMP4O75379 141 aa31.52■■■□□ 2.64
LMBR1-209ENST00000434453 TSPYL6Q8N831 410 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms