RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
CMSS1-201ENST00000421999 NAP1L2Q9ULW6 460 aaPredicted RBP12.28□□□□□ -0.44
CMSS1-201ENST00000421999 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
CMSS1-201ENST00000421999 C19orf44Q9H6X5 657 aa12.28□□□□□ -0.44
CMSS1-201ENST00000421999 NINLQ9Y2I6 1382 aa12.28□□□□□ -0.44
CMSS1-201ENST00000421999 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.44
CMSS1-201ENST00000421999 METP08581 1390 aa12.27□□□□□ -0.44
CMSS1-201ENST00000421999 ISY1Q9ULR0 285 aaKnown RBP12.27□□□□□ -0.44
CMSS1-201ENST00000421999 UNC13BO14795 1591 aa12.27□□□□□ -0.45
CMSS1-201ENST00000421999 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.45
CMSS1-201ENST00000421999 ADAMTS2O95450 1211 aa12.27□□□□□ -0.45
CMSS1-201ENST00000421999 KCNH5Q8NCM2 988 aa12.27□□□□□ -0.45
CMSS1-201ENST00000421999 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
CMSS1-201ENST00000421999 FRAT2O75474 233 aaPredicted RBP12.27□□□□□ -0.45
CMSS1-201ENST00000421999 DIP2CQ9Y2E4 1556 aa12.27□□□□□ -0.45
CMSS1-201ENST00000421999 PUS7Q96PZ0 661 aaKnown RBP12.26□□□□□ -0.45
CMSS1-201ENST00000421999 TSPYL4Q9UJ04 414 aa12.26□□□□□ -0.45
CMSS1-201ENST00000421999 GNAI1P63096 354 aa12.26□□□□□ -0.45
CMSS1-201ENST00000421999 MSH6P52701 1360 aa12.26□□□□□ -0.45
CMSS1-201ENST00000421999 RRP1P56182 461 aaKnown RBP12.26□□□□□ -0.45
CMSS1-201ENST00000421999 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
CMSS1-201ENST00000421999 ABCC11Q96J66 1382 aa12.25□□□□□ -0.45
CMSS1-201ENST00000421999 GLI2P10070 1586 aa12.25□□□□□ -0.45
CMSS1-201ENST00000421999 A0A1W2PP64 1363 aa12.25□□□□□ -0.45
CMSS1-201ENST00000421999 FCHSD2O94868 740 aa12.25□□□□□ -0.45
CMSS1-201ENST00000421999 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
CMSS1-201ENST00000421999 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
CMSS1-201ENST00000421999 NEXNQ0ZGT2 675 aa12.25□□□□□ -0.45
CMSS1-201ENST00000421999 GAS2L2Q8NHY3 880 aa12.25□□□□□ -0.45
CMSS1-201ENST00000421999 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
CMSS1-201ENST00000421999 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
CMSS1-201ENST00000421999 USHBP1Q8N6Y0 703 aa12.24□□□□□ -0.45
CMSS1-201ENST00000421999 ORAI2Q96SN7 254 aa12.24□□□□□ -0.45
CMSS1-201ENST00000421999 COG6Q9Y2V7 657 aa12.24□□□□□ -0.45
CMSS1-201ENST00000421999 HMMRO75330 724 aa12.23□□□□□ -0.45
CMSS1-201ENST00000421999 EXOC6Q8TAG9 804 aa12.23□□□□□ -0.45
CMSS1-201ENST00000421999 ABCA6Q8N139 1617 aa12.23□□□□□ -0.45
CMSS1-201ENST00000421999 PLEKHO1Q53GL0 409 aaPredicted RBP12.23□□□□□ -0.45
CMSS1-201ENST00000421999 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
CMSS1-201ENST00000421999 NSD2O96028 1365 aa12.23□□□□□ -0.45
CMSS1-201ENST00000421999 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
CMSS1-201ENST00000421999 CLTCL1P53675 1640 aa12.23□□□□□ -0.45
CMSS1-201ENST00000421999 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
CMSS1-201ENST00000421999 BECN1Q14457 450 aa12.23□□□□□ -0.45
CMSS1-201ENST00000421999 ZKSCAN2Q63HK3 967 aa12.23□□□□□ -0.45
CMSS1-201ENST00000421999 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
CMSS1-201ENST00000421999 TMPOP42166 694 aaKnown RBP12.22□□□□□ -0.45
CMSS1-201ENST00000421999 EXOSC9Q06265 439 aaKnown RBP12.22□□□□□ -0.45
CMSS1-201ENST00000421999 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
CMSS1-201ENST00000421999 RWDD1Q9H446 243 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-201ENST00000421999 PIK3C2GO75747 1445 aa12.22□□□□□ -0.45
CMSS1-201ENST00000421999 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
CMSS1-201ENST00000421999 FKBP5Q13451 457 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-201ENST00000421999 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-201ENST00000421999 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
CMSS1-201ENST00000421999 ERICH6BQ5W0A0 696 aa12.22□□□□□ -0.45
CMSS1-201ENST00000421999 CRBNQ96SW2 442 aa12.22□□□□□ -0.45
CMSS1-201ENST00000421999 KDM5CP41229 1560 aa12.21□□□□□ -0.45
CMSS1-201ENST00000421999 AIMP1Q12904 312 aaKnown RBP12.21□□□□□ -0.45
CMSS1-201ENST00000421999 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.45
CMSS1-201ENST00000421999 MYOM2P54296 1465 aa12.21□□□□□ -0.45
CMSS1-201ENST00000421999 KIF1BO60333 1816 aa12.21□□□□□ -0.45
CMSS1-201ENST00000421999 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
CMSS1-201ENST00000421999 NLRP1Q9C000 1473 aa12.21□□□□□ -0.46
CMSS1-201ENST00000421999 PARD3Q8TEW0 1356 aa12.21□□□□□ -0.46
CMSS1-201ENST00000421999 PLEKHG1Q9ULL1 1385 aa12.21□□□□□ -0.46
CMSS1-201ENST00000421999 CHRNA2Q15822 529 aa12.21□□□□□ -0.46
CMSS1-201ENST00000421999 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.46
CMSS1-201ENST00000421999 WWC1Q8IX03 1113 aa12.21□□□□□ -0.46
CMSS1-201ENST00000421999 EIF5BO60841 1220 aaKnown RBP12.2□□□□□ -0.46
CMSS1-201ENST00000421999 CEP152O94986 1710 aa12.2□□□□□ -0.46
CMSS1-201ENST00000421999 DCTN1Q14203 1278 aa12.2□□□□□ -0.46
CMSS1-201ENST00000421999 CABLES1Q8TDN4 633 aa12.2□□□□□ -0.46
CMSS1-201ENST00000421999 POLKQ9UBT6 870 aa12.2□□□□□ -0.46
CMSS1-201ENST00000421999 A2ML1A8K2U0 1454 aa12.2□□□□□ -0.46
CMSS1-201ENST00000421999 TTC21AQ8NDW8 1320 aa12.2□□□□□ -0.46
CMSS1-201ENST00000421999 E9PCH4 1651 aa12.2□□□□□ -0.46
CMSS1-201ENST00000421999 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
CMSS1-201ENST00000421999 TOM1O60784 492 aa12.19□□□□□ -0.46
CMSS1-201ENST00000421999 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
CMSS1-201ENST00000421999 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
CMSS1-201ENST00000421999 KIAA1211Q6ZU35 1233 aa12.18□□□□□ -0.46
CMSS1-201ENST00000421999 MCM10Q7L590 875 aa12.18□□□□□ -0.46
CMSS1-201ENST00000421999 ANP32BQ92688 251 aaKnown RBP12.18□□□□□ -0.46
CMSS1-201ENST00000421999 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
CMSS1-201ENST00000421999 ROBO2Q9HCK4 1378 aa12.18□□□□□ -0.46
CMSS1-201ENST00000421999 FAM177BA6PVY3 158 aa12.17□□□□□ -0.46
CMSS1-201ENST00000421999 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
CMSS1-201ENST00000421999 SPHKAPQ2M3C7 1700 aa12.17□□□□□ -0.46
CMSS1-201ENST00000421999 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
CMSS1-201ENST00000421999 BCAR3O75815 825 aa12.17□□□□□ -0.46
CMSS1-201ENST00000421999 PANK1Q8TE04 598 aa12.17□□□□□ -0.46
CMSS1-201ENST00000421999 DDX17Q92841 729 aaKnown RBP12.17□□□□□ -0.46
CMSS1-201ENST00000421999 PPRC1Q5VV67 1664 aaKnown RBP12.17□□□□□ -0.46
CMSS1-201ENST00000421999 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
CMSS1-201ENST00000421999 MIS18AQ9NYP9 233 aa12.17□□□□□ -0.46
CMSS1-201ENST00000421999 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
CMSS1-201ENST00000421999 LMTK2Q8IWU2 1503 aa12.16□□□□□ -0.46
CMSS1-201ENST00000421999 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
CMSS1-201ENST00000421999 TWISTNBQ3B726 338 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms