RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 CANXP27824 592 aaKnown RBP24.93■■□□□ 1.58
SNX17-202ENST00000427123 SIRT1Q96EB6 747 aa24.93■■□□□ 1.58
SNX17-202ENST00000427123 NOP58Q9Y2X3 529 aaKnown RBP24.93■■□□□ 1.58
SNX17-202ENST00000427123 RARSP54136 660 aaKnown RBP24.92■■□□□ 1.58
SNX17-202ENST00000427123 IPO9Q96P70 1041 aaKnown RBP24.92■■□□□ 1.58
SNX17-202ENST00000427123 CPSF1Q10570 1443 aaKnown RBP24.92■■□□□ 1.58
SNX17-202ENST00000427123 EDC4Q6P2E9 1401 aaKnown RBP24.92■■□□□ 1.58
SNX17-202ENST00000427123 MON2Q7Z3U7 1717 aa24.92■■□□□ 1.58
SNX17-202ENST00000427123 WASLO00401 505 aaPredicted RBP24.91■■□□□ 1.58
SNX17-202ENST00000427123 TMEM2Q9UHN6 1383 aa24.91■■□□□ 1.58
SNX17-202ENST00000427123 PPIP5K1Q6PFW1 1433 aa24.91■■□□□ 1.58
SNX17-202ENST00000427123 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
SNX17-202ENST00000427123 MAPK8IP3Q9UPT6 1336 aa24.91■■□□□ 1.58
SNX17-202ENST00000427123 DIAPH1O60610 1272 aaKnown RBP24.9■■□□□ 1.58
SNX17-202ENST00000427123 ITSN1Q15811 1721 aa24.89■■□□□ 1.57
SNX17-202ENST00000427123 AKAP12Q02952 1782 aa24.88■■□□□ 1.57
SNX17-202ENST00000427123 PNNQ9H307 717 aaKnown RBP24.88■■□□□ 1.57
SNX17-202ENST00000427123 TMPOP42166 694 aaKnown RBP24.87■■□□□ 1.57
SNX17-202ENST00000427123 SKAP1Q86WV1 359 aa24.86■■□□□ 1.57
SNX17-202ENST00000427123 LRRC7Q96NW7 1537 aa24.86■■□□□ 1.57
SNX17-202ENST00000427123 MAP2P11137 1827 aaKnown RBP24.86■■□□□ 1.57
SNX17-202ENST00000427123 CT47B1P0C2W7 299 aaPredicted RBP24.86■■□□□ 1.57
SNX17-202ENST00000427123 TXNDC2Q86VQ3 553 aa24.86■■□□□ 1.57
SNX17-202ENST00000427123 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.86■■□□□ 1.57
SNX17-202ENST00000427123 AAMPQ13685 434 aa24.85■■□□□ 1.57
SNX17-202ENST00000427123 IL16Q14005 1332 aa24.84■■□□□ 1.57
SNX17-202ENST00000427123 PANK1Q8TE04 598 aa24.84■■□□□ 1.57
SNX17-202ENST00000427123 FRAT1Q92837 279 aaPredicted RBP24.83■■□□□ 1.57
SNX17-202ENST00000427123 CLUAP1Q96AJ1 413 aa24.83■■□□□ 1.57
SNX17-202ENST00000427123 ADAMTS13Q76LX8 1427 aa24.83■■□□□ 1.56
SNX17-202ENST00000427123 TRIM35Q9UPQ4 493 aa24.83■■□□□ 1.56
SNX17-202ENST00000427123 C3P01024 1663 aa24.83■■□□□ 1.56
SNX17-202ENST00000427123 COG6Q9Y2V7 657 aa24.82■■□□□ 1.56
SNX17-202ENST00000427123 CDK12Q9NYV4 1490 aaPredicted RBP24.82■■□□□ 1.56
SNX17-202ENST00000427123 NUDT16Q96DE0 195 aaKnown RBP24.81■■□□□ 1.56
SNX17-202ENST00000427123 POLKQ9UBT6 870 aa24.81■■□□□ 1.56
SNX17-202ENST00000427123 PLEKHG1Q9ULL1 1385 aa24.81■■□□□ 1.56
SNX17-202ENST00000427123 FCHSD2O94868 740 aa24.8■■□□□ 1.56
SNX17-202ENST00000427123 AATKQ6ZMQ8 1374 aa24.8■■□□□ 1.56
SNX17-202ENST00000427123 CCDC61Q9Y6R9 512 aa24.79■■□□□ 1.56
SNX17-202ENST00000427123 ZBTB47Q9UFB7 747 aaPredicted RBP24.79■■□□□ 1.56
SNX17-202ENST00000427123 TOPAZ1Q8N9V7 1692 aa24.79■■□□□ 1.56
SNX17-202ENST00000427123 PAK3O75914 559 aaPredicted RBP24.78■■□□□ 1.56
SNX17-202ENST00000427123 NPM2Q86SE8 214 aaKnown RBP24.78■■□□□ 1.56
SNX17-202ENST00000427123 ROBO2Q9HCK4 1378 aa24.78■■□□□ 1.56
SNX17-202ENST00000427123 RIPK4P57078 832 aa24.76■■□□□ 1.55
SNX17-202ENST00000427123 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.76■■□□□ 1.55
SNX17-202ENST00000427123 NME9Q86XW9 330 aa24.76■■□□□ 1.55
SNX17-202ENST00000427123 TSR2Q969E8 191 aaKnown RBP24.76■■□□□ 1.55
SNX17-202ENST00000427123 BCL2L13Q9BXK5 485 aa24.76■■□□□ 1.55
SNX17-202ENST00000427123 RSPH6AQ9H0K4 717 aa24.76■■□□□ 1.55
SNX17-202ENST00000427123 NRKQ7Z2Y5 1582 aa24.76■■□□□ 1.55
SNX17-202ENST00000427123 IGHDP01880 384 aa24.74■■□□□ 1.55
SNX17-202ENST00000427123 FAM161AQ3B820 660 aa24.74■■□□□ 1.55
SNX17-202ENST00000427123 VIRMAQ69YN4 1812 aaKnown RBP24.74■■□□□ 1.55
SNX17-202ENST00000427123 PPM1GO15355 546 aaPredicted RBP24.74■■□□□ 1.55
SNX17-202ENST00000427123 NEFMP07197 916 aa24.73■■□□□ 1.55
SNX17-202ENST00000427123 RLBP1P12271 317 aa24.73■■□□□ 1.55
SNX17-202ENST00000427123 EXOSC9Q06265 439 aaKnown RBP24.73■■□□□ 1.55
SNX17-202ENST00000427123 FER1L4A9Z1Z3 1794 aa24.73■■□□□ 1.55
SNX17-202ENST00000427123 SLIT1O75093 1534 aa24.73■■□□□ 1.55
SNX17-202ENST00000427123 ZNF692Q9BU19 519 aaPredicted RBP24.73■■□□□ 1.55
SNX17-202ENST00000427123 PRR36Q9H6K5 1346 aa24.72■■□□□ 1.55
SNX17-202ENST00000427123 PRKAR2BP31323 418 aa24.72■■□□□ 1.55
SNX17-202ENST00000427123 ZKSCAN2Q63HK3 967 aa24.72■■□□□ 1.55
SNX17-202ENST00000427123 PMFBP1Q8TBY8 1022 aa24.72■■□□□ 1.55
SNX17-202ENST00000427123 COG3Q96JB2 828 aa24.72■■□□□ 1.55
SNX17-202ENST00000427123 ARHGAP23Q9P227 1491 aa24.71■■□□□ 1.55
SNX17-202ENST00000427123 EMILIN1Q9Y6C2 1016 aa24.71■■□□□ 1.55
SNX17-202ENST00000427123 FBLN1P23142 703 aa24.7■■□□□ 1.54
SNX17-202ENST00000427123 RGS3P49796 1198 aa24.7■■□□□ 1.54
SNX17-202ENST00000427123 TNNQ9UQP3 1299 aa24.7■■□□□ 1.54
SNX17-202ENST00000427123 NCKAP5LQ9HCH0 1330 aa24.7■■□□□ 1.54
SNX17-202ENST00000427123 LTKP29376 864 aa24.69■■□□□ 1.54
SNX17-202ENST00000427123 C8orf34Q49A92 452 aa24.69■■□□□ 1.54
SNX17-202ENST00000427123 SMC4Q9NTJ3 1288 aa24.69■■□□□ 1.54
SNX17-202ENST00000427123 IL13P35225 146 aa24.69■■□□□ 1.54
SNX17-202ENST00000427123 MVPQ14764 893 aaKnown RBP24.68■■□□□ 1.54
SNX17-202ENST00000427123 ZRANB1Q9UGI0 708 aa24.68■■□□□ 1.54
SNX17-202ENST00000427123 NFE2L2Q16236 605 aa24.67■■□□□ 1.54
SNX17-202ENST00000427123 DZIP1LQ8IYY4 767 aaKnown RBP24.67■■□□□ 1.54
SNX17-202ENST00000427123 DIP2AQ14689 1571 aa24.66■■□□□ 1.54
SNX17-202ENST00000427123 FTSJ3Q8IY81 847 aaKnown RBP24.66■■□□□ 1.54
SNX17-202ENST00000427123 DDRGK1Q96HY6 314 aa24.66■■□□□ 1.54
SNX17-202ENST00000427123 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
SNX17-202ENST00000427123 PTPRUQ92729 1446 aa24.65■■□□□ 1.54
SNX17-202ENST00000427123 NALCNQ8IZF0 1738 aa24.65■■□□□ 1.54
SNX17-202ENST00000427123 SSH1Q8WYL5 1049 aa24.65■■□□□ 1.54
SNX17-202ENST00000427123 CEBPAP49715 358 aaPredicted RBP24.64■■□□□ 1.53
SNX17-202ENST00000427123 CALD1Q05682 793 aaKnown RBP24.64■■□□□ 1.53
SNX17-202ENST00000427123 PCDHB15Q9Y5E8 787 aa24.64■■□□□ 1.53
SNX17-202ENST00000427123 HMOX1P09601 288 aa24.63■■□□□ 1.53
SNX17-202ENST00000427123 PTCH1Q13635 1447 aa24.63■■□□□ 1.53
SNX17-202ENST00000427123 PLEKHG3A1L390 1219 aa24.62■■□□□ 1.53
SNX17-202ENST00000427123 DLG5Q8TDM6 1919 aa24.62■■□□□ 1.53
SNX17-202ENST00000427123 KIF16BQ96L93 1317 aa24.62■■□□□ 1.53
SNX17-202ENST00000427123 OVOS2A0A0J9YW53 1432 aa24.61■■□□□ 1.53
SNX17-202ENST00000427123 OVOS2Q6IE36 1432 aa24.61■■□□□ 1.53
SNX17-202ENST00000427123 PHACTR3Q96KR7 559 aa24.61■■□□□ 1.53
SNX17-202ENST00000427123 USP6P35125 1406 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms