RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
RPE-206ENST00000429921 FRAT1Q92837 279 aaPredicted RBP13.24□□□□□ -0.29
RPE-206ENST00000429921 TSR2Q969E8 191 aaKnown RBP13.24□□□□□ -0.29
RPE-206ENST00000429921 AMOTL2Q9Y2J4 779 aa13.23□□□□□ -0.29
RPE-206ENST00000429921 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
RPE-206ENST00000429921 EID1Q9Y6B2 187 aa13.23□□□□□ -0.29
RPE-206ENST00000429921 E9PSI1 815 aa13.22□□□□□ -0.29
RPE-206ENST00000429921 POLKQ9UBT6 870 aa13.22□□□□□ -0.29
RPE-206ENST00000429921 ADAMTS13Q76LX8 1427 aa13.22□□□□□ -0.29
RPE-206ENST00000429921 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
RPE-206ENST00000429921 DIAPH1O60610 1272 aaKnown RBP13.21□□□□□ -0.29
RPE-206ENST00000429921 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
RPE-206ENST00000429921 NLRP1Q9C000 1473 aa13.21□□□□□ -0.29
RPE-206ENST00000429921 C3P01024 1663 aa13.21□□□□□ -0.29
RPE-206ENST00000429921 PTPRUQ92729 1446 aa13.21□□□□□ -0.29
RPE-206ENST00000429921 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
RPE-206ENST00000429921 USP32Q8NFA0 1604 aa13.21□□□□□ -0.3
RPE-206ENST00000429921 PANK1Q8TE04 598 aa13.2□□□□□ -0.3
RPE-206ENST00000429921 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
RPE-206ENST00000429921 NSD2O96028 1365 aa13.2□□□□□ -0.3
RPE-206ENST00000429921 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
RPE-206ENST00000429921 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
RPE-206ENST00000429921 CPS1P31327 1500 aa13.19□□□□□ -0.3
RPE-206ENST00000429921 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
RPE-206ENST00000429921 NINLQ9Y2I6 1382 aa13.19□□□□□ -0.3
RPE-206ENST00000429921 NUTM2GQ5VZR2 741 aa13.19□□□□□ -0.3
RPE-206ENST00000429921 CLUAP1Q96AJ1 413 aa13.19□□□□□ -0.3
RPE-206ENST00000429921 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
RPE-206ENST00000429921 ACEP12821 1306 aa13.18□□□□□ -0.3
RPE-206ENST00000429921 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
RPE-206ENST00000429921 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
RPE-206ENST00000429921 TMPOP42166 694 aaKnown RBP13.18□□□□□ -0.3
RPE-206ENST00000429921 RIPK4P57078 832 aa13.18□□□□□ -0.3
RPE-206ENST00000429921 PHACTR3Q96KR7 559 aa13.18□□□□□ -0.3
RPE-206ENST00000429921 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
RPE-206ENST00000429921 FER1L4A9Z1Z3 1794 aa13.18□□□□□ -0.3
RPE-206ENST00000429921 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
RPE-206ENST00000429921 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
RPE-206ENST00000429921 COG3Q96JB2 828 aa13.17□□□□□ -0.3
RPE-206ENST00000429921 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
RPE-206ENST00000429921 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
RPE-206ENST00000429921 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
RPE-206ENST00000429921 KCNA6P17658 529 aa13.16□□□□□ -0.3
RPE-206ENST00000429921 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
RPE-206ENST00000429921 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
RPE-206ENST00000429921 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
RPE-206ENST00000429921 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
RPE-206ENST00000429921 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
RPE-206ENST00000429921 CPSF1Q10570 1443 aaKnown RBP13.15□□□□□ -0.3
RPE-206ENST00000429921 TCERG1O14776 1098 aaKnown RBP13.14□□□□□ -0.31
RPE-206ENST00000429921 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
RPE-206ENST00000429921 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
RPE-206ENST00000429921 RARSP54136 660 aaKnown RBP13.13□□□□□ -0.31
RPE-206ENST00000429921 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
RPE-206ENST00000429921 ATP7BP35670 1465 aa13.13□□□□□ -0.31
RPE-206ENST00000429921 RLBP1P12271 317 aa13.13□□□□□ -0.31
RPE-206ENST00000429921 FAM135BQ49AJ0 1406 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
RPE-206ENST00000429921 DCTN1Q14203 1278 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 WDR63Q8IWG1 891 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
RPE-206ENST00000429921 EDC4Q6P2E9 1401 aaKnown RBP13.12□□□□□ -0.31
RPE-206ENST00000429921 FANCIQ9NVI1 1328 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 FAM83GA6ND36 823 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 ANKRD26Q9UPS8 1709 aa13.12□□□□□ -0.31
RPE-206ENST00000429921 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
RPE-206ENST00000429921 IL13P35225 146 aa13.11□□□□□ -0.31
RPE-206ENST00000429921 RGS3P49796 1198 aa13.11□□□□□ -0.31
RPE-206ENST00000429921 HSP90AB2PQ58FF8 381 aa13.11□□□□□ -0.31
RPE-206ENST00000429921 RIMS1Q86UR5 1692 aaKnown RBP13.11□□□□□ -0.31
RPE-206ENST00000429921 TECPR2O15040 1411 aa13.11□□□□□ -0.31
RPE-206ENST00000429921 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
RPE-206ENST00000429921 TBX22Q9Y458 520 aa13.1□□□□□ -0.31
RPE-206ENST00000429921 IGHDP01880 384 aa13.1□□□□□ -0.31
RPE-206ENST00000429921 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
RPE-206ENST00000429921 RGPD8O14715 1765 aaPredicted RBP13.1□□□□□ -0.31
RPE-206ENST00000429921 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
RPE-206ENST00000429921 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
RPE-206ENST00000429921 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
RPE-206ENST00000429921 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
RPE-206ENST00000429921 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
RPE-206ENST00000429921 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
RPE-206ENST00000429921 MED14O60244 1454 aa13.08□□□□□ -0.32
RPE-206ENST00000429921 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
RPE-206ENST00000429921 FCHSD2O94868 740 aa13.08□□□□□ -0.32
RPE-206ENST00000429921 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
RPE-206ENST00000429921 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
RPE-206ENST00000429921 SMC4Q9NTJ3 1288 aa13.07□□□□□ -0.32
RPE-206ENST00000429921 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
RPE-206ENST00000429921 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
RPE-206ENST00000429921 NGEFQ8N5V2 710 aa13.07□□□□□ -0.32
RPE-206ENST00000429921 SSH1Q8WYL5 1049 aa13.07□□□□□ -0.32
RPE-206ENST00000429921 NEFMP07197 916 aa13.06□□□□□ -0.32
RPE-206ENST00000429921 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
RPE-206ENST00000429921 ARHGAP23Q9P227 1491 aa13.06□□□□□ -0.32
RPE-206ENST00000429921 ITSN1Q15811 1721 aa13.06□□□□□ -0.32
RPE-206ENST00000429921 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms