RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 IL16Q14005 1332 aa13.33□□□□□ -0.28
ATP2C1-204ENST00000428331 C14orf93Q9H972 538 aaKnown RBP13.33□□□□□ -0.28
ATP2C1-204ENST00000428331 CDC45O75419 566 aa13.33□□□□□ -0.28
ATP2C1-204ENST00000428331 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATP2C1-204ENST00000428331 ALDH1L2Q3SY69 923 aa13.32□□□□□ -0.28
ATP2C1-204ENST00000428331 NUTM2DQ5VT03 806 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-204ENST00000428331 ZBTB40Q9NUA8 1239 aa13.32□□□□□ -0.28
ATP2C1-204ENST00000428331 RPGRIP1LQ68CZ1 1315 aa13.32□□□□□ -0.28
ATP2C1-204ENST00000428331 NOS1P29475 1434 aa13.32□□□□□ -0.28
ATP2C1-204ENST00000428331 IQGAP1P46940 1657 aa13.31□□□□□ -0.28
ATP2C1-204ENST00000428331 RAB3GAP1Q15042 981 aa13.31□□□□□ -0.28
ATP2C1-204ENST00000428331 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.31□□□□□ -0.28
ATP2C1-204ENST00000428331 ST18O60284 1047 aa13.31□□□□□ -0.28
ATP2C1-204ENST00000428331 PUS7Q96PZ0 661 aaKnown RBP13.31□□□□□ -0.28
ATP2C1-204ENST00000428331 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
ATP2C1-204ENST00000428331 RABEP1Q15276 862 aa13.3□□□□□ -0.28
ATP2C1-204ENST00000428331 PTMAP06454 111 aaKnown RBP13.3□□□□□ -0.28
ATP2C1-204ENST00000428331 API5Q9BZZ5 524 aaKnown RBP13.3□□□□□ -0.28
ATP2C1-204ENST00000428331 ELL2O00472 640 aaPredicted RBP13.29□□□□□ -0.28
ATP2C1-204ENST00000428331 ZSCAN30Q86W11 494 aa13.29□□□□□ -0.28
ATP2C1-204ENST00000428331 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
ATP2C1-204ENST00000428331 MCTP1Q6DN14 999 aa13.29□□□□□ -0.28
ATP2C1-204ENST00000428331 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
ATP2C1-204ENST00000428331 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
ATP2C1-204ENST00000428331 NLRP1Q9C000 1473 aa13.29□□□□□ -0.28
ATP2C1-204ENST00000428331 PKNOX2Q96KN3 472 aa13.29□□□□□ -0.28
ATP2C1-204ENST00000428331 GNAI1P63096 354 aa13.28□□□□□ -0.28
ATP2C1-204ENST00000428331 LMOD3Q0VAK6 560 aa13.28□□□□□ -0.28
ATP2C1-204ENST00000428331 MYOM2P54296 1465 aa13.28□□□□□ -0.28
ATP2C1-204ENST00000428331 KIAA1211Q6ZU35 1233 aa13.28□□□□□ -0.28
ATP2C1-204ENST00000428331 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
ATP2C1-204ENST00000428331 FCHSD2O94868 740 aa13.27□□□□□ -0.29
ATP2C1-204ENST00000428331 SSFA2P28290 1259 aa13.27□□□□□ -0.29
ATP2C1-204ENST00000428331 KLHL40Q2TBA0 621 aa13.27□□□□□ -0.29
ATP2C1-204ENST00000428331 TBC1D9Q6ZT07 1266 aa13.27□□□□□ -0.29
ATP2C1-204ENST00000428331 ZNF518AQ6AHZ1 1483 aa13.27□□□□□ -0.29
ATP2C1-204ENST00000428331 INTS3Q68E01 1043 aaKnown RBP13.27□□□□□ -0.29
ATP2C1-204ENST00000428331 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
ATP2C1-204ENST00000428331 CAVIN1Q6NZI2 390 aaKnown RBP13.26□□□□□ -0.29
ATP2C1-204ENST00000428331 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
ATP2C1-204ENST00000428331 CLTCL1P53675 1640 aa13.25□□□□□ -0.29
ATP2C1-204ENST00000428331 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
ATP2C1-204ENST00000428331 BAG4O95429 457 aaKnown RBP13.25□□□□□ -0.29
ATP2C1-204ENST00000428331 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
ATP2C1-204ENST00000428331 TRIM35Q9UPQ4 493 aa13.25□□□□□ -0.29
ATP2C1-204ENST00000428331 REC8O95072 547 aa13.25□□□□□ -0.29
ATP2C1-204ENST00000428331 APBB1O00213 710 aa13.24□□□□□ -0.29
ATP2C1-204ENST00000428331 ABCC1P33527 1531 aa13.24□□□□□ -0.29
ATP2C1-204ENST00000428331 DNTTIP2Q5QJE6 756 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-204ENST00000428331 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 ATAD2Q6PL18 1390 aa13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 MCCP23508 829 aa13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 CSPP1Q1MSJ5 1256 aa13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 GAS2L3Q86XJ1 694 aa13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 SYAP1Q96A49 352 aaPredicted RBP13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 MAP7D2Q96T17 732 aa13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 FANCAO15360 1455 aa13.23□□□□□ -0.29
ATP2C1-204ENST00000428331 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 MAP3K4Q9Y6R4 1608 aa13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 VIRMAQ69YN4 1812 aaKnown RBP13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 HMMRO75330 724 aa13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 HMOX1P09601 288 aa13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 TWISTNBQ3B726 338 aaPredicted RBP13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 TET3O43151 1660 aa13.22□□□□□ -0.29
ATP2C1-204ENST00000428331 PRPF40AO75400 957 aaKnown RBP13.21□□□□□ -0.29
ATP2C1-204ENST00000428331 ZMYND15Q9H091 742 aa13.21□□□□□ -0.29
ATP2C1-204ENST00000428331 NFE2L2Q16236 605 aa13.21□□□□□ -0.3
ATP2C1-204ENST00000428331 SHROOM2Q13796 1616 aa13.21□□□□□ -0.3
ATP2C1-204ENST00000428331 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 KIAA1210Q9ULL0 1709 aa13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 ZBTB7BO15156 539 aaPredicted RBP13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 ATP7AQ04656 1500 aa13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 CEP152O94986 1710 aa13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 FYB1O15117 783 aa13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 PLEKHF1Q96S99 279 aa13.2□□□□□ -0.3
ATP2C1-204ENST00000428331 MBD3O95983 291 aa13.19□□□□□ -0.3
ATP2C1-204ENST00000428331 MYOM1P52179 1685 aa13.19□□□□□ -0.3
ATP2C1-204ENST00000428331 PPP1R9BQ96SB3 815 aa13.19□□□□□ -0.3
ATP2C1-204ENST00000428331 UGGT1Q9NYU2 1555 aa13.18□□□□□ -0.3
ATP2C1-204ENST00000428331 OFD1O75665 1012 aa13.18□□□□□ -0.3
ATP2C1-204ENST00000428331 PRAM1Q96QH2 718 aa13.18□□□□□ -0.3
ATP2C1-204ENST00000428331 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
ATP2C1-204ENST00000428331 HS1BP3Q53T59 392 aa13.18□□□□□ -0.3
ATP2C1-204ENST00000428331 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
ATP2C1-204ENST00000428331 FOXD4L5Q5VV16 416 aaPredicted RBP13.18□□□□□ -0.3
ATP2C1-204ENST00000428331 FOXD4L4Q8WXT5 416 aaPredicted RBP13.18□□□□□ -0.3
ATP2C1-204ENST00000428331 PHF14O94880 888 aa13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 MRPL50Q8N5N7 158 aaKnown RBP13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 THUMPD2Q9BTF0 503 aaKnown RBP13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 VAMP4O75379 141 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms